Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06325 and CA264_06330 overlap by 4 nucleotides CA264_06330 and CA264_06335 are separated by 5 nucleotides CA264_06335 and CA264_06340 overlap by 35 nucleotides CA264_06340 and CA264_06345 are separated by 210 nucleotides
CA264_06325: CA264_06325 - cation:proton antiporter, at 1,471,443 to 1,471,940
_06325
CA264_06330: CA264_06330 - cation:proton antiporter, at 1,471,937 to 1,472,206
_06330
CA264_06335: CA264_06335 - Na+/H+ antiporter subunit G, at 1,472,212 to 1,472,655
_06335
CA264_06340: CA264_06340 - protein phosphatase, at 1,472,621 to 1,473,442
_06340
CA264_06345: CA264_06345 - hypothetical protein, at 1,473,653 to 1,475,434
_06345
Position (kb)
1472
1473
1474 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1471.710 kb on + strand, within CA264_06325 at 1471.711 kb on - strand, within CA264_06325 at 1471.711 kb on - strand, within CA264_06325 at 1471.766 kb on - strand, within CA264_06325 at 1471.784 kb on + strand, within CA264_06325 at 1471.784 kb on + strand, within CA264_06325 at 1471.811 kb on + strand, within CA264_06325 at 1471.812 kb on - strand, within CA264_06325 at 1471.814 kb on - strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.843 kb on - strand, within CA264_06325 at 1471.856 kb on - strand, within CA264_06325 at 1471.856 kb on - strand, within CA264_06325 at 1471.970 kb on - strand, within CA264_06330 at 1471.980 kb on + strand, within CA264_06330 at 1472.086 kb on - strand, within CA264_06330 at 1472.181 kb on - strand at 1472.183 kb on + strand at 1472.188 kb on + strand at 1472.189 kb on - strand at 1472.189 kb on - strand at 1472.189 kb on - strand at 1472.197 kb on + strand at 1472.224 kb on - strand at 1472.224 kb on - strand at 1472.226 kb on - strand at 1472.330 kb on - strand, within CA264_06335 at 1472.582 kb on + strand, within CA264_06335 at 1472.600 kb on - strand, within CA264_06335 at 1472.629 kb on + strand at 1472.630 kb on - strand at 1472.677 kb on - strand at 1472.719 kb on - strand, within CA264_06340 at 1472.799 kb on - strand, within CA264_06340 at 1472.799 kb on - strand, within CA264_06340 at 1472.807 kb on - strand, within CA264_06340 at 1472.807 kb on - strand, within CA264_06340 at 1472.807 kb on - strand, within CA264_06340 at 1472.815 kb on - strand, within CA264_06340 at 1472.838 kb on + strand, within CA264_06340 at 1473.105 kb on - strand, within CA264_06340 at 1473.137 kb on - strand, within CA264_06340 at 1473.282 kb on + strand, within CA264_06340 at 1473.295 kb on + strand, within CA264_06340 at 1473.307 kb on + strand, within CA264_06340 at 1473.375 kb on - strand at 1473.466 kb on - strand at 1473.472 kb on + strand at 1473.473 kb on - strand at 1473.473 kb on - strand at 1473.501 kb on + strand at 1473.503 kb on + strand at 1473.503 kb on + strand at 1473.504 kb on - strand at 1473.511 kb on - strand at 1473.524 kb on - strand at 1473.524 kb on - strand at 1473.524 kb on - strand at 1473.622 kb on + strand at 1473.623 kb on - strand at 1473.643 kb on + strand at 1473.663 kb on - strand at 1473.674 kb on - strand at 1473.789 kb on + strand at 1473.789 kb on + strand at 1473.789 kb on + strand at 1473.789 kb on + strand at 1473.790 kb on - strand at 1473.794 kb on + strand at 1473.990 kb on - strand, within CA264_06345 at 1473.990 kb on - strand, within CA264_06345 at 1474.089 kb on - strand, within CA264_06345 at 1474.312 kb on + strand, within CA264_06345 at 1474.313 kb on - strand, within CA264_06345 at 1474.358 kb on + strand, within CA264_06345 at 1474.358 kb on + strand, within CA264_06345 at 1474.358 kb on + strand, within CA264_06345 at 1474.359 kb on - strand, within CA264_06345 at 1474.359 kb on - strand, within CA264_06345 at 1474.359 kb on - strand, within CA264_06345 at 1474.397 kb on + strand, within CA264_06345 at 1474.397 kb on + strand, within CA264_06345 at 1474.397 kb on + strand, within CA264_06345 at 1474.398 kb on - strand, within CA264_06345 at 1474.398 kb on - strand, within CA264_06345 at 1474.398 kb on - strand, within CA264_06345 at 1474.400 kb on + strand, within CA264_06345 at 1474.400 kb on + strand, within CA264_06345 at 1474.400 kb on + strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.402 kb on + strand, within CA264_06345
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,471,710 + CA264_06325 0.54 -1.0 1,471,711 - CA264_06325 0.54 -0.2 1,471,711 - CA264_06325 0.54 -0.6 1,471,766 - CA264_06325 0.65 +0.5 1,471,784 + CA264_06325 0.68 -0.1 1,471,784 + CA264_06325 0.68 -0.0 1,471,811 + CA264_06325 0.74 +0.4 1,471,812 - CA264_06325 0.74 +1.5 1,471,814 - CA264_06325 0.74 +0.5 1,471,819 + CA264_06325 0.76 -2.4 1,471,819 + CA264_06325 0.76 +0.9 1,471,819 + CA264_06325 0.76 -0.8 1,471,819 + CA264_06325 0.76 -0.7 1,471,843 - CA264_06325 0.80 +0.8 1,471,856 - CA264_06325 0.83 -1.5 1,471,856 - CA264_06325 0.83 -1.1 1,471,970 - CA264_06330 0.12 +0.5 1,471,980 + CA264_06330 0.16 +1.5 1,472,086 - CA264_06330 0.55 -0.4 1,472,181 - -1.1 1,472,183 + -3.0 1,472,188 + +0.3 1,472,189 - +0.8 1,472,189 - -0.7 1,472,189 - +0.1 1,472,197 + -1.1 1,472,224 - +0.1 1,472,224 - +0.7 1,472,226 - -0.6 1,472,330 - CA264_06335 0.27 -0.6 1,472,582 + CA264_06335 0.83 -0.5 1,472,600 - CA264_06335 0.87 +0.1 1,472,629 + -0.4 1,472,630 - -0.1 1,472,677 - -0.7 1,472,719 - CA264_06340 0.12 -0.8 1,472,799 - CA264_06340 0.22 -1.1 1,472,799 - CA264_06340 0.22 -1.4 1,472,807 - CA264_06340 0.23 -0.1 1,472,807 - CA264_06340 0.23 -0.7 1,472,807 - CA264_06340 0.23 +0.9 1,472,815 - CA264_06340 0.24 -1.4 1,472,838 + CA264_06340 0.26 +0.1 1,473,105 - CA264_06340 0.59 -0.8 1,473,137 - CA264_06340 0.63 -1.0 1,473,282 + CA264_06340 0.80 -0.4 1,473,295 + CA264_06340 0.82 -1.2 1,473,307 + CA264_06340 0.83 +0.4 1,473,375 - +1.5 1,473,466 - -0.2 1,473,472 + +0.5 1,473,473 - -0.3 1,473,473 - +0.4 1,473,501 + -1.5 1,473,503 + -0.4 1,473,503 + -0.4 1,473,504 - +0.3 1,473,511 - -0.1 1,473,524 - -1.5 1,473,524 - +0.1 1,473,524 - +1.1 1,473,622 + +0.6 1,473,623 - -0.2 1,473,643 + -0.7 1,473,663 - +1.4 1,473,674 - +1.9 1,473,789 + -0.4 1,473,789 + +0.8 1,473,789 + +1.0 1,473,789 + -0.2 1,473,790 - +1.1 1,473,794 + +1.3 1,473,990 - CA264_06345 0.19 +1.4 1,473,990 - CA264_06345 0.19 +0.6 1,474,089 - CA264_06345 0.24 +1.2 1,474,312 + CA264_06345 0.37 -0.1 1,474,313 - CA264_06345 0.37 +0.9 1,474,358 + CA264_06345 0.40 +0.8 1,474,358 + CA264_06345 0.40 +0.8 1,474,358 + CA264_06345 0.40 +0.7 1,474,359 - CA264_06345 0.40 +1.4 1,474,359 - CA264_06345 0.40 -0.8 1,474,359 - CA264_06345 0.40 +1.4 1,474,397 + CA264_06345 0.42 +0.0 1,474,397 + CA264_06345 0.42 -0.6 1,474,397 + CA264_06345 0.42 +0.5 1,474,398 - CA264_06345 0.42 +1.5 1,474,398 - CA264_06345 0.42 +1.1 1,474,398 - CA264_06345 0.42 +1.0 1,474,400 + CA264_06345 0.42 +2.8 1,474,400 + CA264_06345 0.42 +0.3 1,474,400 + CA264_06345 0.42 +1.1 1,474,401 - CA264_06345 0.42 +3.1 1,474,401 - CA264_06345 0.42 +1.3 1,474,401 - CA264_06345 0.42 +4.3 1,474,401 - CA264_06345 0.42 +0.4 1,474,402 + CA264_06345 0.42 +0.9
Or see this region's nucleotide sequence