Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00385 and CA264_00390 are separated by 83 nucleotides CA264_00390 and CA264_00395 overlap by 4 nucleotides CA264_00395 and CA264_00400 are separated by 276 nucleotides CA264_00400 and CA264_00405 are separated by 29 nucleotides
CA264_00385: CA264_00385 - hypothetical protein, at 85,701 to 86,570
_00385
CA264_00390: CA264_00390 - N-acetyltransferase, at 86,654 to 87,136
_00390
CA264_00395: CA264_00395 - SAM-dependent methyltransferase, at 87,133 to 87,759
_00395
CA264_00400: CA264_00400 - alkyl hydroperoxide reductase, at 88,036 to 88,674
_00400
CA264_00405: CA264_00405 - transcriptional repressor, at 88,704 to 89,168
_00405
Position (kb)
87
88 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 86.267 kb on + strand, within CA264_00385 at 86.267 kb on + strand, within CA264_00385 at 86.267 kb on + strand, within CA264_00385 at 86.268 kb on - strand, within CA264_00385 at 86.300 kb on + strand, within CA264_00385 at 86.301 kb on - strand, within CA264_00385 at 86.304 kb on + strand, within CA264_00385 at 86.346 kb on - strand, within CA264_00385 at 86.350 kb on - strand, within CA264_00385 at 86.350 kb on - strand, within CA264_00385 at 86.366 kb on - strand, within CA264_00385 at 86.486 kb on - strand at 86.486 kb on - strand at 86.633 kb on + strand at 86.648 kb on - strand at 86.653 kb on + strand at 86.653 kb on + strand at 86.653 kb on + strand at 86.653 kb on + strand at 86.654 kb on - strand at 86.734 kb on + strand, within CA264_00390 at 86.760 kb on - strand, within CA264_00390 at 86.786 kb on + strand, within CA264_00390 at 86.844 kb on + strand, within CA264_00390 at 86.847 kb on + strand, within CA264_00390 at 86.847 kb on + strand, within CA264_00390 at 86.848 kb on - strand, within CA264_00390 at 86.913 kb on - strand, within CA264_00390 at 86.968 kb on + strand, within CA264_00390 at 86.994 kb on - strand, within CA264_00390 at 87.006 kb on - strand, within CA264_00390 at 87.009 kb on + strand, within CA264_00390 at 87.040 kb on - strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.043 kb on + strand, within CA264_00390 at 87.044 kb on - strand, within CA264_00390 at 87.044 kb on - strand, within CA264_00390 at 87.044 kb on - strand, within CA264_00390 at 87.044 kb on - strand, within CA264_00390 at 87.132 kb on + strand at 87.132 kb on + strand at 87.133 kb on - strand at 87.139 kb on - strand at 87.326 kb on + strand, within CA264_00395 at 87.326 kb on + strand, within CA264_00395 at 87.326 kb on + strand, within CA264_00395 at 87.326 kb on + strand, within CA264_00395 at 87.436 kb on + strand, within CA264_00395 at 87.437 kb on - strand, within CA264_00395 at 87.453 kb on + strand, within CA264_00395 at 87.489 kb on + strand, within CA264_00395 at 87.490 kb on - strand, within CA264_00395 at 87.534 kb on - strand, within CA264_00395 at 87.535 kb on + strand, within CA264_00395 at 87.536 kb on - strand, within CA264_00395 at 87.565 kb on + strand, within CA264_00395 at 87.566 kb on - strand, within CA264_00395 at 87.566 kb on - strand, within CA264_00395 at 87.623 kb on - strand, within CA264_00395 at 87.623 kb on - strand, within CA264_00395 at 87.635 kb on + strand, within CA264_00395 at 87.680 kb on + strand, within CA264_00395 at 87.680 kb on + strand, within CA264_00395 at 87.681 kb on - strand, within CA264_00395 