Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20090 and CA264_20095 overlap by 28 nucleotides CA264_20095 and CA264_20100 are separated by 111 nucleotides
CA264_20090: CA264_20090 - hypothetical protein, at 4,632,099 to 4,633,001
_20090
CA264_20095: CA264_20095 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 4,632,974 to 4,633,816
_20095
CA264_20100: CA264_20100 - mannose-1-phosphate guanylyltransferase, at 4,633,928 to 4,635,004
_20100
Position (kb)
4632
4633
4634 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4631.986 kb on - strand at 4631.992 kb on - strand at 4632.068 kb on - strand at 4632.076 kb on + strand at 4632.077 kb on - strand at 4632.077 kb on - strand at 4632.077 kb on - strand at 4632.195 kb on - strand, within CA264_20090 at 4632.195 kb on - strand, within CA264_20090 at 4632.425 kb on + strand, within CA264_20090 at 4632.464 kb on + strand, within CA264_20090 at 4632.465 kb on - strand, within CA264_20090 at 4632.488 kb on + strand, within CA264_20090 at 4632.537 kb on + strand, within CA264_20090 at 4632.547 kb on + strand, within CA264_20090 at 4632.705 kb on + strand, within CA264_20090 at 4632.706 kb on - strand, within CA264_20090 at 4632.706 kb on - strand, within CA264_20090 at 4632.706 kb on - strand, within CA264_20090 at 4632.708 kb on + strand, within CA264_20090 at 4632.708 kb on + strand, within CA264_20090 at 4632.709 kb on - strand, within CA264_20090 at 4632.709 kb on - strand, within CA264_20090 at 4632.709 kb on - strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.782 kb on - strand, within CA264_20090 at 4632.782 kb on - strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.784 kb on - strand, within CA264_20090 at 4632.792 kb on + strand, within CA264_20090 at 4632.899 kb on + strand, within CA264_20090 at 4633.156 kb on - strand, within CA264_20095 at 4633.252 kb on + strand, within CA264_20095 at 4633.264 kb on + strand, within CA264_20095 at 4633.332 kb on + strand, within CA264_20095 at 4633.333 kb on - strand, within CA264_20095 at 4633.524 kb on - strand, within CA264_20095 at 4633.590 kb on - strand, within CA264_20095 at 4633.785 kb on - strand at 4633.815 kb on - strand at 4633.840 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,631,986 - -0.1 4,631,992 - +0.1 4,632,068 - +0.5 4,632,076 + +0.0 4,632,077 - +0.7 4,632,077 - +2.9 4,632,077 - -1.2 4,632,195 - CA264_20090 0.11 -0.8 4,632,195 - CA264_20090 0.11 +0.2 4,632,425 + CA264_20090 0.36 -0.1 4,632,464 + CA264_20090 0.40 -0.1 4,632,465 - CA264_20090 0.41 -1.2 4,632,488 + CA264_20090 0.43 +1.1 4,632,537 + CA264_20090 0.49 -0.4 4,632,547 + CA264_20090 0.50 +0.5 4,632,705 + CA264_20090 0.67 +0.7 4,632,706 - CA264_20090 0.67 -1.2 4,632,706 - CA264_20090 0.67 +0.7 4,632,706 - CA264_20090 0.67 -0.2 4,632,708 + CA264_20090 0.67 +0.1 4,632,708 + CA264_20090 0.67 -1.9 4,632,709 - CA264_20090 0.68 +0.5 4,632,709 - CA264_20090 0.68 -0.6 4,632,709 - CA264_20090 0.68 -0.3 4,632,781 + CA264_20090 0.76 -1.2 4,632,781 + CA264_20090 0.76 +1.3 4,632,781 + CA264_20090 0.76 -0.7 4,632,781 + CA264_20090 0.76 +0.7 4,632,782 - CA264_20090 0.76 +0.1 4,632,782 - CA264_20090 0.76 +0.4 4,632,783 + CA264_20090 0.76 +1.1 4,632,783 + CA264_20090 0.76 -1.0 4,632,783 + CA264_20090 0.76 +0.3 4,632,783 + CA264_20090 0.76 -0.2 4,632,783 + CA264_20090 0.76 -0.1 4,632,783 + CA264_20090 0.76 +1.3 4,632,784 - CA264_20090 0.76 -0.1 4,632,792 + CA264_20090 0.77 -0.1 4,632,899 + CA264_20090 0.89 -0.4 4,633,156 - CA264_20095 0.22 +0.6 4,633,252 + CA264_20095 0.33 +1.6 4,633,264 + CA264_20095 0.34 +1.8 4,633,332 + CA264_20095 0.42 +1.8 4,633,333 - CA264_20095 0.43 -0.3 4,633,524 - CA264_20095 0.65 +1.2 4,633,590 - CA264_20095 0.73 +1.1 4,633,785 - -0.9 4,633,815 - +0.6 4,633,840 - -0.3
Or see this region's nucleotide sequence