Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07130 and CA264_07135 are separated by 9 nucleotides CA264_07135 and CA264_07140 are separated by 242 nucleotides
CA264_07130: CA264_07130 - hypothetical protein, at 1,643,264 to 1,645,189
_07130
CA264_07135: CA264_07135 - 7-carboxy-7-deazaguanine synthase QueE, at 1,645,199 to 1,645,852
_07135
CA264_07140: CA264_07140 - hydroxyacid dehydrogenase, at 1,646,095 to 1,647,138
_07140
Position (kb)
1645
1646 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1644.240 kb on + strand, within CA264_07130 at 1644.240 kb on + strand, within CA264_07130 at 1644.262 kb on + strand, within CA264_07130 at 1644.262 kb on + strand, within CA264_07130 at 1644.284 kb on - strand, within CA264_07130 at 1644.284 kb on - strand, within CA264_07130 at 1644.289 kb on + strand, within CA264_07130 at 1644.289 kb on + strand, within CA264_07130 at 1644.294 kb on + strand, within CA264_07130 at 1644.295 kb on - strand, within CA264_07130 at 1644.358 kb on + strand, within CA264_07130 at 1644.359 kb on - strand, within CA264_07130 at 1644.408 kb on + strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.515 kb on - strand, within CA264_07130 at 1644.570 kb on + strand, within CA264_07130 at 1644.616 kb on - strand, within CA264_07130 at 1644.616 kb on - strand, within CA264_07130 at 1644.619 kb on + strand, within CA264_07130 at 1644.619 kb on + strand, within CA264_07130 at 1644.620 kb on - strand, within CA264_07130 at 1644.643 kb on + strand, within CA264_07130 at 1644.643 kb on + strand, within CA264_07130 at 1644.644 kb on - strand, within CA264_07130 at 1644.749 kb on - strand, within CA264_07130 at 1644.813 kb on + strand, within CA264_07130 at 1644.834 kb on + strand, within CA264_07130 at 1644.946 kb on + strand, within CA264_07130 at 1644.947 kb on - strand, within CA264_07130 at 1644.985 kb on - strand, within CA264_07130 at 1645.066 kb on - strand at 1645.066 kb on - strand at 1645.109 kb on - strand at 1645.136 kb on - strand at 1645.147 kb on + strand at 1645.172 kb on - strand at 1645.183 kb on + strand at 1645.184 kb on - strand at 1645.184 kb on - strand at 1645.185 kb on + strand at 1645.185 kb on + strand at 1645.185 kb on + strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.215 kb on + strand at 1645.215 kb on + strand at 1645.216 kb on - strand at 1645.253 kb on - strand at 1645.264 kb on - strand at 1645.318 kb on - strand, within CA264_07135 at 1645.397 kb on + strand, within CA264_07135 at 1645.397 kb on + strand, within CA264_07135 at 1645.398 kb on - strand, within CA264_07135 at 1645.419 kb on - strand, within CA264_07135 at 1645.419 kb on - strand, within CA264_07135 at 1645.489 kb on - strand, within CA264_07135 at 1645.560 kb on + strand, within CA264_07135 at 1645.889 kb on + strand at 1645.904 kb on - strand at 1645.904 kb on - strand at 1645.904 kb on - strand at 1645.958 kb on + strand at 1646.022 kb on + strand at 1646.040 kb on - strand at 1646.056 kb on - strand at 1646.096 kb on + strand at 1646.096 kb on + strand at 1646.262 kb on + strand, within CA264_07140 at 1646.262 kb on + strand, within CA264_07140 at 1646.263 kb on - strand, within CA264_07140 at 1646.263 kb on - strand, within CA264_07140 at 1646.269 kb on + strand, within CA264_07140 at 1646.269 kb on + strand, within CA264_07140 at 1646.299 kb on - strand, within CA264_07140 at 1646.376 kb on - strand, within CA264_07140 