Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18090 and CA264_18095 are separated by 88 nucleotides CA264_18095 and CA264_18100 are separated by 60 nucleotides
CA264_18090: CA264_18090 - DUF305 domain-containing protein, at 4,207,174 to 4,207,755
_18090
CA264_18095: CA264_18095 - hypothetical protein, at 4,207,844 to 4,208,419
_18095
CA264_18100: CA264_18100 - ABC-ATPase UvrA, at 4,208,480 to 4,211,395
_18100
Position (kb)
4207
4208
4209 Strain fitness (log2 ratio)
-2
-1
0
1 at 4206.861 kb on + strand at 4206.861 kb on + strand at 4206.883 kb on + strand at 4206.899 kb on - strand at 4206.899 kb on - strand at 4206.902 kb on + strand at 4206.903 kb on - strand at 4206.942 kb on + strand at 4206.943 kb on - strand at 4206.943 kb on - strand at 4206.980 kb on + strand at 4207.002 kb on - strand at 4207.127 kb on - strand at 4207.127 kb on - strand at 4207.162 kb on + strand at 4207.166 kb on - strand at 4207.167 kb on + strand at 4207.168 kb on - strand at 4207.302 kb on + strand, within CA264_18090 at 4207.303 kb on - strand, within CA264_18090 at 4207.303 kb on - strand, within CA264_18090 at 4207.320 kb on + strand, within CA264_18090 at 4207.321 kb on - strand, within CA264_18090 at 4207.415 kb on + strand, within CA264_18090 at 4207.415 kb on + strand, within CA264_18090 at 4207.582 kb on + strand, within CA264_18090 at 4207.583 kb on - strand, within CA264_18090 at 4207.649 kb on + strand, within CA264_18090 at 4207.650 kb on - strand, within CA264_18090 at 4207.650 kb on - strand, within CA264_18090 at 4207.753 kb on + strand at 4207.754 kb on - strand at 4207.754 kb on - strand at 4207.775 kb on + strand at 4207.776 kb on - strand at 4207.779 kb on + strand at 4207.784 kb on + strand at 4207.795 kb on + strand at 4207.796 kb on - strand at 4207.818 kb on + strand at 4207.881 kb on + strand at 4207.948 kb on - strand, within CA264_18095 at 4208.032 kb on - strand, within CA264_18095 at 4208.032 kb on - strand, within CA264_18095 at 4208.230 kb on + strand, within CA264_18095 at 4208.230 kb on + strand, within CA264_18095 at 4208.272 kb on - strand, within CA264_18095 at 4208.339 kb on + strand, within CA264_18095 at 4208.340 kb on - strand, within CA264_18095 at 4208.414 kb on - strand at 4208.511 kb on + strand at 4208.635 kb on + strand at 4208.647 kb on - strand at 4208.687 kb on - strand at 4208.690 kb on + strand at 4208.691 kb on - strand at 4208.711 kb on - strand at 4208.721 kb on - strand at 4208.784 kb on + strand, within CA264_18100 at 4208.785 kb on - strand, within CA264_18100 at 4208.864 kb on - strand, within CA264_18100 at 4209.092 kb on + strand, within CA264_18100 at 4209.287 kb on + strand, within CA264_18100 at 4209.288 kb on - strand, within CA264_18100 at 4209.288 kb on - strand, within CA264_18100 at 4209.290 kb on + strand, within CA264_18100 at 4209.291 kb on - strand, within CA264_18100 at 4209.379 kb on - strand, within CA264_18100
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,206,861 + +0.4 4,206,861 + -0.3 4,206,883 + -0.0 4,206,899 - -0.9 4,206,899 - -0.0 4,206,902 + -0.1 4,206,903 - -0.2 4,206,942 + -0.5 4,206,943 - -1.0 4,206,943 - -0.8 4,206,980 + -0.3 4,207,002 - -0.6 4,207,127 - -0.4 4,207,127 - -0.1 4,207,162 + -0.3 4,207,166 - -0.0 4,207,167 + -0.8 4,207,168 - -0.8 4,207,302 + CA264_18090 0.22 +0.1 4,207,303 - CA264_18090 0.22 -0.5 4,207,303 - CA264_18090 0.22 -0.9 4,207,320 + CA264_18090 0.25 +0.5 4,207,321 - CA264_18090 0.25 -1.3 4,207,415 + CA264_18090 0.41 -1.8 4,207,415 + CA264_18090 0.41 +0.1 4,207,582 + CA264_18090 0.70 -0.9 4,207,583 - CA264_18090 0.70 -0.7 4,207,649 + CA264_18090 0.82 -0.6 4,207,650 - CA264_18090 0.82 -0.1 4,207,650 - CA264_18090 0.82 +0.7 4,207,753 + -0.5 4,207,754 - -0.7 4,207,754 - +0.7 4,207,775 + +0.5 4,207,776 - -0.0 4,207,779 + +0.6 4,207,784 + -0.7 4,207,795 + -0.5 4,207,796 - -1.5 4,207,818 + +0.2 4,207,881 + +1.1 4,207,948 - CA264_18095 0.18 -0.2 4,208,032 - CA264_18095 0.33 +0.1 4,208,032 - CA264_18095 0.33 +0.3 4,208,230 + CA264_18095 0.67 -0.1 4,208,230 + CA264_18095 0.67 +0.8 4,208,272 - CA264_18095 0.74 -0.1 4,208,339 + CA264_18095 0.86 +0.5 4,208,340 - CA264_18095 0.86 -0.5 4,208,414 - +0.7 4,208,511 + -0.4 4,208,635 + -0.2 4,208,647 - -0.6 4,208,687 - +0.8 4,208,690 + -0.6 4,208,691 - -0.6 4,208,711 - -0.9 4,208,721 - -0.2 4,208,784 + CA264_18100 0.10 -1.7 4,208,785 - CA264_18100 0.10 -0.8 4,208,864 - CA264_18100 0.13 -0.8 4,209,092 + CA264_18100 0.21 -0.9 4,209,287 + CA264_18100 0.28 -0.3 4,209,288 - CA264_18100 0.28 -2.1 4,209,288 - CA264_18100 0.28 -1.1 4,209,290 + CA264_18100 0.28 -0.4 4,209,291 - CA264_18100 0.28 -1.1 4,209,379 - CA264_18100 0.31 -0.1
Or see this region's nucleotide sequence