Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19725 and CA264_19730 are separated by 110 nucleotides CA264_19730 and CA264_19735 are separated by 164 nucleotides CA264_19735 and CA264_19740 overlap by 8 nucleotides CA264_19740 and CA264_19745 are separated by 20 nucleotides
CA264_19725: CA264_19725 - peptidylprolyl isomerase, at 4,552,190 to 4,553,545
_19725
CA264_19730: CA264_19730 - peptidylprolyl isomerase, at 4,553,656 to 4,555,956
_19730
CA264_19735: CA264_19735 - ATP-binding protein, at 4,556,121 to 4,556,531
_19735
CA264_19740: CA264_19740 - anti-sigma F factor antagonist, at 4,556,524 to 4,556,862
_19740
CA264_19745: CA264_19745 - serine/threonine protein phosphatase, at 4,556,883 to 4,559,048
_19745
Position (kb)
4553
4554
4555
4556 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4553.498 kb on + strand at 4553.571 kb on + strand at 4553.576 kb on - strand at 4553.616 kb on - strand at 4553.618 kb on + strand at 4553.666 kb on - strand at 4553.678 kb on - strand at 4553.858 kb on + strand at 4553.859 kb on - strand at 4553.879 kb on - strand at 4553.991 kb on - strand, within CA264_19730 at 4554.069 kb on - strand, within CA264_19730 at 4554.288 kb on + strand, within CA264_19730 at 4554.288 kb on + strand, within CA264_19730 at 4554.288 kb on + strand, within CA264_19730 at 4554.309 kb on + strand, within CA264_19730 at 4554.408 kb on + strand, within CA264_19730 at 4554.408 kb on + strand, within CA264_19730 at 4554.408 kb on + strand, within CA264_19730 at 4554.409 kb on - strand, within CA264_19730 at 4554.409 kb on - strand, within CA264_19730 at 4554.409 kb on - strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.411 kb on - strand, within CA264_19730 at 4554.539 kb on + strand, within CA264_19730 at 4554.546 kb on + strand, within CA264_19730 at 4554.547 kb on - strand, within CA264_19730 at 4554.548 kb on + strand, within CA264_19730 at 4554.548 kb on + strand, within CA264_19730 at 4554.548 kb on + strand, within CA264_19730 at 4554.549 kb on - strand, within CA264_19730 at 4554.575 kb on + strand, within CA264_19730 at 4554.667 kb on + strand, within CA264_19730 at 4554.667 kb on + strand, within CA264_19730 at 4554.668 kb on - strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.677 kb on + strand, within CA264_19730 at 4554.678 kb on - strand, within CA264_19730 at 4554.678 kb on - strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.696 kb on - strand, within CA264_19730 at 4554.696 kb on - strand, within CA264_19730 at 4554.752 kb on + strand, within CA264_19730 at 4554.825 kb on + strand, within CA264_19730 at 4554.961 kb on + strand, within CA264_19730 at 4554.962 kb on - strand, within CA264_19730 at 4554.962 kb on - strand, within CA264_19730 at 4554.962 kb on - strand, within CA264_19730 at 4555.164 kb on - strand, within CA264_19730 at 4555.367 kb on + strand, within CA264_19730 at 4555.593 kb on - strand, within CA264_19730 at 4555.637 kb on + strand, within CA264_19730 at 4555.638 kb on - strand, within CA264_19730 at 4555.745 kb on + strand at 4555.746 kb on - strand at 4555.746 kb on - strand at 4555.758 kb on - strand at 4555.781 kb on + strand at 4555.781 kb on + strand at 4555.782 kb on - strand at 4555.782 kb on - strand at 4555.814 kb on + strand at 4555.814 kb on + strand at 4555.815 kb on - strand at 4555.836 kb on + strand at 4555.837 kb on - strand at 4555.837 kb on - strand at 4555.837 kb on - strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.843 kb on - strand at 4555.861 kb on - strand at 4555.933 kb on + strand at 4555.933 kb on + strand at 4555.939 kb on + strand at 4555.940 kb on - strand at 4555.940 kb on - strand at 4555.956 kb on + strand at 4556.006 kb on - strand at 4556.035 kb on + strand at 4556.036 kb on - strand at 4556.036 kb on - strand at 4556.109 kb on + strand at 4556.110 kb on - strand at 4556.110 kb on - strand at 4556.122 kb on + strand at 4556.122 kb on + strand at 4556.123 kb on - strand at 4556.525 kb on + strand at 4556.679 kb on + strand, within CA264_19740 at 4556.709 kb on - strand, within CA264_19740 at 4556.744 kb on + strand, within CA264_19740 at 4556.868 kb on + strand at 4556.869 kb on - strand at 4556.938 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,553,498 + -0.5 4,553,571 + +0.4 4,553,576 - -0.1 4,553,616 - +0.7 4,553,618 + -0.2 4,553,666 - +0.4 4,553,678 - -0.4 4,553,858 + +0.8 4,553,859 - -0.6 4,553,879 - -0.2 4,553,991 - CA264_19730 0.15 +1.4 4,554,069 - CA264_19730 0.18 +0.2 4,554,288 + CA264_19730 0.27 +1.0 4,554,288 + CA264_19730 0.27 -0.1 4,554,288 + CA264_19730 0.27 +1.7 4,554,309 + CA264_19730 0.28 +0.7 4,554,408 + CA264_19730 0.33 +0.1 4,554,408 + CA264_19730 0.33 +0.2 4,554,408 + CA264_19730 0.33 +1.0 4,554,409 - CA264_19730 0.33 +0.4 4,554,409 - CA264_19730 0.33 +0.2 4,554,409 - CA264_19730 0.33 +0.1 4,554,410 + CA264_19730 0.33 +0.5 4,554,410 + CA264_19730 0.33 -0.9 4,554,410 + CA264_19730 0.33 -0.3 4,554,410 + CA264_19730 0.33 -0.1 4,554,410 + CA264_19730 0.33 +2.0 4,554,411 - CA264_19730 0.33 +0.3 4,554,539 + CA264_19730 0.38 -0.3 4,554,546 + CA264_19730 0.39 -0.1 4,554,547 - CA264_19730 0.39 -0.0 4,554,548 + CA264_19730 0.39 +0.3 4,554,548 + CA264_19730 0.39 +0.0 4,554,548 + CA264_19730 0.39 +0.1 4,554,549 - CA264_19730 0.39 +0.3 4,554,575 + CA264_19730 0.40 +0.1 4,554,667 + CA264_19730 0.44 +0.1 4,554,667 + CA264_19730 0.44 +0.1 4,554,668 - CA264_19730 0.44 +0.6 4,554,671 + CA264_19730 0.44 -0.5 4,554,671 + CA264_19730 0.44 +0.4 4,554,671 + CA264_19730 0.44 +0.3 4,554,671 + CA264_19730 0.44 +0.1 4,554,671 + CA264_19730 0.44 +1.1 4,554,672 - CA264_19730 0.44 -0.4 4,554,672 - CA264_19730 0.44 +0.2 4,554,672 - CA264_19730 0.44 +0.2 4,554,672 - CA264_19730 0.44 +0.0 4,554,672 - CA264_19730 0.44 +0.2 4,554,672 - CA264_19730 0.44 +0.3 4,554,672 - CA264_19730 0.44 +0.7 4,554,672 - CA264_19730 0.44 -0.5 4,554,677 + CA264_19730 0.44 -0.3 4,554,678 - CA264_19730 0.44 -2.1 4,554,678 - CA264_19730 0.44 +0.3 4,554,695 + CA264_19730 0.45 +0.6 4,554,695 + CA264_19730 0.45 +0.3 4,554,695 + CA264_19730 0.45 +1.8 4,554,695 + CA264_19730 0.45 -0.2 4,554,696 - CA264_19730 0.45 +0.1 4,554,696 - CA264_19730 0.45 +0.3 4,554,752 + CA264_19730 0.48 +0.3 4,554,825 + CA264_19730 0.51 +0.1 4,554,961 + CA264_19730 0.57 -0.0 4,554,962 - CA264_19730 0.57 +0.5 4,554,962 - CA264_19730 0.57 +0.2 4,554,962 - CA264_19730 0.57 -0.1 4,555,164 - CA264_19730 0.66 -0.5 4,555,367 + CA264_19730 0.74 +0.8 4,555,593 - CA264_19730 0.84 +0.6 4,555,637 + CA264_19730 0.86 +0.6 4,555,638 - CA264_19730 0.86 +0.1 4,555,745 + -0.1 4,555,746 - +0.1 4,555,746 - +0.6 4,555,758 - -0.0 4,555,781 + +0.5 4,555,781 + -0.0 4,555,782 - +0.5 4,555,782 - -0.5 4,555,814 + +0.1 4,555,814 + +0.3 4,555,815 - +0.4 4,555,836 + +0.9 4,555,837 - +0.4 4,555,837 - -0.3 4,555,837 - -0.2 4,555,842 + +0.7 4,555,842 + -0.4 4,555,842 + +0.6 4,555,842 + +0.2 4,555,843 - +0.4 4,555,861 - -0.4 4,555,933 + -1.2 4,555,933 + +0.3 4,555,939 + -0.6 4,555,940 - -0.2 4,555,940 - +0.4 4,555,956 + -0.1 4,556,006 - -0.2 4,556,035 + -0.6 4,556,036 - +0.8 4,556,036 - +1.0 4,556,109 + -0.0 4,556,110 - -0.3 4,556,110 - +0.6 4,556,122 + +0.1 4,556,122 + -0.9 4,556,123 - +0.2 4,556,525 + -0.0 4,556,679 + CA264_19740 0.46 -0.0 4,556,709 - CA264_19740 0.55 -0.4 4,556,744 + CA264_19740 0.65 -0.3 4,556,868 + +1.1 4,556,869 - -0.5 4,556,938 + -0.3
Or see this region's nucleotide sequence