at 1646.376 kb on - strand, within CA264_07140 at 1646.406 kb on + strand, within CA264_07140 at 1646.407 kb on - strand, within CA264_07140 at 1646.476 kb on - strand, within CA264_07140 at 1646.476 kb on - strand, within CA264_07140 at 1646.645 kb on + strand, within CA264_07140 at 1646.645 kb on + strand, within CA264_07140 at 1646.646 kb on - strand, within CA264_07140 at 1646.646 kb on - strand, within CA264_07140 at 1646.705 kb on - strand, within CA264_07140 at 1646.734 kb on + strand, within CA264_07140 at 1646.735 kb on - strand, within CA264_07140 at 1646.784 kb on - strand, within CA264_07140 at 1646.792 kb on + strand, within CA264_07140
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,644,240 + CA264_07130 0.51 -0.5 1,644,240 + CA264_07130 0.51 +0.7 1,644,262 + CA264_07130 0.52 -1.3 1,644,262 + CA264_07130 0.52 +0.9 1,644,284 - CA264_07130 0.53 -0.0 1,644,284 - CA264_07130 0.53 +0.4 1,644,289 + CA264_07130 0.53 +0.7 1,644,289 + CA264_07130 0.53 -0.9 1,644,294 + CA264_07130 0.53 -1.7 1,644,295 - CA264_07130 0.54 +1.5 1,644,358 + CA264_07130 0.57 -0.6 1,644,359 - CA264_07130 0.57 +0.2 1,644,408 + CA264_07130 0.59 +1.3 1,644,409 - CA264_07130 0.59 -1.4 1,644,409 - CA264_07130 0.59 -1.2 1,644,409 - CA264_07130 0.59 +0.7 1,644,515 - CA264_07130 0.65 +0.0 1,644,570 + CA264_07130 0.68 +0.1 1,644,616 - CA264_07130 0.70 -1.6 1,644,616 - CA264_07130 0.70 -0.0 1,644,619 + CA264_07130 0.70 -1.1 1,644,619 + CA264_07130 0.70 -0.4 1,644,620 - CA264_07130 0.70 -0.7 1,644,643 + CA264_07130 0.72 -0.2 1,644,643 + CA264_07130 0.72 -0.2 1,644,644 - CA264_07130 0.72 +0.2 1,644,749 - CA264_07130 0.77 -2.6 1,644,813 + CA264_07130 0.80 +0.6 1,644,834 + CA264_07130 0.82 -1.2 1,644,946 + CA264_07130 0.87 +1.1 1,644,947 - CA264_07130 0.87 +0.5 1,644,985 - CA264_07130 0.89 +0.3 1,645,066 - +0.5 1,645,066 - +0.4 1,645,109 - +0.2 1,645,136 - -0.5 1,645,147 + +0.6 1,645,172 - -2.2 1,645,183 + +3.1 1,645,184 - -0.7 1,645,184 - +0.1 1,645,185 + +0.5 1,645,185 + -0.3 1,645,185 + -1.9 1,645,186 - -1.1 1,645,186 - -0.1 1,645,186 - +0.2 1,645,186 - +1.6 1,645,186 - +0.9 1,645,186 - +2.1 1,645,215 + -1.1 1,645,215 + +0.4 1,645,216 - +0.2 1,645,253 - -0.2 1,645,264 - +0.1 1,645,318 - CA264_07135 0.18 -1.1 1,645,397 + CA264_07135 0.30 -1.1 1,645,397 + CA264_07135 0.30 +0.1 1,645,398 - CA264_07135 0.30 -1.4 1,645,419 - CA264_07135 0.34 -1.6 1,645,419 - CA264_07135 0.34 +0.2 1,645,489 - CA264_07135 0.44 +0.2 1,645,560 + CA264_07135 0.55 -0.5 1,645,889 + +0.4 1,645,904 - +0.1 1,645,904 - +1.2 1,645,904 - +1.4 1,645,958 + +0.5 1,646,022 + +2.2 1,646,040 - +1.3 1,646,056 - +2.4 1,646,096 + -0.3 1,646,096 + -0.1 1,646,262 + CA264_07140 0.16 -0.7 1,646,262 + CA264_07140 0.16 -0.8 1,646,263 - CA264_07140 0.16 +0.1 1,646,263 - CA264_07140 0.16 -0.5 1,646,269 + CA264_07140 0.17 -0.5 1,646,269 + CA264_07140 0.17 -1.2 1,646,299 - CA264_07140 0.20 -0.6 1,646,376 - CA264_07140 0.27 -0.4 1,646,376 - CA264_07140 0.27 -1.6 1,646,406 + CA264_07140 0.30 +0.6 1,646,407 - CA264_07140 0.30 -1.7 1,646,476 - CA264_07140 0.36 +1.4 1,646,476 - CA264_07140 0.36 -0.9 1,646,645 + CA264_07140 0.53 -0.5 1,646,645 + CA264_07140 0.53 -0.8 1,646,646 - CA264_07140 0.53 +0.6 1,646,646 - CA264_07140 0.53 -0.9 1,646,705 - CA264_07140 0.58 -0.4 1,646,734 + CA264_07140 0.61 -0.9 1,646,735 - CA264_07140 0.61 -0.4 1,646,784 - CA264_07140 0.66 +0.1 1,646,792 + CA264_07140 0.67 +0.2
Or see this region's nucleotide sequence