Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19635 and CA264_19640 are separated by 62 nucleotides CA264_19640 and CA264_19645 are separated by 78 nucleotides CA264_19645 and CA264_19650 are separated by 205 nucleotides
CA264_19635: CA264_19635 - hypothetical protein, at 4,535,331 to 4,536,194
_19635
CA264_19640: CA264_19640 - TraB/GumN family protein, at 4,536,257 to 4,536,982
_19640
CA264_19645: CA264_19645 - IS256 family transposase, at 4,537,061 to 4,538,284
_19645
CA264_19650: CA264_19650 - translation elongation factor Ts, at 4,538,490 to 4,539,323
_19650
Position (kb)
4537
4538
4539 Strain fitness (log2 ratio)
-2
-1
0
1 at 4536.202 kb on + strand at 4536.213 kb on - strand at 4536.213 kb on - strand at 4536.247 kb on - strand at 4536.389 kb on - strand, within CA264_19640 at 4536.389 kb on - strand, within CA264_19640 at 4536.420 kb on + strand, within CA264_19640 at 4536.420 kb on + strand, within CA264_19640 at 4536.421 kb on - strand, within CA264_19640 at 4536.423 kb on + strand, within CA264_19640 at 4536.423 kb on + strand, within CA264_19640 at 4536.524 kb on - strand, within CA264_19640 at 4536.524 kb on - strand, within CA264_19640 at 4536.541 kb on - strand, within CA264_19640 at 4536.623 kb on - strand, within CA264_19640 at 4536.624 kb on + strand, within CA264_19640 at 4536.625 kb on - strand, within CA264_19640 at 4536.658 kb on - strand, within CA264_19640 at 4536.697 kb on + strand, within CA264_19640 at 4536.698 kb on - strand, within CA264_19640 at 4536.701 kb on - strand, within CA264_19640 at 4536.717 kb on + strand, within CA264_19640 at 4536.736 kb on - strand, within CA264_19640 at 4536.747 kb on - strand, within CA264_19640 at 4536.767 kb on + strand, within CA264_19640 at 4536.767 kb on + strand, within CA264_19640 at 4536.787 kb on - strand, within CA264_19640 at 4536.791 kb on - strand, within CA264_19640 at 4536.819 kb on + strand, within CA264_19640 at 4536.822 kb on + strand, within CA264_19640 at 4536.822 kb on + strand, within CA264_19640 at 4536.849 kb on + strand, within CA264_19640 at 4536.931 kb on - strand at 4536.956 kb on + strand at 4536.959 kb on - strand at 4536.959 kb on - strand at 4536.978 kb on + strand at 4536.980 kb on + strand at 4537.033 kb on + strand at 4537.037 kb on - strand at 4537.039 kb on + strand at 4537.040 kb on - strand at 4537.403 kb on + strand, within CA264_19645 at 4537.455 kb on - strand, within CA264_19645 at 4537.455 kb on - strand, within CA264_19645 at 4537.580 kb on + strand, within CA264_19645 at 4537.674 kb on - strand, within CA264_19645 at 4537.674 kb on - strand, within CA264_19645 at 4537.747 kb on + strand, within CA264_19645 at 4537.748 kb on - strand, within CA264_19645 at 4537.748 kb on - strand, within CA264_19645 at 4537.822 kb on - strand, within CA264_19645 at 4537.863 kb on - strand, within CA264_19645 at 4537.863 kb on - strand, within CA264_19645 at 4538.039 kb on - strand, within CA264_19645 at 4538.039 kb on - strand, within CA264_19645 at 4538.120 kb on - strand, within CA264_19645 at 4538.168 kb on + strand at 4538.332 kb on + strand at 4538.350 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,536,202 + -0.6 4,536,213 - -0.2 4,536,213 - +0.2 4,536,247 - -0.5 4,536,389 - CA264_19640 0.18 +0.2 4,536,389 - CA264_19640 0.18 -0.7 4,536,420 + CA264_19640 0.22 -0.2 4,536,420 + CA264_19640 0.22 +0.2 4,536,421 - CA264_19640 0.23 -0.6 4,536,423 + CA264_19640 0.23 -0.2 4,536,423 + CA264_19640 0.23 -0.9 4,536,524 - CA264_19640 0.37 +0.5 4,536,524 - CA264_19640 0.37 +0.0 4,536,541 - CA264_19640 0.39 -0.4 4,536,623 - CA264_19640 0.50 +0.8 4,536,624 + CA264_19640 0.51 -1.8 4,536,625 - CA264_19640 0.51 +1.0 4,536,658 - CA264_19640 0.55 -0.5 4,536,697 + CA264_19640 0.61 -0.4 4,536,698 - CA264_19640 0.61 +0.2 4,536,701 - CA264_19640 0.61 -0.2 4,536,717 + CA264_19640 0.63 -0.1 4,536,736 - CA264_19640 0.66 -0.4 4,536,747 - CA264_19640 0.67 -0.7 4,536,767 + CA264_19640 0.70 +0.1 4,536,767 + CA264_19640 0.70 +0.2 4,536,787 - CA264_19640 0.73 -0.4 4,536,791 - CA264_19640 0.74 +0.4 4,536,819 + CA264_19640 0.77 +0.4 4,536,822 + CA264_19640 0.78 -0.3 4,536,822 + CA264_19640 0.78 +0.2 4,536,849 + CA264_19640 0.82 -0.5 4,536,931 - -0.2 4,536,956 + -0.5 4,536,959 - -0.4 4,536,959 - +0.1 4,536,978 + -0.4 4,536,980 + +0.0 4,537,033 + +0.3 4,537,037 - -0.5 4,537,039 + -1.0 4,537,040 - +0.2 4,537,403 + CA264_19645 0.28 -0.3 4,537,455 - CA264_19645 0.32 -0.8 4,537,455 - CA264_19645 0.32 -1.1 4,537,580 + CA264_19645 0.42 -0.2 4,537,674 - CA264_19645 0.50 -0.7 4,537,674 - CA264_19645 0.50 -0.6 4,537,747 + CA264_19645 0.56 -2.1 4,537,748 - CA264_19645 0.56 +0.3 4,537,748 - CA264_19645 0.56 +0.3 4,537,822 - CA264_19645 0.62 -0.7 4,537,863 - CA264_19645 0.66 -0.0 4,537,863 - CA264_19645 0.66 -0.8 4,538,039 - CA264_19645 0.80 +0.4 4,538,039 - CA264_19645 0.80 +0.0 4,538,120 - CA264_19645 0.87 +0.2 4,538,168 + -0.2 4,538,332 + -0.2 4,538,350 - -0.6
Or see this region's nucleotide sequence