at 87.694 kb on + strand, within CA264_00395 at 87.781 kb on + strand at 87.782 kb on - strand at 87.782 kb on - strand at 87.782 kb on - strand at 87.826 kb on - strand at 87.826 kb on - strand at 87.826 kb on - strand at 87.937 kb on - strand at 87.961 kb on - strand at 88.018 kb on + strand at 88.062 kb on - strand at 88.065 kb on + strand at 88.069 kb on + strand at 88.093 kb on - strand at 88.226 kb on - strand, within CA264_00400 at 88.280 kb on - strand, within CA264_00400 at 88.348 kb on - strand, within CA264_00400 at 88.376 kb on + strand, within CA264_00400 at 88.551 kb on - strand, within CA264_00400 at 88.663 kb on + strand at 88.663 kb on + strand at 88.663 kb on + strand at 88.722 kb on - strand at 88.728 kb on + strand at 88.729 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 86,267 + CA264_00385 0.65 -0.5 86,267 + CA264_00385 0.65 +0.2 86,267 + CA264_00385 0.65 -0.4 86,268 - CA264_00385 0.65 -0.7 86,300 + CA264_00385 0.69 -0.7 86,301 - CA264_00385 0.69 -0.1 86,304 + CA264_00385 0.69 +0.1 86,346 - CA264_00385 0.74 -2.0 86,350 - CA264_00385 0.75 -0.3 86,350 - CA264_00385 0.75 -0.4 86,366 - CA264_00385 0.76 -0.1 86,486 - -1.2 86,486 - +0.8 86,633 + -0.0 86,648 - -0.8 86,653 + +0.2 86,653 + -0.5 86,653 + -0.7 86,653 + -1.0 86,654 - +0.9 86,734 + CA264_00390 0.17 -0.6 86,760 - CA264_00390 0.22 -0.6 86,786 + CA264_00390 0.27 -1.1 86,844 + CA264_00390 0.39 -0.6 86,847 + CA264_00390 0.40 +0.4 86,847 + CA264_00390 0.40 +0.1 86,848 - CA264_00390 0.40 -0.2 86,913 - CA264_00390 0.54 -2.0 86,968 + CA264_00390 0.65 -1.4 86,994 - CA264_00390 0.70 -0.8 87,006 - CA264_00390 0.73 +0.0 87,009 + CA264_00390 0.73 -0.5 87,040 - CA264_00390 0.80 -0.6 87,043 + CA264_00390 0.81 -1.8 87,043 + CA264_00390 0.81 -1.3 87,043 + CA264_00390 0.81 +0.1 87,043 + CA264_00390 0.81 -0.4 87,043 + CA264_00390 0.81 -0.4 87,043 + CA264_00390 0.81 +0.1 87,043 + CA264_00390 0.81 +1.0 87,043 + CA264_00390 0.81 -1.5 87,043 + CA264_00390 0.81 -0.6 87,043 + CA264_00390 0.81 -0.7 87,043 + CA264_00390 0.81 +1.0 87,044 - CA264_00390 0.81 +0.0 87,044 - CA264_00390 0.81 -2.7 87,044 - CA264_00390 0.81 +0.4 87,044 - CA264_00390 0.81 -0.6 87,132 + -0.4 87,132 + -2.3 87,133 - -0.2 87,139 - +0.1 87,326 + CA264_00395 0.31 +0.7 87,326 + CA264_00395 0.31 +0.2 87,326 + CA264_00395 0.31 +0.4 87,326 + CA264_00395 0.31 -1.1 87,436 + CA264_00395 0.48 -0.9 87,437 - CA264_00395 0.48 +0.7 87,453 + CA264_00395 0.51 +0.2 87,489 + CA264_00395 0.57 +0.6 87,490 - CA264_00395 0.57 +0.2 87,534 - CA264_00395 0.64 +0.3 87,535 + CA264_00395 0.64 -0.7 87,536 - CA264_00395 0.64 -0.8 87,565 + CA264_00395 0.69 -0.9 87,566 - CA264_00395 0.69 +0.5 87,566 - CA264_00395 0.69 +0.2 87,623 - CA264_00395 0.78 -0.6 87,623 - CA264_00395 0.78 +0.1 87,635 + CA264_00395 0.80 +0.9 87,680 + CA264_00395 0.87 -0.0 87,680 + CA264_00395 0.87 -0.6 87,681 - CA264_00395 0.87 -0.7 87,694 + CA264_00395 0.89 +0.2 87,781 + -0.6 87,782 - -0.4 87,782 - +0.8 87,782 - -0.4 87,826 - -0.9 87,826 - -0.6 87,826 - +1.8 87,937 - -0.8 87,961 - -0.7 88,018 + -0.8 88,062 - -1.3 88,065 + -1.5 88,069 + -1.8 88,093 - -3.3 88,226 - CA264_00400 0.30 +1.3 88,280 - CA264_00400 0.38 -2.3 88,348 - CA264_00400 0.49 -1.3 88,376 + CA264_00400 0.53 -2.6 88,551 - CA264_00400 0.81 +0.2 88,663 + -2.6 88,663 + -1.7 88,663 + -1.3 88,722 - -0.4 88,728 + -2.6 88,729 - -1.3
Or see this region's nucleotide sequence