Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06840 and CA264_06845 overlap by 17 nucleotides CA264_06845 and CA264_06850 are separated by 17 nucleotides CA264_06850 and CA264_06855 are separated by 72 nucleotides
CA264_06840: CA264_06840 - nitrous oxide reductase, at 1,581,871 to 1,583,224
_06840
CA264_06845: CA264_06845 - hypothetical protein, at 1,583,208 to 1,583,666
_06845
CA264_06850: CA264_06850 - hypothetical protein, at 1,583,684 to 1,584,280
_06850
CA264_06855: CA264_06855 - nitrous oxide reductase, at 1,584,353 to 1,586,380
_06855
Position (kb)
1583
1584 Strain fitness (log2 ratio)
-2
-1
0
1 at 1582.399 kb on + strand, within CA264_06840 at 1582.512 kb on + strand, within CA264_06840 at 1582.512 kb on + strand, within CA264_06840 at 1582.549 kb on + strand, within CA264_06840 at 1582.549 kb on + strand, within CA264_06840 at 1582.550 kb on - strand, within CA264_06840 at 1582.550 kb on - strand, within CA264_06840 at 1582.550 kb on - strand, within CA264_06840 at 1582.554 kb on + strand, within CA264_06840 at 1582.554 kb on + strand, within CA264_06840 at 1582.555 kb on - strand, within CA264_06840 at 1582.555 kb on - strand, within CA264_06840 at 1582.560 kb on + strand, within CA264_06840 at 1582.582 kb on + strand, within CA264_06840 at 1582.582 kb on + strand, within CA264_06840 at 1582.582 kb on + strand, within CA264_06840 at 1582.583 kb on - strand, within CA264_06840 at 1582.659 kb on - strand, within CA264_06840 at 1582.695 kb on - strand, within CA264_06840 at 1582.706 kb on - strand, within CA264_06840 at 1582.706 kb on - strand, within CA264_06840 at 1582.713 kb on + strand, within CA264_06840 at 1582.767 kb on - strand, within CA264_06840 at 1582.769 kb on + strand, within CA264_06840 at 1582.853 kb on + strand, within CA264_06840 at 1582.877 kb on + strand, within CA264_06840 at 1582.877 kb on + strand, within CA264_06840 at 1582.878 kb on - strand, within CA264_06840 at 1582.899 kb on + strand, within CA264_06840 at 1582.899 kb on + strand, within CA264_06840 at 1582.941 kb on - strand, within CA264_06840 at 1582.944 kb on + strand, within CA264_06840 at 1582.964 kb on + strand, within CA264_06840 at 1582.964 kb on + strand, within CA264_06840 at 1582.999 kb on + strand, within CA264_06840 at 1583.012 kb on + strand, within CA264_06840 at 1583.021 kb on - strand, within CA264_06840 at 1583.035 kb on - strand, within CA264_06840 at 1583.067 kb on - strand, within CA264_06840 at 1583.120 kb on - strand at 1583.139 kb on - strand at 1583.172 kb on - strand at 1583.189 kb on + strand at 1583.190 kb on - strand at 1583.190 kb on - strand at 1583.192 kb on - strand at 1583.396 kb on + strand, within CA264_06845 at 1583.397 kb on - strand, within CA264_06845 at 1583.405 kb on + strand, within CA264_06845 at 1583.590 kb on - strand, within CA264_06845 at 1583.590 kb on - strand, within CA264_06845 at 1583.637 kb on + strand at 1583.638 kb on - strand at 1583.640 kb on - strand at 1583.657 kb on - strand at 1583.750 kb on + strand, within CA264_06850 at 1583.750 kb on + strand, within CA264_06850 at 1583.751 kb on - strand, within CA264_06850 at 1583.752 kb on + strand, within CA264_06850 at 1583.753 kb on - strand, within CA264_06850 at 1583.766 kb on - strand, within CA264_06850 at 1583.767 kb on + strand, within CA264_06850 at 1583.767 kb on + strand, within CA264_06850 at 1583.767 kb on + strand, within CA264_06850 at 1583.768 kb on - strand, within CA264_06850 at 1583.771 kb on + strand, within CA264_06850 at 1583.772 kb on - strand, within CA264_06850 at 1583.773 kb on + strand, within CA264_06850 at 1583.773 kb on + strand, within CA264_06850 at 1583.774 kb on - strand, within CA264_06850 at 1583.844 kb on + strand, within CA264_06850 at 1583.863 kb on + strand, within CA264_06850 at 1583.863 kb on + strand, within CA264_06850 at 1583.913 kb on + strand, within CA264_06850 at 1583.913 kb on + strand, within CA264_06850 at 1583.913 kb on + strand, within CA264_06850 at 1583.914 kb on - strand, within CA264_06850 at 1583.921 kb on + strand, within CA264_06850 at 1583.986 kb on + strand, within CA264_06850 at 1584.015 kb on - strand, within CA264_06850 at 1584.042 kb on + strand, within