Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01150 and CA264_01155 are separated by 275 nucleotides CA264_01155 and CA264_01160 are separated by 222 nucleotides
CA264_01150: CA264_01150 - Maebl, at 253,310 to 254,116
_01150
CA264_01155: CA264_01155 - Zn-dependent protease, at 254,392 to 255,387
_01155
CA264_01160: CA264_01160 - peptidase M28 family protein, at 255,610 to 257,037
_01160
Position (kb) 254
255
256 Strain fitness (log2 ratio) -2
-1
0
1
2 at 253.454 kb on + strand, within CA264_01150 at 253.648 kb on + strand, within CA264_01150 at 253.681 kb on + strand, within CA264_01150 at 253.687 kb on + strand, within CA264_01150 at 253.697 kb on - strand, within CA264_01150 at 253.751 kb on + strand, within CA264_01150 at 253.751 kb on + strand, within CA264_01150 at 254.033 kb on + strand, within CA264_01150 at 254.033 kb on + strand, within CA264_01150 at 254.034 kb on - strand, within CA264_01150 at 254.034 kb on - strand, within CA264_01150 at 254.092 kb on + strand at 254.121 kb on - strand at 254.175 kb on + strand at 254.179 kb on + strand at 254.179 kb on + strand at 254.231 kb on + strand at 254.377 kb on + strand at 254.379 kb on + strand at 254.864 kb on + strand, within CA264_01155 at 255.063 kb on + strand, within CA264_01155 at 255.109 kb on + strand, within CA264_01155 at 255.220 kb on + strand, within CA264_01155 at 255.221 kb on - strand, within CA264_01155 at 255.257 kb on + strand, within CA264_01155 at 255.377 kb on + strand at 255.403 kb on - strand at 255.425 kb on + strand at 255.426 kb on - strand at 255.482 kb on + strand at 255.501 kb on - strand at 255.520 kb on + strand at 255.521 kb on - strand at 255.543 kb on + strand at 255.544 kb on - strand at 255.568 kb on + strand at 255.569 kb on - strand at 255.645 kb on - strand at 255.691 kb on + strand at 255.725 kb on - strand at 255.755 kb on - strand, within CA264_01160 at 255.755 kb on - strand, within CA264_01160 at 256.077 kb on + strand, within CA264_01160 at 256.091 kb on + strand, within CA264_01160 at 256.113 kb on + strand, within CA264_01160 at 256.116 kb on + strand, within CA264_01160 at 256.117 kb on - strand, within CA264_01160 at 256.367 kb on - strand, within CA264_01160
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 253,454 + CA264_01150 0.18 +1.0 253,648 + CA264_01150 0.42 +2.2 253,681 + CA264_01150 0.46 -0.2 253,687 + CA264_01150 0.47 +0.1 253,697 - CA264_01150 0.48 -0.5 253,751 + CA264_01150 0.55 +0.4 253,751 + CA264_01150 0.55 -0.1 254,033 + CA264_01150 0.90 -0.1 254,033 + CA264_01150 0.90 +0.3 254,034 - CA264_01150 0.90 +0.2 254,034 - CA264_01150 0.90 -1.5 254,092 + -0.3 254,121 - -0.3 254,175 + -0.5 254,179 + -0.9 254,179 + -1.3 254,231 + +0.0 254,377 + -0.8 254,379 + -0.9 254,864 + CA264_01155 0.47 -1.0 255,063 + CA264_01155 0.67 +0.2 255,109 + CA264_01155 0.72 -2.1 255,220 + CA264_01155 0.83 -0.6 255,221 - CA264_01155 0.83 -1.3 255,257 + CA264_01155 0.87 -0.1 255,377 + +0.4 255,403 - -1.3 255,425 + -0.6 255,426 - -0.1 255,482 + +0.0 255,501 - -1.3 255,520 + -0.6 255,521 - +1.4 255,543 + -0.5 255,544 - -1.9 255,568 + -1.0 255,569 - -1.2 255,645 - -1.1 255,691 + -0.1 255,725 - -1.3 255,755 - CA264_01160 0.10 -1.2 255,755 - CA264_01160 0.10 -0.9 256,077 + CA264_01160 0.33 -0.6 256,091 + CA264_01160 0.34 -1.3 256,113 + CA264_01160 0.35 +0.6 256,116 + CA264_01160 0.35 -1.0 256,117 - CA264_01160 0.36 -0.5 256,367 - CA264_01160 0.53 -0.1
Or see this region's nucleotide sequence