Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03475 and CA264_03480 are separated by 79 nucleotides CA264_03480 and CA264_03485 are separated by 249 nucleotides CA264_03485 and CA264_03490 are separated by 256 nucleotides
CA264_03475: CA264_03475 - oxidoreductase, at 810,490 to 811,362
_03475
CA264_03480: CA264_03480 - hypothetical protein, at 811,442 to 812,173
_03480
CA264_03485: CA264_03485 - dodecin, at 812,423 to 812,632
_03485
CA264_03490: CA264_03490 - hypothetical protein, at 812,889 to 813,335
_03490
Position (kb)
811
812
813 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 810.446 kb on - strand at 810.489 kb on + strand at 810.490 kb on - strand at 810.526 kb on + strand at 810.526 kb on + strand at 810.527 kb on - strand at 810.533 kb on + strand at 810.597 kb on - strand, within CA264_03475 at 810.635 kb on + strand, within CA264_03475 at 810.670 kb on - strand, within CA264_03475 at 811.019 kb on - strand, within CA264_03475 at 811.019 kb on - strand, within CA264_03475 at 811.048 kb on + strand, within CA264_03475 at 811.055 kb on + strand, within CA264_03475 at 811.055 kb on + strand, within CA264_03475 at 811.056 kb on - strand, within CA264_03475 at 811.056 kb on - strand, within CA264_03475 at 811.056 kb on - strand, within CA264_03475 at 811.114 kb on - strand, within CA264_03475 at 811.360 kb on + strand at 811.360 kb on + strand at 811.360 kb on + strand at 811.361 kb on - strand at 811.361 kb on - strand at 811.374 kb on + strand at 811.397 kb on + strand at 811.403 kb on + strand at 811.403 kb on + strand at 811.471 kb on - strand at 811.471 kb on - strand at 811.479 kb on + strand at 811.480 kb on - strand at 811.564 kb on - strand, within CA264_03480 at 811.641 kb on - strand, within CA264_03480 at 811.742 kb on + strand, within CA264_03480 at 811.762 kb on - strand, within CA264_03480 at 811.925 kb on - strand, within CA264_03480 at 811.983 kb on + strand, within CA264_03480 at 811.983 kb on + strand, within CA264_03480 at 811.983 kb on + strand, within CA264_03480 at 811.984 kb on - strand, within CA264_03480 at 811.984 kb on - strand, within CA264_03480 at 811.989 kb on - strand, within CA264_03480 at 812.024 kb on - strand, within CA264_03480 at 812.024 kb on - strand, within CA264_03480 at 812.041 kb on - strand, within CA264_03480 at 812.067 kb on - strand, within CA264_03480 at 812.161 kb on + strand at 812.161 kb on + strand at 812.173 kb on + strand at 812.174 kb on - strand at 812.184 kb on + strand at 812.184 kb on + strand at 812.185 kb on - strand at 812.186 kb on + strand at 812.186 kb on + strand at 812.186 kb on + strand at 812.186 kb on + strand at 812.187 kb on - strand at 812.187 kb on - strand at 812.211 kb on - strand at 812.217 kb on - strand at 812.219 kb on + strand at 812.277 kb on + strand at 812.278 kb on - strand at 812.281 kb on - strand at 812.316 kb on + strand at 812.335 kb on + strand at 812.344 kb on - strand at 812.354 kb on - strand at 812.425 kb on - strand at 812.438 kb on + strand at 812.512 kb on + strand, within CA264_03485 at 812.528 kb on - strand, within CA264_03485 at 812.613 kb on - strand at 812.613 kb on - strand at 812.616 kb on - strand at 812.616 kb on - strand at 812.632 kb on + strand at 812.633 kb on - strand at 812.641 kb on + strand at 812.641 kb on + strand at 812.755 kb on + strand at 812.756 kb on - strand at 812.756 kb on - strand at 812.756 kb on - strand at 812.756 kb on - strand at 812.760 kb on + strand at 812.761 kb on - strand at 812.763 kb on - strand at 812.772 kb on - strand at 812.789 kb on + strand at 812.789 kb on + strand at 812.789 kb on + strand at 812.789 kb on + strand at 812.790 kb on - strand at 812.852 kb on - strand at 813.022 kb on + strand, within CA264_03490 at 813.118 kb on + strand, within CA264_03490
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 810,446 - -1.6 810,489 + -2.2 810,490 - +0.7 810,526 + -1.2 810,526 + -0.9 810,527 - -0.2 810,533 + +0.2 810,597 - CA264_03475 0.12 +0.1 810,635 + CA264_03475 0.17 -1.1 810,670 - CA264_03475 0.21 +1.2 811,019 - CA264_03475 0.61 -1.2 811,019 - CA264_03475 0.61 -0.1 811,048 + CA264_03475 0.64 -2.1 811,055 + CA264_03475 0.65 +0.9 811,055 + CA264_03475 0.65 -1.3 811,056 - CA264_03475 0.65 -0.3 811,056 - CA264_03475 0.65 -0.3 811,056 - CA264_03475 0.65 -0.5 811,114 - CA264_03475 0.71 +0.0 811,360 + -1.2 811,360 + -0.8 811,360 + -0.7 811,361 - -0.4 811,361 - -0.1 811,374 + -1.7 811,397 + -0.5 811,403 + -1.1 811,403 + -0.6 811,471 - -0.8 811,471 - -1.4 811,479 + -0.3 811,480 - +0.3 811,564 - CA264_03480 0.17 +0.9 811,641 - CA264_03480 0.27 +0.6 811,742 + CA264_03480 0.41 -0.4 811,762 - CA264_03480 0.44 -1.8 811,925 - CA264_03480 0.66 -0.7 811,983 + CA264_03480 0.74 -0.1 811,983 + CA264_03480 0.74 +0.8 811,983 + CA264_03480 0.74 -1.4 811,984 - CA264_03480 0.74 +0.6 811,984 - CA264_03480 0.74 -0.5 811,989 - CA264_03480 0.75 -0.8 812,024 - CA264_03480 0.80 -1.0 812,024 - CA264_03480 0.80 +1.2 812,041 - CA264_03480 0.82 -1.0 812,067 - CA264_03480 0.85 +0.2 812,161 + -0.7 812,161 + -0.1 812,173 + +0.6 812,174 - -0.1 812,184 + -0.1 812,184 + +0.5 812,185 - -1.6 812,186 + -1.1 812,186 + -0.7 812,186 + +0.7 812,186 + +0.3 812,187 - -1.6 812,187 - -1.0 812,211 - -1.3 812,217 - -1.3 812,219 + -0.5 812,277 + -0.4 812,278 - -1.8 812,281 - -0.3 812,316 + -0.9 812,335 + -0.8 812,344 - +0.2 812,354 - -0.8 812,425 - -1.8 812,438 + +2.2 812,512 + CA264_03485 0.42 -0.5 812,528 - CA264_03485 0.50 -1.1 812,613 - -0.5 812,613 - -1.0 812,616 - -0.3 812,616 - +0.6 812,632 + +2.5 812,633 - +1.1 812,641 + -0.5 812,641 + -1.0 812,755 + -0.6 812,756 - +0.6 812,756 - +0.6 812,756 - -1.1 812,756 - -0.4 812,760 + -0.4 812,761 - -0.3 812,763 - -0.7 812,772 - -0.7 812,789 + +0.2 812,789 + +0.3 812,789 + -0.9 812,789 + -1.0 812,790 - -0.2 812,852 - +1.9 813,022 + CA264_03490 0.30 +0.4 813,118 + CA264_03490 0.51 -0.6
Or see this region's nucleotide sequence