Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06435 and CA264_06440 are separated by 48 nucleotides CA264_06440 and CA264_06445 are separated by 37 nucleotides CA264_06445 and CA264_06450 are separated by 90 nucleotides
CA264_06435: CA264_06435 - ATP-dependent endonuclease, at 1,491,314 to 1,492,720
_06435
CA264_06440: CA264_06440 - thioesterase, at 1,492,769 to 1,493,239
_06440
CA264_06445: CA264_06445 - NUDIX hydrolase, at 1,493,277 to 1,493,762
_06445
CA264_06450: CA264_06450 - hypothetical protein, at 1,493,853 to 1,494,740
_06450
Position (kb)
1493
1494 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1492.278 kb on + strand, within CA264_06435 at 1492.279 kb on - strand, within CA264_06435 at 1492.279 kb on - strand, within CA264_06435 at 1492.349 kb on + strand, within CA264_06435 at 1492.350 kb on - strand, within CA264_06435 at 1492.354 kb on + strand, within CA264_06435 at 1492.356 kb on + strand, within CA264_06435 at 1492.356 kb on + strand, within CA264_06435 at 1492.357 kb on - strand, within CA264_06435 at 1492.364 kb on - strand, within CA264_06435 at 1492.442 kb on - strand, within CA264_06435 at 1492.442 kb on - strand, within CA264_06435 at 1492.470 kb on + strand, within CA264_06435 at 1492.481 kb on + strand, within CA264_06435 at 1492.481 kb on + strand, within CA264_06435 at 1492.518 kb on + strand, within CA264_06435 at 1492.519 kb on - strand, within CA264_06435 at 1492.522 kb on + strand, within CA264_06435 at 1492.522 kb on + strand, within CA264_06435 at 1492.523 kb on - strand, within CA264_06435 at 1492.523 kb on - strand, within CA264_06435 at 1492.587 kb on + strand at 1492.632 kb on - strand at 1492.633 kb on + strand at 1492.726 kb on + strand at 1492.730 kb on + strand at 1492.743 kb on + strand at 1492.775 kb on + strand at 1492.878 kb on + strand, within CA264_06440 at 1492.878 kb on + strand, within CA264_06440 at 1492.878 kb on + strand, within CA264_06440 at 1492.879 kb on - strand, within CA264_06440 at 1492.879 kb on - strand, within CA264_06440 at 1492.926 kb on + strand, within CA264_06440 at 1492.968 kb on + strand, within CA264_06440 at 1493.042 kb on + strand, within CA264_06440 at 1493.126 kb on + strand, within CA264_06440 at 1493.126 kb on + strand, within CA264_06440 at 1493.127 kb on - strand, within CA264_06440 at 1493.141 kb on + strand, within CA264_06440 at 1493.142 kb on - strand, within CA264_06440 at 1493.201 kb on + strand at 1493.201 kb on + strand at 1493.202 kb on - strand at 1493.202 kb on - strand at 1493.226 kb on + strand at 1493.227 kb on - strand at 1493.227 kb on - strand at 1493.362 kb on + strand, within CA264_06445 at 1493.444 kb on + strand, within CA264_06445 at 1493.569 kb on + strand, within CA264_06445 at 1493.668 kb on + strand, within CA264_06445 at 1493.668 kb on + strand, within CA264_06445 at 1493.749 kb on - strand at 1493.761 kb on - strand at 1493.761 kb on - strand at 1493.894 kb on - strand at 1493.894 kb on - strand at 1493.894 kb on - strand at 1493.940 kb on + strand at 1493.941 kb on - strand at 1494.193 kb on - strand, within CA264_06450 at 1494.243 kb on + strand, within CA264_06450 at 1494.297 kb on + strand, within CA264_06450 at 