Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20870 and CA264_20875 are separated by 397 nucleotides CA264_20875 and CA264_20880 are separated by 78 nucleotides
CA264_20870: CA264_20870 - addiction module protein, at 36,491 to 37,606
_20870
CA264_20875: CA264_20875 - resolvase, at 38,004 to 38,693
_20875
CA264_20880: CA264_20880 - hypothetical protein, at 38,772 to 39,953
_20880
Position (kb) 38
39 Strain fitness (log2 ratio) -1
0
1
2 at 37.067 kb on + strand, within CA264_20870 at 37.068 kb on - strand, within CA264_20870 at 37.068 kb on - strand, within CA264_20870 at 37.093 kb on + strand, within CA264_20870 at 37.093 kb on + strand, within CA264_20870 at 37.094 kb on - strand, within CA264_20870 at 37.094 kb on - strand, within CA264_20870 at 37.110 kb on - strand, within CA264_20870 at 37.137 kb on + strand, within CA264_20870 at 37.138 kb on - strand, within CA264_20870 at 37.149 kb on - strand, within CA264_20870 at 37.160 kb on + strand, within CA264_20870 at 37.161 kb on - strand, within CA264_20870 at 37.355 kb on + strand, within CA264_20870 at 37.394 kb on + strand, within CA264_20870 at 37.394 kb on + strand, within CA264_20870 at 37.413 kb on + strand, within CA264_20870 at 37.413 kb on + strand, within CA264_20870 at 37.476 kb on + strand, within CA264_20870 at 37.476 kb on + strand, within CA264_20870 at 37.515 kb on - strand at 37.515 kb on - strand at 37.515 kb on - strand at 37.518 kb on - strand at 37.518 kb on - strand at 37.565 kb on + strand at 37.566 kb on - strand at 37.566 kb on - strand at 37.604 kb on + strand at 37.604 kb on + strand at 37.607 kb on + strand at 37.607 kb on + strand at 37.607 kb on + strand at 37.608 kb on - strand at 37.679 kb on + strand at 37.680 kb on - strand at 37.712 kb on + strand at 37.712 kb on + strand at 37.712 kb on + strand at 37.713 kb on - strand at 37.713 kb on - strand at 37.713 kb on - strand at 37.716 kb on + strand at 37.720 kb on + strand at 37.721 kb on - strand at 37.781 kb on - strand at 37.781 kb on - strand at 37.840 kb on - strand at 37.922 kb on - strand at 37.983 kb on - strand at 37.984 kb on + strand at 37.986 kb on + strand at 37.986 kb on + strand at 37.986 kb on + strand at 37.990 kb on - strand at 37.990 kb on - strand at 38.010 kb on + strand at 38.170 kb on + strand, within CA264_20875 at 38.261 kb on + strand, within CA264_20875 at 38.473 kb on + strand, within CA264_20875 at 38.556 kb on + strand, within CA264_20875 at 38.556 kb on + strand, within CA264_20875 at 38.700 kb on + strand at 38.701 kb on - strand at 38.703 kb on - strand at 38.707 kb on - strand at 38.709 kb on - strand at 38.736 kb on + strand at 38.736 kb on + strand at 38.737 kb on - strand at 38.737 kb on - strand at 38.745 kb on + strand at 38.761 kb on - strand at 38.761 kb on - strand at 38.771 kb on + strand at 38.772 kb on - strand at 38.782 kb on + strand at 38.782 kb on + strand at 38.783 kb on - strand at 38.787 kb on - strand at 38.905 kb on + strand, within