Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20455 and CA264_20460 are separated by 280 nucleotides CA264_20460 and CA264_20465 are separated by 168 nucleotides CA264_20465 and CA264_20470 are separated by 11 nucleotides CA264_20470 and CA264_20475 are separated by 297 nucleotides
CA264_20455: CA264_20455 - LLM class flavin-dependent oxidoreductase, at 4,714,421 to 4,715,464
_20455
CA264_20460: CA264_20460 - hypothetical protein, at 4,715,745 to 4,716,116
_20460
CA264_20465: CA264_20465 - aspartate carbamoyltransferase, at 4,716,285 to 4,717,208
_20465
CA264_20470: CA264_20470 - bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase, at 4,717,220 to 4,717,768
_20470
CA264_20475: CA264_20475 - hypothetical protein, at 4,718,066 to 4,719,550
_20475
Position (kb) 4716
4717
4718 Strain fitness (log2 ratio) -1
0
1
2 at 4715.384 kb on + strand at 4715.384 kb on + strand at 4715.386 kb on + strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.477 kb on - strand at 4715.490 kb on + strand at 4715.515 kb on + strand at 4715.526 kb on + strand at 4715.527 kb on - strand at 4715.527 kb on - strand at 4715.529 kb on - strand at 4715.595 kb on + strand at 4715.595 kb on + strand at 4715.606 kb on - strand at 4715.606 kb on - strand at 4715.618 kb on + strand at 4715.619 kb on - strand at 4715.621 kb on + strand at 4715.622 kb on - strand at 4715.625 kb on + strand at 4715.649 kb on + strand at 4715.650 kb on - strand at 4715.771 kb on + strand at 4715.853 kb on + strand, within CA264_20460 at 4715.892 kb on - strand, within CA264_20460 at 4715.912 kb on + strand, within CA264_20460 at 4715.913 kb on - strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.030 kb on - strand, within CA264_20460 at 4716.105 kb on - strand at 4716.139 kb on - strand at 4716.257 kb on + strand at 4716.307 kb on + strand at 4716.312 kb on + strand at 4716.408 kb on - strand, within CA264_20465 at 4716.410 kb on + strand, within CA264_20465 at 4717.329 kb on + strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.360 kb on - strand, within CA264_20470 at 4717.370 kb on + strand, within CA264_20470 at 4717.371 kb on - strand, within CA264_20470 at 4717.371 kb on - strand, within CA264_20470 at 4717.388 kb on + strand, within CA264_20470 at 4717.586 kb on + strand, within CA264_20470 at 4717.587 kb on - strand, within CA264_20470 at 4717.639 kb on - strand, within CA264_20470 at 4717.639 kb on - strand, within CA264_20470 at 4717.639 kb on - strand, within CA264_20470 at 4717.749 kb on - strand at 4717.782 kb on + strand at 4717.782 kb on + strand at 4717.783 kb on - strand at 4717.794 kb on + strand at 4717.794 kb on + strand at 4717.874 kb on + strand at 4717.875 kb on - strand at 4718.058 kb on + strand at 4718.058 kb on + strand at 4718.059 kb on - strand at 4718.088 kb on + strand at 4718.088 kb on + strand at 4718.089 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,715,384 + -0.7 4,715,384 + -1.4 4,715,386 + +1.0 4,715,387 - +0.4 4,715,387 - -1.5 4,715,387 - +1.3 4,715,387 - -0.4 4,715,387 - -0.9 4,715,477 - -0.4 4,715,490 + -0.3 4,715,515 + -0.3 4,715,526 + -0.6 4,715,527 - -0.3 4,715,527 - -0.7 4,715,529 - -1.4 4,715,595 + +0.6 4,715,595 + +1.0 4,715,606 - -0.0 4,715,606 - +0.4 4,715,618 + -0.3 4,715,619 - -0.5 4,715,621 + -0.7 4,715,622 - -0.4 4,715,625 + +0.4 4,715,649 + -0.3 4,715,650 - -1.0 4,715,771 + -0.2 4,715,853 + CA264_20460 0.29 +0.3 4,715,892 - CA264_20460 0.40 -0.0 4,715,912 + CA264_20460 0.45 -0.2 4,715,913 - CA264_20460 0.45 -0.1 4,716,029 + CA264_20460 0.76 +0.2 4,716,029 + CA264_20460 0.76 +0.6 4,716,030 - CA264_20460 0.77 +0.7 4,716,105 - -0.1 4,716,139 - +0.1 4,716,257 + -0.4 4,716,307 + +1.3 4,716,312 + +0.8 4,716,408 - CA264_20465 0.13 -1.1 4,716,410 + CA264_20465 0.14 -0.9 4,717,329 + CA264_20470 0.20 -0.9 4,717,330 - CA264_20470 0.20 +0.3 4,717,330 - CA264_20470 0.20 -1.0 4,717,330 - CA264_20470 0.20 +0.4 4,717,330 - CA264_20470 0.20 +0.7 4,717,360 - CA264_20470 0.26 -0.7 4,717,370 + CA264_20470 0.27 +0.1 4,717,371 - CA264_20470 0.28 +0.1 4,717,371 - CA264_20470 0.28 +2.0 4,717,388 + CA264_20470 0.31 +0.5 4,717,586 + CA264_20470 0.67 -0.2 4,717,587 - CA264_20470 0.67 -0.0 4,717,639 - CA264_20470 0.76 -0.8 4,717,639 - CA264_20470 0.76 +0.4 4,717,639 - CA264_20470 0.76 -0.5 4,717,749 - -1.5 4,717,782 + +0.5 4,717,782 + -0.4 4,717,783 - +0.4 4,717,794 + +1.1 4,717,794 + +1.1 4,717,874 + +1.0 4,717,875 - +0.1 4,718,058 + -0.3 4,718,058 + -0.3 4,718,059 - -0.3 4,718,088 + -0.3 4,718,088 + +0.1 4,718,089 - -0.7
Or see this region's nucleotide sequence