Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19955 and CA264_19960 are separated by 69 nucleotides CA264_19960 and CA264_19965 are separated by 62 nucleotides CA264_19965 and CA264_19970 are separated by 203 nucleotides CA264_19970 and CA264_19975 are separated by 14 nucleotides
CA264_19955: CA264_19955 - SAM-dependent methyltransferase, at 4,600,235 to 4,601,074
_19955
CA264_19960: CA264_19960 - NUDIX hydrolase, at 4,601,144 to 4,601,623
_19960
CA264_19965: CA264_19965 - dipeptidyl aminopeptidase, at 4,601,686 to 4,602,768
_19965
CA264_19970: CA264_19970 - hypothetical protein, at 4,602,972 to 4,603,226
_19970
CA264_19975: CA264_19975 - hypothetical protein, at 4,603,241 to 4,607,191
_19975
Position (kb)
4601
4602
4603 Strain fitness (log2 ratio)
-2
-1
0
1 at 4600.744 kb on + strand, within CA264_19955 at 4600.816 kb on - strand, within CA264_19955 at 4600.848 kb on + strand, within CA264_19955 at 4600.849 kb on - strand, within CA264_19955 at 4600.922 kb on + strand, within CA264_19955 at 4600.999 kb on - strand at 4601.070 kb on - strand at 4601.090 kb on + strand at 4601.091 kb on - strand at 4601.103 kb on + strand at 4601.134 kb on + strand at 4601.145 kb on + strand at 4601.237 kb on + strand, within CA264_19960 at 4601.358 kb on + strand, within CA264_19960 at 4601.359 kb on - strand, within CA264_19960 at 4601.364 kb on + strand, within CA264_19960 at 4601.365 kb on - strand, within CA264_19960 at 4601.522 kb on + strand, within CA264_19960 at 4601.539 kb on + strand, within CA264_19960 at 4601.540 kb on - strand, within CA264_19960 at 4601.574 kb on - strand, within CA264_19960 at 4601.593 kb on + strand at 4601.663 kb on - strand at 4601.669 kb on + strand at 4601.669 kb on + strand at 4601.670 kb on - strand at 4601.670 kb on - strand at 4601.896 kb on + strand, within CA264_19965 at 4601.904 kb on - strand, within CA264_19965 at 4601.904 kb on - strand, within CA264_19965 at 4601.996 kb on - strand, within CA264_19965 at 4601.997 kb on + strand, within CA264_19965 at 4602.042 kb on - strand, within CA264_19965 at 4602.119 kb on - strand, within CA264_19965 at 4602.119 kb on - strand, within CA264_19965 at 4602.129 kb on + strand, within CA264_19965 at 4602.130 kb on - strand, within CA264_19965 at 4602.130 kb on - strand, within CA264_19965 at 4602.132 kb on - strand, within CA264_19965 at 4602.150 kb on - strand, within CA264_19965 at 4602.279 kb on - strand, within CA264_19965 at 4602.322 kb on + strand, within CA264_19965 at 4602.419 kb on + strand, within CA264_19965 at 4602.419 kb on + strand, within CA264_19965 at 4602.545 kb on - strand, within CA264_19965 at 4602.545 kb on - strand, within CA264_19965 at 4602.568 kb on - strand, within CA264_19965 at 4602.568 kb on - strand, within CA264_19965 at 4602.574 kb on + strand, within CA264_19965 at 4602.574 kb on + strand, within CA264_19965 at 4602.584 kb on - strand, within