1494.412 kb on - strand, within CA264_06450 at 1494.432 kb on + strand, within CA264_06450 at 1494.432 kb on + strand, within CA264_06450 at 1494.433 kb on - strand, within CA264_06450 at 1494.436 kb on + strand, within CA264_06450 at 1494.437 kb on - strand, within CA264_06450 at 1494.480 kb on - strand, within CA264_06450 at 1494.517 kb on - strand, within CA264_06450 at 1494.614 kb on - strand, within CA264_06450 at 1494.624 kb on + strand, within CA264_06450 at 1494.625 kb on - strand, within CA264_06450 at 1494.638 kb on - strand, within CA264_06450 at 1494.638 kb on - strand, within CA264_06450 at 1494.669 kb on + strand at 1494.670 kb on - strand at 1494.676 kb on - strand at 1494.676 kb on - strand at 1494.677 kb on + strand at 1494.717 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,492,278 + CA264_06435 0.69 -0.7 1,492,279 - CA264_06435 0.69 +1.3 1,492,279 - CA264_06435 0.69 +2.0 1,492,349 + CA264_06435 0.74 -0.4 1,492,350 - CA264_06435 0.74 -2.4 1,492,354 + CA264_06435 0.74 -0.6 1,492,356 + CA264_06435 0.74 -1.0 1,492,356 + CA264_06435 0.74 -1.6 1,492,357 - CA264_06435 0.74 -0.0 1,492,364 - CA264_06435 0.75 +0.8 1,492,442 - CA264_06435 0.80 -1.1 1,492,442 - CA264_06435 0.80 -1.1 1,492,470 + CA264_06435 0.82 -1.0 1,492,481 + CA264_06435 0.83 +0.4 1,492,481 + CA264_06435 0.83 +0.1 1,492,518 + CA264_06435 0.86 +1.4 1,492,519 - CA264_06435 0.86 -1.1 1,492,522 + CA264_06435 0.86 +0.6 1,492,522 + CA264_06435 0.86 -0.9 1,492,523 - CA264_06435 0.86 -1.0 1,492,523 - CA264_06435 0.86 +0.3 1,492,587 + -1.9 1,492,632 - -0.3 1,492,633 + +0.3 1,492,726 + +0.2 1,492,730 + +0.2 1,492,743 + -0.5 1,492,775 + -1.4 1,492,878 + CA264_06440 0.23 +2.1 1,492,878 + CA264_06440 0.23 -1.2 1,492,878 + CA264_06440 0.23 -0.3 1,492,879 - CA264_06440 0.23 -0.2 1,492,879 - CA264_06440 0.23 -1.4 1,492,926 + CA264_06440 0.33 -0.8 1,492,968 + CA264_06440 0.42 -1.0 1,493,042 + CA264_06440 0.58 -0.2 1,493,126 + CA264_06440 0.76 +0.7 1,493,126 + CA264_06440 0.76 -0.6 1,493,127 - CA264_06440 0.76 -0.4 1,493,141 + CA264_06440 0.79 +0.8 1,493,142 - CA264_06440 0.79 -1.3 1,493,201 + +0.2 1,493,201 + -0.0 1,493,202 - -1.3 1,493,202 - +0.3 1,493,226 + +0.6 1,493,227 - -0.8 1,493,227 - -0.4 1,493,362 + CA264_06445 0.17 +0.0 1,493,444 + CA264_06445 0.34 +2.2 1,493,569 + CA264_06445 0.60 +2.3 1,493,668 + CA264_06445 0.80 -0.3 1,493,668 + CA264_06445 0.80 -0.6 1,493,749 - -0.3 1,493,761 - -0.6 1,493,761 - +0.0 1,493,894 - -0.8 1,493,894 - -0.9 1,493,894 - -0.0 1,493,940 + -0.6 1,493,941 - +0.3 1,494,193 - CA264_06450 0.38 +0.3 1,494,243 + CA264_06450 0.44 -1.1 1,494,297 + CA264_06450 0.50 +2.7 1,494,412 - CA264_06450 0.63 +1.3 1,494,432 + CA264_06450 0.65 -0.5 1,494,432 + CA264_06450 0.65 +0.2 1,494,433 - CA264_06450 0.65 +0.9 1,494,436 + CA264_06450 0.66 -0.2 1,494,437 - CA264_06450 0.66 +0.8 1,494,480 - CA264_06450 0.71 -0.8 1,494,517 - CA264_06450 0.75 +0.1 1,494,614 - CA264_06450 0.86 +1.0 1,494,624 + CA264_06450 0.87 -0.1 1,494,625 - CA264_06450 0.87 -0.8 1,494,638 - CA264_06450 0.88 +1.5 1,494,638 - CA264_06450 0.88 -0.8 1,494,669 + -1.0 1,494,670 - -0.3 1,494,676 - -0.8 1,494,676 - +0.9 1,494,677 + +1.0 1,494,717 + -0.1
Or see this region's nucleotide sequence