Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04805 and CA264_04810 are separated by 31 nucleotides CA264_04810 and CA264_04815 are separated by 298 nucleotides
CA264_04805: CA264_04805 - membrane protein insertase YidC, at 1,110,994 to 1,112,823
_04805
CA264_04810: CA264_04810 - CTP synthetase, at 1,112,855 to 1,114,468
_04810
CA264_04815: CA264_04815 - ATP-dependent protease subunit HslV, at 1,114,767 to 1,115,309
_04815
Position (kb)
1112
1113
1114
1115 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1112.848 kb on - strand at 1112.857 kb on - strand at 1112.867 kb on - strand at 1112.867 kb on - strand at 1112.875 kb on + strand at 1112.876 kb on - strand at 1112.876 kb on - strand at 1112.876 kb on - strand at 1114.554 kb on - strand at 1114.559 kb on + strand at 1114.559 kb on + strand at 1114.560 kb on - strand at 1114.560 kb on - strand at 1114.568 kb on + strand at 1114.613 kb on + strand at 1114.614 kb on - strand at 1114.614 kb on - strand at 1114.614 kb on - strand at 1114.629 kb on + strand at 1114.629 kb on + strand at 1114.693 kb on - strand at 1114.699 kb on - strand at 1114.699 kb on - strand at 1114.714 kb on - strand at 1114.719 kb on - strand at 1114.736 kb on + strand at 1114.736 kb on + strand at 1114.737 kb on - strand at 1114.931 kb on + strand, within CA264_04815 at 1115.044 kb on - strand, within CA264_04815 at 1115.078 kb on + strand, within CA264_04815 at 1115.162 kb on + strand, within CA264_04815 at 1115.162 kb on + strand, within CA264_04815 at 1115.162 kb on + strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.192 kb on - strand, within CA264_04815 at 1115.243 kb on + strand, within CA264_04815 at 1115.244 kb on - strand, within CA264_04815 at 1115.264 kb on + strand at 1115.264 kb on + strand at 1115.264 kb on + strand at 1115.265 kb on - strand at 1115.265 kb on - strand at 1115.268 kb on + strand at 1115.268 kb on + strand at 1115.270 kb on + strand at 1115.337 kb on - strand at 1115.337 kb on - strand at 1115.365 kb on + strand at 1115.373 kb on - strand at 1115.417 kb on - strand at 1115.445 kb on - strand at 1115.447 kb on - strand at 1115.454 kb on - strand at 1115.454 kb on - strand at 1115.460 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,112,848 - -1.2 1,112,857 - -0.0 1,112,867 - -0.9 1,112,867 - -0.2 1,112,875 + +0.3 1,112,876 - -0.9 1,112,876 - -1.3 1,112,876 - -0.5 1,114,554 - +0.7 1,114,559 + +0.6 1,114,559 + +0.8 1,114,560 - +0.8 1,114,560 - -0.3 1,114,568 + +1.0 1,114,613 + +1.0 1,114,614 - -0.2 1,114,614 - +0.4 1,114,614 - -0.8 1,114,629 + +0.4 1,114,629 + -0.0 1,114,693 - +2.6 1,114,699 - +0.1 1,114,699 - +0.0 1,114,714 - -1.8 1,114,719 - +0.1 1,114,736 + +1.6 1,114,736 + -0.6 1,114,737 - -0.2 1,114,931 + CA264_04815 0.30 -0.1 1,115,044 - CA264_04815 0.51 -1.7 1,115,078 + CA264_04815 0.57 -0.5 1,115,162 + CA264_04815 0.73 -0.0 1,115,162 + CA264_04815 0.73 +1.3 1,115,162 + CA264_04815 0.73 -0.0 1,115,163 - CA264_04815 0.73 -0.4 1,115,163 - CA264_04815 0.73 -0.2 1,115,163 - CA264_04815 0.73 -1.4 1,115,163 - CA264_04815 0.73 +0.7 1,115,166 + CA264_04815 0.73 +0.5 1,115,166 + CA264_04815 0.73 +0.2 1,115,166 + CA264_04815 0.73 +0.4 1,115,166 + CA264_04815 0.73 +2.3 1,115,166 + CA264_04815 0.73 +1.1 1,115,167 - CA264_04815 0.74 +0.0 1,115,167 - CA264_04815 0.74 -1.0 1,115,167 - CA264_04815 0.74 -0.5 1,115,167 - CA264_04815 0.74 +0.6 1,115,167 - CA264_04815 0.74 -0.6 1,115,192 - CA264_04815 0.78 -0.4 1,115,243 + CA264_04815 0.88 +0.8 1,115,244 - CA264_04815 0.88 -0.1 1,115,264 + -0.2 1,115,264 + -0.9 1,115,264 + +0.5 1,115,265 - -0.3 1,115,265 - -1.0 1,115,268 + +1.3 1,115,268 + +0.4 1,115,270 + +0.9 1,115,337 - -2.0 1,115,337 - -1.2 1,115,365 + -0.4 1,115,373 - -1.0 1,115,417 - -0.6 1,115,445 - -0.3 1,115,447 - -2.0 1,115,454 - +1.3 1,115,454 - +0.6 1,115,460 + -0.6
Or see this region's nucleotide sequence