Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02855 and CA264_02860 are separated by 60 nucleotides CA264_02860 and CA264_02865 are separated by 187 nucleotides CA264_02865 and CA264_02870 are separated by 71 nucleotides CA264_02870 and CA264_02875 are separated by 91 nucleotides
CA264_02855: CA264_02855 - metal-dependent phosphohydrolase, at 655,097 to 655,660
_02855
CA264_02860: CA264_02860 - hypothetical protein, at 655,721 to 655,912
_02860
CA264_02865: CA264_02865 - fatty acid hydroxylase, at 656,100 to 657,062
_02865
CA264_02870: CA264_02870 - hypothetical protein, at 657,134 to 657,571
_02870
CA264_02875: CA264_02875 - hypothetical protein, at 657,663 to 658,712
_02875
Position (kb)
656
657
658 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 655.106 kb on + strand at 655.106 kb on + strand at 655.106 kb on + strand at 655.107 kb on - strand at 655.262 kb on + strand, within CA264_02855 at 655.376 kb on + strand, within CA264_02855 at 655.432 kb on - strand, within CA264_02855 at 655.570 kb on - strand, within CA264_02855 at 655.594 kb on + strand, within CA264_02855 at 655.595 kb on - strand, within CA264_02855 at 655.597 kb on + strand, within CA264_02855 at 655.659 kb on - strand at 655.705 kb on - strand at 655.775 kb on + strand, within CA264_02860 at 655.788 kb on - strand, within CA264_02860 at 655.839 kb on - strand, within CA264_02860 at 655.846 kb on + strand, within CA264_02860 at 655.846 kb on + strand, within CA264_02860 at 655.912 kb on + strand at 655.912 kb on + strand at 655.941 kb on + strand at 655.942 kb on - strand at 656.068 kb on + strand at 656.074 kb on + strand at 656.075 kb on - strand at 656.082 kb on + strand at 656.083 kb on - strand at 656.113 kb on + strand at 656.132 kb on - strand at 656.163 kb on + strand at 656.164 kb on - strand at 656.164 kb on - strand at 656.217 kb on + strand, within CA264_02865 at 656.334 kb on - strand, within CA264_02865 at 656.337 kb on + strand, within CA264_02865 at 656.337 kb on + strand, within CA264_02865 at 656.338 kb on - strand, within CA264_02865 at 656.616 kb on + strand, within CA264_02865 at 656.616 kb on + strand, within CA264_02865 at 656.633 kb on + strand, within CA264_02865 at 656.634 kb on - strand, within CA264_02865 at 656.670 kb on + strand, within CA264_02865 at 656.671 kb on - strand, within CA264_02865 at 656.671 kb on - strand, within CA264_02865 at 656.671 kb on - strand, within CA264_02865 at 656.671 kb on - strand, within CA264_02865 at 656.681 kb on + strand, within CA264_02865 at 656.724 kb on + strand, within CA264_02865 at 656.739 kb on + strand, within CA264_02865 at 656.740 kb on - strand, within CA264_02865 at 656.804 kb on - strand, within CA264_02865 at 656.837 kb on + strand, within CA264_02865 at 656.838 kb on - strand, within CA264_02865 at 656.847 kb on + strand, within CA264_02865 at 656.930 kb on + strand, within CA264_02865 at 657.033 kb on + strand at 657.060 kb on + strand at 657.081 kb on + strand at 657.081 kb on + strand at 657.082 kb on - strand at 657.082 kb on - strand at 657.096 kb on - strand at 657.096 kb on - strand at 657.136 kb on - strand at 657.136 kb on - strand at 657.136 kb on - strand at 657.138 kb on + strand at 657.139 kb