Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07290 and CA264_07295 are separated by 691 nucleotides CA264_07295 and CA264_07300 are separated by 343 nucleotides
CA264_07290: CA264_07290 - mechanosensitive ion channel protein MscS, at 1,683,927 to 1,685,015
_07290
CA264_07295: CA264_07295 - helix-turn-helix transcriptional regulator, at 1,685,707 to 1,686,402
_07295
CA264_07300: CA264_07300 - TIGR00374 family protein, at 1,686,746 to 1,687,858
_07300
Position (kb)
1685
1686
1687 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1684.727 kb on - strand, within CA264_07290 at 1684.842 kb on + strand, within CA264_07290 at 1684.842 kb on + strand, within CA264_07290 at 1684.843 kb on - strand, within CA264_07290 at 1684.850 kb on - strand, within CA264_07290 at 1684.850 kb on - strand, within CA264_07290 at 1684.869 kb on + strand, within CA264_07290 at 1684.870 kb on - strand, within CA264_07290 at 1684.870 kb on - strand, within CA264_07290 at 1684.870 kb on - strand, within CA264_07290 at 1684.872 kb on - strand, within CA264_07290 at 1684.893 kb on - strand, within CA264_07290 at 1685.021 kb on - strand at 1685.035 kb on - strand at 1685.039 kb on + strand at 1685.039 kb on + strand at 1685.039 kb on + strand at 1685.090 kb on + strand at 1685.091 kb on - strand at 1685.144 kb on + strand at 1685.145 kb on - strand at 1685.175 kb on + strand at 1685.219 kb on + strand at 1685.219 kb on + strand at 1685.219 kb on + strand at 1685.224 kb on - strand at 1685.224 kb on - strand at 1685.279 kb on - strand at 1685.280 kb on + strand at 1685.298 kb on + strand at 1685.306 kb on + strand at 1685.307 kb on - strand at 1685.307 kb on - strand at 1685.309 kb on - strand at 1685.324 kb on - strand at 1685.338 kb on + strand at 1685.350 kb on + strand at 1685.397 kb on - strand at 1685.412 kb on + strand at 1685.412 kb on + strand at 1685.413 kb on - strand at 1685.413 kb on - strand at 1685.520 kb on - strand at 1685.520 kb on - strand at 1685.521 kb on + strand at 1685.521 kb on + strand at 1685.522 kb on - strand at 1685.608 kb on + strand at 1685.618 kb on + strand at 1685.618 kb on + strand at 1685.619 kb on - strand at 1685.619 kb on - strand at 1685.688 kb on + strand at 1685.704 kb on + strand at 1685.861 kb on - strand, within CA264_07295 at 1685.959 kb on + strand, within CA264_07295 at 1686.104 kb on + strand, within CA264_07295 at 1686.105 kb on - strand, within CA264_07295 at 1686.184 kb on + strand, within CA264_07295 at 1686.184 kb on + strand, within CA264_07295 at 1686.185 kb on - strand, within CA264_07295 at 1686.277 kb on - strand, within CA264_07295 at 1686.277 kb on - strand, within CA264_07295 at 1686.358 kb on + strand at 1686.390 kb on + strand at 1686.391 kb on - strand at 1686.395 kb on + strand at 1686.396 kb on - strand at 1686.401 kb on - strand at 1686.474 kb on + strand at 1686.497 kb on - strand at 1686.500 kb on + strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.508 kb on - strand at 1686.511 kb on + strand at 1686.511 kb on + strand at 1686.511 kb on + strand at 1686.512 kb on - strand at 1686.512 kb on - strand at 1686.512 kb on - strand at 1686.573 kb on - strand at 1686.590 kb on - strand at 1686.592 kb on + strand at 1686.593 kb on - strand at 1686.604 kb on + strand at 1686.655 kb on - strand at 1686.659 kb on + strand at 1686.725 kb on - strand at 1686.795 kb on + strand at 1686.825 kb on + strand at 1686.842 kb on + strand at 1686.851 kb on + strand at 1686.941 kb on + strand, within CA264_07300 at 1686.941 kb on + strand, within CA264_07300 at 1686.943 kb on + strand, within CA264_07300 at 1686.943 kb on + strand, within CA264_07300 at 1686.943 kb on + strand, within CA264_07300 at 1686.947 kb on + strand, within CA264_07300 at 1686.948 kb on - strand, within CA264_07300 at 1686.978 kb on + strand, within