CA264_19965 at 4602.744 kb on + strand at 4602.771 kb on - strand at 4602.771 kb on - strand at 4602.772 kb on + strand at 4602.815 kb on + strand at 4602.830 kb on - strand at 4603.012 kb on + strand, within CA264_19970 at 4603.063 kb on - strand, within CA264_19970 at 4603.235 kb on + strand at 4603.249 kb on + strand at 4603.262 kb on + strand at 4603.279 kb on + strand at 4603.280 kb on - strand at 4603.345 kb on - strand at 4603.382 kb on - strand at 4603.433 kb on + strand at 4603.433 kb on + strand at 4603.486 kb on + strand at 4603.489 kb on - strand at 4603.528 kb on + strand at 4603.538 kb on + strand at 4603.539 kb on - strand at 4603.712 kb on + strand, within CA264_19975 at 4603.713 kb on - strand, within CA264_19975 at 4603.713 kb on - strand, within CA264_19975
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,600,744 + CA264_19955 0.61 +1.6 4,600,816 - CA264_19955 0.69 -0.1 4,600,848 + CA264_19955 0.73 +0.3 4,600,849 - CA264_19955 0.73 -0.5 4,600,922 + CA264_19955 0.82 +1.6 4,600,999 - +0.7 4,601,070 - +0.3 4,601,090 + -0.3 4,601,091 - +1.3 4,601,103 + +0.9 4,601,134 + +0.0 4,601,145 + +0.7 4,601,237 + CA264_19960 0.19 +1.4 4,601,358 + CA264_19960 0.45 -0.2 4,601,359 - CA264_19960 0.45 -0.9 4,601,364 + CA264_19960 0.46 -1.1 4,601,365 - CA264_19960 0.46 +0.1 4,601,522 + CA264_19960 0.79 -2.6 4,601,539 + CA264_19960 0.82 -0.1 4,601,540 - CA264_19960 0.82 +0.8 4,601,574 - CA264_19960 0.90 -0.8 4,601,593 + +0.4 4,601,663 - +0.1 4,601,669 + -1.4 4,601,669 + -0.2 4,601,670 - +0.6 4,601,670 - -0.1 4,601,896 + CA264_19965 0.19 +0.6 4,601,904 - CA264_19965 0.20 -0.2 4,601,904 - CA264_19965 0.20 +1.0 4,601,996 - CA264_19965 0.29 +0.3 4,601,997 + CA264_19965 0.29 -0.1 4,602,042 - CA264_19965 0.33 +0.2 4,602,119 - CA264_19965 0.40 +0.3 4,602,119 - CA264_19965 0.40 -0.9 4,602,129 + CA264_19965 0.41 +0.5 4,602,130 - CA264_19965 0.41 +1.0 4,602,130 - CA264_19965 0.41 +0.9 4,602,132 - CA264_19965 0.41 -0.4 4,602,150 - CA264_19965 0.43 +0.2 4,602,279 - CA264_19965 0.55 -0.1 4,602,322 + CA264_19965 0.59 -0.2 4,602,419 + CA264_19965 0.68 +1.3 4,602,419 + CA264_19965 0.68 -0.2 4,602,545 - CA264_19965 0.79 -1.0 4,602,545 - CA264_19965 0.79 -0.0 4,602,568 - CA264_19965 0.81 -0.4 4,602,568 - CA264_19965 0.81 +0.2 4,602,574 + CA264_19965 0.82 +0.3 4,602,574 + CA264_19965 0.82 +0.4 4,602,584 - CA264_19965 0.83 -0.3 4,602,744 + +0.2 4,602,771 - -0.2 4,602,771 - +0.4 4,602,772 + +0.4 4,602,815 + +0.1 4,602,830 - +0.7 4,603,012 + CA264_19970 0.16 -0.5 4,603,063 - CA264_19970 0.36 +1.4 4,603,235 + -0.6 4,603,249 + -0.4 4,603,262 + +0.3 4,603,279 + -1.1 4,603,280 - -0.5 4,603,345 - +1.1 4,603,382 - -0.5 4,603,433 + -0.6 4,603,433 + -0.3 4,603,486 + -0.4 4,603,489 - +0.6 4,603,528 + -0.3 4,603,538 + -0.2 4,603,539 - +1.0 4,603,712 + CA264_19975 0.12 +0.7 4,603,713 - CA264_19975 0.12 -1.0 4,603,713 - CA264_19975 0.12 +0.3
Or see this region's nucleotide sequence