on - strand at 657.139 kb on - strand at 657.139 kb on - strand at 657.231 kb on + strand, within CA264_02870 at 657.266 kb on + strand, within CA264_02870 at 657.266 kb on + strand, within CA264_02870 at 657.267 kb on - strand, within CA264_02870 at 657.267 kb on - strand, within CA264_02870 at 657.267 kb on - strand, within CA264_02870 at 657.549 kb on - strand at 657.607 kb on + strand at 657.608 kb on - strand at 657.656 kb on - strand at 657.656 kb on - strand at 657.664 kb on + strand at 657.682 kb on + strand at 657.733 kb on + strand at 657.734 kb on - strand at 657.734 kb on - strand at 657.899 kb on - strand, within CA264_02875 at 657.899 kb on - strand, within CA264_02875 at 657.899 kb on - strand, within CA264_02875 at 657.905 kb on + strand, within CA264_02875 at 657.985 kb on + strand, within CA264_02875 at 658.042 kb on + strand, within CA264_02875 at 658.044 kb on + strand, within CA264_02875
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 655,106 + -0.7 655,106 + -0.7 655,106 + -1.1 655,107 - -0.6 655,262 + CA264_02855 0.29 +0.2 655,376 + CA264_02855 0.49 +0.5 655,432 - CA264_02855 0.59 -0.5 655,570 - CA264_02855 0.84 -0.7 655,594 + CA264_02855 0.88 -0.9 655,595 - CA264_02855 0.88 -0.9 655,597 + CA264_02855 0.89 -0.6 655,659 - -0.2 655,705 - -0.7 655,775 + CA264_02860 0.28 -0.8 655,788 - CA264_02860 0.35 -0.4 655,839 - CA264_02860 0.61 -1.3 655,846 + CA264_02860 0.65 -0.1 655,846 + CA264_02860 0.65 +0.1 655,912 + -0.6 655,912 + +0.7 655,941 + -2.1 655,942 - +0.3 656,068 + +0.7 656,074 + +0.3 656,075 - -0.4 656,082 + -0.3 656,083 - -1.0 656,113 + -0.2 656,132 - -0.0 656,163 + -0.8 656,164 - -1.1 656,164 - +0.5 656,217 + CA264_02865 0.12 +0.9 656,334 - CA264_02865 0.24 +0.2 656,337 + CA264_02865 0.25 -1.0 656,337 + CA264_02865 0.25 +0.0 656,338 - CA264_02865 0.25 -0.3 656,616 + CA264_02865 0.54 -0.6 656,616 + CA264_02865 0.54 -0.6 656,633 + CA264_02865 0.55 -0.6 656,634 - CA264_02865 0.55 -0.3 656,670 + CA264_02865 0.59 -1.8 656,671 - CA264_02865 0.59 -1.5 656,671 - CA264_02865 0.59 -0.5 656,671 - CA264_02865 0.59 +1.3 656,671 - CA264_02865 0.59 +1.8 656,681 + CA264_02865 0.60 -0.5 656,724 + CA264_02865 0.65 +1.0 656,739 + CA264_02865 0.66 -0.3 656,740 - CA264_02865 0.66 -1.0 656,804 - CA264_02865 0.73 +0.1 656,837 + CA264_02865 0.77 -0.6 656,838 - CA264_02865 0.77 -0.4 656,847 + CA264_02865 0.78 +1.8 656,930 + CA264_02865 0.86 +1.6 657,033 + -0.5 657,060 + -1.1 657,081 + -0.9 657,081 + -1.8 657,082 - -0.2 657,082 - -0.8 657,096 - +0.2 657,096 - -0.2 657,136 - -0.2 657,136 - -0.9 657,136 - +0.2 657,138 + +1.7 657,139 - -1.2 657,139 - +1.1 657,139 - -0.2 657,231 + CA264_02870 0.22 -1.0 657,266 + CA264_02870 0.30 -0.7 657,266 + CA264_02870 0.30 +0.2 657,267 - CA264_02870 0.30 -0.7 657,267 - CA264_02870 0.30 -1.7 657,267 - CA264_02870 0.30 -0.6 657,549 - -2.6 657,607 + -1.2 657,608 - -2.5 657,656 - -1.1 657,656 - -1.7 657,664 + +0.2 657,682 + -1.7 657,733 + -0.9 657,734 - -1.0 657,734 - -1.3 657,899 - CA264_02875 0.22 -0.0 657,899 - CA264_02875 0.22 -0.6 657,899 - CA264_02875 0.22 +0.4 657,905 + CA264_02875 0.23 +0.1 657,985 + CA264_02875 0.31 -1.1 658,042 + CA264_02875 0.36 -0.9 658,044 + CA264_02875 0.36 +1.0
Or see this region's nucleotide sequence