Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06135 and CA264_06140 are separated by 202 nucleotides CA264_06140 and CA264_06145 are separated by 23 nucleotides
CA264_06135: CA264_06135 - alanine--tRNA ligase, at 1,432,299 to 1,434,935
_06135
CA264_06140: CA264_06140 - MerR family transcriptional regulator, at 1,435,138 to 1,435,485
_06140
CA264_06145: CA264_06145 - DNA protecting protein DprA, at 1,435,509 to 1,436,624
_06145
Position (kb)
1435
1436 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1434.947 kb on - strand at 1434.955 kb on - strand at 1434.955 kb on - strand at 1434.963 kb on - strand at 1434.971 kb on - strand at 1435.121 kb on - strand at 1435.174 kb on + strand, within CA264_06140 at 1435.174 kb on + strand, within CA264_06140 at 1435.174 kb on + strand, within CA264_06140 at 1435.175 kb on - strand, within CA264_06140 at 1435.175 kb on - strand, within CA264_06140 at 1435.176 kb on + strand, within CA264_06140 at 1435.177 kb on - strand, within CA264_06140 at 1435.177 kb on - strand, within CA264_06140 at 1435.177 kb on - strand, within CA264_06140 at 1435.288 kb on + strand, within CA264_06140 at 1435.318 kb on - strand, within CA264_06140 at 1435.351 kb on - strand, within CA264_06140 at 1435.484 kb on - strand at 1435.544 kb on + strand at 1435.545 kb on - strand at 1435.588 kb on + strand at 1435.594 kb on - strand at 1435.594 kb on - strand at 1435.750 kb on + strand, within CA264_06145 at 1435.751 kb on - strand, within CA264_06145 at 1435.767 kb on - strand, within CA264_06145 at 1435.824 kb on + strand, within CA264_06145 at 1435.864 kb on + strand, within CA264_06145 at 1435.865 kb on - strand, within CA264_06145 at 1435.873 kb on + strand, within CA264_06145 at 1435.874 kb on - strand, within CA264_06145 at 1435.889 kb on - strand, within CA264_06145 at 1435.896 kb on + strand, within CA264_06145 at 1435.925 kb on - strand, within CA264_06145 at 1435.943 kb on + strand, within CA264_06145 at 1435.944 kb on - strand, within CA264_06145 at 1436.080 kb on - strand, within CA264_06145 at 1436.204 kb on - strand, within CA264_06145 at 1436.260 kb on - strand, within CA264_06145 at 1436.352 kb on + strand, within CA264_06145 at 1436.352 kb on + strand, within CA264_06145 at 1436.434 kb on + strand, within CA264_06145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,434,947 - +0.3 1,434,955 - +0.5 1,434,955 - +1.4 1,434,963 - -1.0 1,434,971 - -0.9 1,435,121 - +0.5 1,435,174 + CA264_06140 0.10 -1.8 1,435,174 + CA264_06140 0.10 -0.6 1,435,174 + CA264_06140 0.10 -0.9 1,435,175 - CA264_06140 0.11 +0.5 1,435,175 - CA264_06140 0.11 -1.0 1,435,176 + CA264_06140 0.11 +0.6 1,435,177 - CA264_06140 0.11 -0.6 1,435,177 - CA264_06140 0.11 -0.2 1,435,177 - CA264_06140 0.11 -2.4 1,435,288 + CA264_06140 0.43 -0.9 1,435,318 - CA264_06140 0.52 -0.7 1,435,351 - CA264_06140 0.61 -1.8 1,435,484 - -0.1 1,435,544 + -0.6 1,435,545 - +0.7 1,435,588 + -0.4 1,435,594 - -0.2 1,435,594 - -0.8 1,435,750 + CA264_06145 0.22 +1.5 1,435,751 - CA264_06145 0.22 +0.5 1,435,767 - CA264_06145 0.23 +0.9 1,435,824 + CA264_06145 0.28 -1.0 1,435,864 + CA264_06145 0.32 -1.8 1,435,865 - CA264_06145 0.32 -0.8 1,435,873 + CA264_06145 0.33 -0.7 1,435,874 - CA264_06145 0.33 -1.5 1,435,889 - CA264_06145 0.34 -0.7 1,435,896 + CA264_06145 0.35 +1.1 1,435,925 - CA264_06145 0.37 -0.3 1,435,943 + CA264_06145 0.39 -0.5 1,435,944 - CA264_06145 0.39 -1.7 1,436,080 - CA264_06145 0.51 -3.3 1,436,204 - CA264_06145 0.62 -0.3 1,436,260 - CA264_06145 0.67 -1.2 1,436,352 + CA264_06145 0.76 +0.4 1,436,352 + CA264_06145 0.76 -0.8 1,436,434 + CA264_06145 0.83 -0.1
Or see this region's nucleotide sequence