CA264_20880 at 38.912 kb on + strand, within CA264_20880 at 39.001 kb on + strand, within CA264_20880 at 39.086 kb on + strand, within CA264_20880 at 39.100 kb on - strand, within CA264_20880 at 39.100 kb on - strand, within CA264_20880 at 39.102 kb on - strand, within CA264_20880 at 39.105 kb on + strand, within CA264_20880 at 39.210 kb on + strand, within CA264_20880 at 39.210 kb on + strand, within CA264_20880 at 39.221 kb on + strand, within CA264_20880 at 39.228 kb on - strand, within CA264_20880 at 39.262 kb on - strand, within CA264_20880 at 39.329 kb on - strand, within CA264_20880 at 39.427 kb on + strand, within CA264_20880 at 39.436 kb on - strand, within CA264_20880 at 39.479 kb on + strand, within CA264_20880 at 39.491 kb on - strand, within CA264_20880
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 37,067 + CA264_20870 0.52 -0.1 37,068 - CA264_20870 0.52 -0.1 37,068 - CA264_20870 0.52 -0.6 37,093 + CA264_20870 0.54 -0.2 37,093 + CA264_20870 0.54 +1.2 37,094 - CA264_20870 0.54 -0.1 37,094 - CA264_20870 0.54 -0.0 37,110 - CA264_20870 0.55 +0.8 37,137 + CA264_20870 0.58 +0.9 37,138 - CA264_20870 0.58 -0.3 37,149 - CA264_20870 0.59 +0.0 37,160 + CA264_20870 0.60 -0.4 37,161 - CA264_20870 0.60 -0.0 37,355 + CA264_20870 0.77 -0.2 37,394 + CA264_20870 0.81 -0.4 37,394 + CA264_20870 0.81 -0.8 37,413 + CA264_20870 0.83 -0.5 37,413 + CA264_20870 0.83 -0.2 37,476 + CA264_20870 0.88 +0.2 37,476 + CA264_20870 0.88 -1.0 37,515 - +0.2 37,515 - -0.6 37,515 - -1.7 37,518 - +0.2 37,518 - +0.2 37,565 + -0.3 37,566 - +0.5 37,566 - +0.3 37,604 + -0.8 37,604 + -0.4 37,607 + +0.2 37,607 + -0.6 37,607 + +0.1 37,608 - +0.0 37,679 + +0.3 37,680 - -1.5 37,712 + +0.3 37,712 + -0.8 37,712 + -0.2 37,713 - -0.3 37,713 - +0.6 37,713 - -0.8 37,716 + -0.1 37,720 + +0.3 37,721 - -0.4 37,781 - -0.3 37,781 - +0.1 37,840 - +0.6 37,922 - +2.0 37,983 - -0.5 37,984 + -0.1 37,986 + -0.3 37,986 + -0.0 37,986 + -0.4 37,990 - +0.0 37,990 - -0.2 38,010 + -1.3 38,170 + CA264_20875 0.24 -0.0 38,261 + CA264_20875 0.37 +0.2 38,473 + CA264_20875 0.68 +0.1 38,556 + CA264_20875 0.80 -0.3 38,556 + CA264_20875 0.80 -0.7 38,700 + -0.8 38,701 - +0.5 38,703 - -0.1 38,707 - -1.6 38,709 - -0.4 38,736 + -0.6 38,736 + -0.2 38,737 - -1.0 38,737 - -0.2 38,745 + -0.9 38,761 - -0.5 38,761 - -0.1 38,771 + -0.6 38,772 - +0.7 38,782 + -0.5 38,782 + -0.6 38,783 - +0.6 38,787 - +0.2 38,905 + CA264_20880 0.11 -0.3 38,912 + CA264_20880 0.12 +0.4 39,001 + CA264_20880 0.19 +0.0 39,086 + CA264_20880 0.27 +0.0 39,100 - CA264_20880 0.28 -0.4 39,100 - CA264_20880 0.28 +0.4 39,102 - CA264_20880 0.28 -0.1 39,105 + CA264_20880 0.28 +0.7 39,210 + CA264_20880 0.37 -0.2 39,210 + CA264_20880 0.37 +0.4 39,221 + CA264_20880 0.38 +0.1 39,228 - CA264_20880 0.39 +2.0 39,262 - CA264_20880 0.41 -0.3 39,329 - CA264_20880 0.47 -0.1 39,427 + CA264_20880 0.55 +0.1 39,436 - CA264_20880 0.56 +0.1 39,479 + CA264_20880 0.60 +1.1 39,491 - CA264_20880 0.61 +0.1
Or see this region's nucleotide sequence