CA264_07300 at 1686.979 kb on - strand, within CA264_07300 at 1686.979 kb on - strand, within CA264_07300 at 1686.998 kb on - strand, within CA264_07300 at 1687.003 kb on + strand, within CA264_07300 at 1687.007 kb on - strand, within CA264_07300 at 1687.007 kb on - strand, within CA264_07300 at 1687.007 kb on - strand, within CA264_07300 at 1687.070 kb on + strand, within CA264_07300 at 1687.071 kb on - strand, within CA264_07300 at 1687.071 kb on - strand, within CA264_07300 at 1687.142 kb on - strand, within CA264_07300 at 1687.146 kb on + strand, within CA264_07300 at 1687.146 kb on + strand, within CA264_07300 at 1687.148 kb on + strand, within CA264_07300 at 1687.184 kb on - strand, within CA264_07300 at 1687.219 kb on + strand, within CA264_07300 at 1687.301 kb on + strand, within CA264_07300 at 1687.302 kb on - strand, within CA264_07300
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,684,727 - CA264_07290 0.73 -1.3 1,684,842 + CA264_07290 0.84 -1.2 1,684,842 + CA264_07290 0.84 -1.2 1,684,843 - CA264_07290 0.84 +0.7 1,684,850 - CA264_07290 0.85 -0.3 1,684,850 - CA264_07290 0.85 +0.6 1,684,869 + CA264_07290 0.87 +0.9 1,684,870 - CA264_07290 0.87 +0.5 1,684,870 - CA264_07290 0.87 +0.9 1,684,870 - CA264_07290 0.87 +1.9 1,684,872 - CA264_07290 0.87 -0.4 1,684,893 - CA264_07290 0.89 -1.4 1,685,021 - +1.7 1,685,035 - -0.3 1,685,039 + -0.4 1,685,039 + +0.6 1,685,039 + +1.1 1,685,090 + -1.6 1,685,091 - -0.8 1,685,144 + -0.7 1,685,145 - -2.0 1,685,175 + -0.5 1,685,219 + -0.7 1,685,219 + -0.8 1,685,219 + -0.8 1,685,224 - +0.5 1,685,224 - +1.4 1,685,279 - +1.1 1,685,280 + +0.0 1,685,298 + +0.2 1,685,306 + -0.3 1,685,307 - -0.4 1,685,307 - -0.5 1,685,309 - -0.6 1,685,324 - -2.4 1,685,338 + +0.9 1,685,350 + -0.4 1,685,397 - -0.4 1,685,412 + -0.0 1,685,412 + +0.5 1,685,413 - -1.0 1,685,413 - -2.8 1,685,520 - -1.9 1,685,520 - +0.2 1,685,521 + +2.1 1,685,521 + +0.9 1,685,522 - +0.3 1,685,608 + -0.4 1,685,618 + -0.4 1,685,618 + +0.0 1,685,619 - +0.2 1,685,619 - +0.3 1,685,688 + -0.3 1,685,704 + +0.5 1,685,861 - CA264_07295 0.22 +0.1 1,685,959 + CA264_07295 0.36 +0.2 1,686,104 + CA264_07295 0.57 -0.5 1,686,105 - CA264_07295 0.57 -1.0 1,686,184 + CA264_07295 0.69 +0.2 1,686,184 + CA264_07295 0.69 -0.4 1,686,185 - CA264_07295 0.69 -1.0 1,686,277 - CA264_07295 0.82 -0.3 1,686,277 - CA264_07295 0.82 -2.2 1,686,358 + +0.7 1,686,390 + +0.1 1,686,391 - -0.3 1,686,395 + -0.8 1,686,396 - +0.3 1,686,401 - +0.6 1,686,474 + -1.8 1,686,497 - -1.1 1,686,500 + -0.3 1,686,501 - +0.1 1,686,501 - +0.5 1,686,501 - -0.9 1,686,501 - +0.1 1,686,501 - -0.3 1,686,508 - -0.7 1,686,511 + -0.9 1,686,511 + -1.7 1,686,511 + -1.9 1,686,512 - -1.8 1,686,512 - -0.7 1,686,512 - -0.1 1,686,573 - -0.9 1,686,590 - -0.9 1,686,592 + -1.0 1,686,593 - +0.4 1,686,604 + +0.0 1,686,655 - +1.9 1,686,659 + +1.7 1,686,725 - -0.4 1,686,795 + -1.6 1,686,825 + -0.6 1,686,842 + +0.9 1,686,851 + -0.5 1,686,941 + CA264_07300 0.18 +0.9 1,686,941 + CA264_07300 0.18 -0.2 1,686,943 + CA264_07300 0.18 -0.0 1,686,943 + CA264_07300 0.18 -2.7 1,686,943 + CA264_07300 0.18 +0.5 1,686,947 + CA264_07300 0.18 +0.4 1,686,948 - CA264_07300 0.18 +0.8 1,686,978 + CA264_07300 0.21 -1.4 1,686,979 - CA264_07300 0.21 -1.6 1,686,979 - CA264_07300 0.21 -0.6 1,686,998 - CA264_07300 0.23 +0.4 1,687,003 + CA264_07300 0.23 -1.7 1,687,007 - CA264_07300 0.23 +1.5 1,687,007 - CA264_07300 0.23 +0.4 1,687,007 - CA264_07300 0.23 -0.1 1,687,070 + CA264_07300 0.29 +0.5 1,687,071 - CA264_07300 0.29 -0.3 1,687,071 - CA264_07300 0.29 -2.0 1,687,142 - CA264_07300 0.36 -1.0 1,687,146 + CA264_07300 0.36 -0.6 1,687,146 + CA264_07300 0.36 -0.0 1,687,148 + CA264_07300 0.36 -0.8 1,687,184 - CA264_07300 0.39 +0.2 1,687,219 + CA264_07300 0.42 -0.3 1,687,301 + CA264_07300 0.50 -0.5 1,687,302 - CA264_07300 0.50 +0.4
Or see this region's nucleotide sequence