Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00290 and CA264_00295 are separated by 95 nucleotides CA264_00295 and CA264_00300 are separated by 176 nucleotides
CA264_00290: CA264_00290 - acyl-ACP desaturase, at 68,977 to 69,957
_00290
CA264_00295: CA264_00295 - hypothetical protein, at 70,053 to 70,334
_00295
CA264_00300: CA264_00300 - VWA domain-containing protein, at 70,511 to 71,611
_00300
Position (kb)
70
71 Strain fitness (log2 ratio)
-2
-1
0
1 at 69.982 kb on + strand at 69.982 kb on + strand at 69.982 kb on + strand at 69.982 kb on + strand at 69.982 kb on + strand at 69.983 kb on - strand at 69.983 kb on - strand at 69.983 kb on - strand at 70.006 kb on + strand at 70.007 kb on - strand at 70.008 kb on + strand at 70.008 kb on + strand at 70.008 kb on + strand at 70.009 kb on - strand at 70.009 kb on - strand at 70.009 kb on - strand at 70.015 kb on + strand at 70.055 kb on - strand at 70.091 kb on - strand, within CA264_00295 at 70.097 kb on + strand, within CA264_00295 at 70.177 kb on + strand, within CA264_00295 at 70.180 kb on + strand, within CA264_00295 at 70.180 kb on + strand, within CA264_00295 at 70.181 kb on - strand, within CA264_00295 at 70.308 kb on + strand at 70.308 kb on + strand at 70.360 kb on + strand at 70.360 kb on + strand at 70.360 kb on + strand at 70.361 kb on - strand at 70.361 kb on - strand at 70.361 kb on - strand at 70.361 kb on - strand at 70.365 kb on + strand at 70.366 kb on - strand at 70.366 kb on - strand at 70.366 kb on - strand at 70.395 kb on + strand at 70.396 kb on - strand at 70.497 kb on + strand at 70.497 kb on + strand at 70.510 kb on + strand at 70.518 kb on + strand at 70.518 kb on + strand at 70.519 kb on - strand at 70.519 kb on - strand at 70.558 kb on + strand at 70.559 kb on - strand at 70.592 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 69,982 + -0.1 69,982 + -1.8 69,982 + -0.9 69,982 + -0.9 69,982 + -0.3 69,983 - -1.9 69,983 - -0.9 69,983 - -0.9 70,006 + -1.2 70,007 - -0.7 70,008 + -1.4 70,008 + -0.6 70,008 + -1.1 70,009 - -1.5 70,009 - -1.4 70,009 - -1.2 70,015 + -0.9 70,055 - -0.3 70,091 - CA264_00295 0.13 -1.0 70,097 + CA264_00295 0.16 -0.7 70,177 + CA264_00295 0.44 -0.6 70,180 + CA264_00295 0.45 +0.7 70,180 + CA264_00295 0.45 -1.1 70,181 - CA264_00295 0.45 -0.3 70,308 + -0.7 70,308 + +0.9 70,360 + -0.9 70,360 + -1.1 70,360 + -0.1 70,361 - -0.8 70,361 - -0.3 70,361 - -0.6 70,361 - -2.7 70,365 + -0.5 70,366 - +0.2 70,366 - +0.4 70,366 - -1.4 70,395 + -1.9 70,396 - -0.6 70,497 + -1.1 70,497 + -1.5 70,510 + -1.1 70,518 + +1.3 70,518 + -0.3 70,519 - -0.3 70,519 - +0.2 70,558 + +0.8 70,559 - -1.2 70,592 - -0.2
Or see this region's nucleotide sequence