CA264_06850 at 1584.043 kb on - strand, within CA264_06850 at 1584.056 kb on - strand, within CA264_06850 at 1584.090 kb on + strand, within CA264_06850 at 1584.121 kb on + strand, within CA264_06850 at 1584.124 kb on - strand, within CA264_06850 at 1584.287 kb on - strand at 1584.299 kb on + strand at 1584.300 kb on - strand at 1584.416 kb on + strand at 1584.416 kb on + strand at 1584.416 kb on + strand at 1584.424 kb on + strand at 1584.424 kb on + strand at 1584.426 kb on + strand at 1584.427 kb on - strand at 1584.427 kb on - strand at 1584.427 kb on - strand at 1584.472 kb on - strand at 1584.472 kb on - strand at 1584.618 kb on + strand, within CA264_06855 at 1584.620 kb on + strand, within CA264_06855 at 1584.620 kb on + strand, within CA264_06855 at 1584.638 kb on + strand, within CA264_06855 at 1584.640 kb on + strand, within CA264_06855 at 1584.640 kb on + strand, within CA264_06855
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,582,399 + CA264_06840 0.39 -0.3 1,582,512 + CA264_06840 0.47 +0.3 1,582,512 + CA264_06840 0.47 -0.4 1,582,549 + CA264_06840 0.50 +1.1 1,582,549 + CA264_06840 0.50 -0.0 1,582,550 - CA264_06840 0.50 -1.5 1,582,550 - CA264_06840 0.50 +0.8 1,582,550 - CA264_06840 0.50 -0.0 1,582,554 + CA264_06840 0.50 +0.9 1,582,554 + CA264_06840 0.50 -1.4 1,582,555 - CA264_06840 0.51 +0.4 1,582,555 - CA264_06840 0.51 -0.7 1,582,560 + CA264_06840 0.51 +0.4 1,582,582 + CA264_06840 0.53 -0.5 1,582,582 + CA264_06840 0.53 +0.3 1,582,582 + CA264_06840 0.53 +1.7 1,582,583 - CA264_06840 0.53 -0.9 1,582,659 - CA264_06840 0.58 -1.0 1,582,695 - CA264_06840 0.61 +0.0 1,582,706 - CA264_06840 0.62 +0.1 1,582,706 - CA264_06840 0.62 -1.1 1,582,713 + CA264_06840 0.62 -0.2 1,582,767 - CA264_06840 0.66 +0.2 1,582,769 + CA264_06840 0.66 +0.7 1,582,853 + CA264_06840 0.73 -0.9 1,582,877 + CA264_06840 0.74 -0.9 1,582,877 + CA264_06840 0.74 -0.0 1,582,878 - CA264_06840 0.74 -2.5 1,582,899 + CA264_06840 0.76 +0.8 1,582,899 + CA264_06840 0.76 -0.3 1,582,941 - CA264_06840 0.79 -0.1 1,582,944 + CA264_06840 0.79 +0.4 1,582,964 + CA264_06840 0.81 -0.3 1,582,964 + CA264_06840 0.81 +0.9 1,582,999 + CA264_06840 0.83 -1.3 1,583,012 + CA264_06840 0.84 +0.1 1,583,021 - CA264_06840 0.85 -2.1 1,583,035 - CA264_06840 0.86 +1.4 1,583,067 - CA264_06840 0.88 -1.3 1,583,120 - -0.9 1,583,139 - +0.9 1,583,172 - -1.5 1,583,189 + -1.4 1,583,190 - -0.1 1,583,190 - +0.7 1,583,192 - -0.0 1,583,396 + CA264_06845 0.41 +0.8 1,583,397 - CA264_06845 0.41 +1.4 1,583,405 + CA264_06845 0.43 +0.6 1,583,590 - CA264_06845 0.83 +0.2 1,583,590 - CA264_06845 0.83 +1.4 1,583,637 + -0.7 1,583,638 - +1.0 1,583,640 - -0.0 1,583,657 - -0.0 1,583,750 + CA264_06850 0.11 +0.7 1,583,750 + CA264_06850 0.11 -0.5 1,583,751 - CA264_06850 0.11 -1.1 1,583,752 + CA264_06850 0.11 -1.0 1,583,753 - CA264_06850 0.12 -0.0 1,583,766 - CA264_06850 0.14 -0.6 1,583,767 + CA264_06850 0.14 +0.4 1,583,767 + CA264_06850 0.14 -0.9 1,583,767 + CA264_06850 0.14 -0.1 1,583,768 - CA264_06850 0.14 -0.4 1,583,771 + CA264_06850 0.15 -1.0 1,583,772 - CA264_06850 0.15 +0.4 1,583,773 + CA264_06850 0.15 -1.0 1,583,773 + CA264_06850 0.15 -0.6 1,583,774 - CA264_06850 0.15 -0.2 1,583,844 + CA264_06850 0.27 -1.1 1,583,863 + CA264_06850 0.30 -0.5 1,583,863 + CA264_06850 0.30 -1.2 1,583,913 + CA264_06850 0.38 -1.1 1,583,913 + CA264_06850 0.38 -0.5 1,583,913 + CA264_06850 0.38 -1.6 1,583,914 - CA264_06850 0.39 -0.5 1,583,921 + CA264_06850 0.40 +0.7 1,583,986 + CA264_06850 0.51 +1.1 1,584,015 - CA264_06850 0.55 -1.7 1,584,042 + CA264_06850 0.60 -0.4 1,584,043 - CA264_06850 0.60 +0.1 1,584,056 - CA264_06850 0.62 -0.7 1,584,090 + CA264_06850 0.68 -1.2 1,584,121 + CA264_06850 0.73 -0.0 1,584,124 - CA264_06850 0.74 +0.1 1,584,287 - -0.0 1,584,299 + -0.4 1,584,300 - +0.9 1,584,416 + -0.7 1,584,416 + -0.6 1,584,416 + -1.4 1,584,424 + -0.4 1,584,424 + +1.1 1,584,426 + -0.7 1,584,427 - +1.0 1,584,427 - -0.2 1,584,427 - -0.8 1,584,472 - -0.3 1,584,472 - +0.4 1,584,618 + CA264_06855 0.13 -0.4 1,584,620 + CA264_06855 0.13 +1.6 1,584,620 + CA264_06855 0.13 +1.1 1,584,638 + CA264_06855 0.14 -1.7 1,584,640 + CA264_06855 0.14 -0.5 1,584,640 + CA264_06855 0.14 -0.5
Or see this region's nucleotide sequence