Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18075 and CA264_18080 are separated by 146 nucleotides CA264_18080 and CA264_18085 are separated by 149 nucleotides CA264_18085 and CA264_18090 are separated by 385 nucleotides
CA264_18075: CA264_18075 - 3-dehydro-L-gulonate 2-dehydrogenase, at 4,204,115 to 4,205,119
_18075
CA264_18080: CA264_18080 - hypothetical protein, at 4,205,266 to 4,205,856
_18080
CA264_18085: CA264_18085 - 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase, at 4,206,006 to 4,206,788
_18085
CA264_18090: CA264_18090 - DUF305 domain-containing protein, at 4,207,174 to 4,207,755
_18090
Position (kb)
4206
4207 Strain fitness (log2 ratio)
-2
-1
0
1 at 4205.139 kb on + strand at 4205.159 kb on + strand at 4205.165 kb on + strand at 4205.166 kb on - strand at 4205.166 kb on - strand at 4205.184 kb on - strand at 4205.202 kb on - strand at 4205.214 kb on - strand at 4205.216 kb on - strand at 4205.294 kb on - strand at 4205.307 kb on + strand at 4205.307 kb on + strand at 4205.314 kb on + strand at 4205.317 kb on + strand at 4205.318 kb on - strand at 4205.318 kb on - strand at 4205.318 kb on - strand at 4205.397 kb on + strand, within CA264_18080 at 4205.397 kb on + strand, within CA264_18080 at 4205.397 kb on + strand, within CA264_18080 at 4205.398 kb on - strand, within CA264_18080 at 4205.421 kb on - strand, within CA264_18080 at 4205.421 kb on - strand, within CA264_18080 at 4205.627 kb on + strand, within CA264_18080 at 4205.627 kb on + strand, within CA264_18080 at 4205.628 kb on - strand, within CA264_18080 at 4205.628 kb on - strand, within CA264_18080 at 4205.794 kb on + strand, within CA264_18080 at 4205.851 kb on + strand at 4205.855 kb on - strand at 4205.875 kb on - strand at 4205.982 kb on + strand at 4206.002 kb on - strand at 4206.002 kb on - strand at 4206.012 kb on + strand at 4206.025 kb on + strand at 4206.105 kb on + strand, within CA264_18085 at 4206.134 kb on - strand, within CA264_18085 at 4206.134 kb on - strand, within CA264_18085 at 4206.276 kb on - strand, within CA264_18085 at 4206.316 kb on + strand, within CA264_18085 at 4206.393 kb on - strand, within CA264_18085 at 4206.410 kb on - strand, within CA264_18085 at 4206.416 kb on - strand, within CA264_18085 at 4206.509 kb on - strand, within CA264_18085 at 4206.509 kb on - strand, within CA264_18085 at 4206.687 kb on + strand, within CA264_18085 at 4206.815 kb on + strand at 4206.861 kb on + strand at 4206.861 kb on + strand at 4206.883 kb on + strand at 4206.899 kb on - strand at 4206.899 kb on - strand at 4206.902 kb on + strand at 4206.903 kb on - strand at 4206.942 kb on + strand at 4206.943 kb on - strand at 4206.943 kb on - strand at 4206.980 kb on + strand at 4207.002 kb on - strand at 4207.127 kb on - strand at 4207.127 kb on - strand at 4207.162 kb on + strand at 4207.166 kb on - strand at 4207.167 kb on + strand at 4207.168 kb on - strand at 4207.302 kb on + strand, within CA264_18090 at 4207.303 kb on - strand, within CA264_18090 at 4207.303 kb on - strand, within CA264_18090 at 4207.320 kb on + strand, within CA264_18090 at 4207.321 kb on - strand, within CA264_18090 at 4207.415 kb on + strand, within CA264_18090 at 4207.415 kb on + strand, within CA264_18090 at 4207.582 kb on + strand, within CA264_18090 at 4207.583 kb on - strand, within CA264_18090 at 4207.649 kb on + strand, within CA264_18090 at 4207.650 kb on - strand, within CA264_18090 at 4207.650 kb on - strand, within CA264_18090 at 4207.753 kb on + strand at 4207.754 kb on - strand at 4207.754 kb on - strand at 4207.775 kb on + strand at 4207.776 kb on - strand at 4207.779 kb on + strand at 4207.784 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,205,139 + +0.5 4,205,159 + -0.3 4,205,165 + +1.0 4,205,166 - -0.7 4,205,166 - +0.3 4,205,184 - -0.1 4,205,202 - -0.0 4,205,214 - -0.8 4,205,216 - -0.8 4,205,294 - +0.7 4,205,307 + -0.4 4,205,307 + +0.4 4,205,314 + -0.1 4,205,317 + -0.0 4,205,318 - +0.3 4,205,318 - +0.1 4,205,318 - +0.7 4,205,397 + CA264_18080 0.22 +0.3 4,205,397 + CA264_18080 0.22 -0.0 4,205,397 + CA264_18080 0.22 +0.1 4,205,398 - CA264_18080 0.22 +1.2 4,205,421 - CA264_18080 0.26 +0.0 4,205,421 - CA264_18080 0.26 -0.7 4,205,627 + CA264_18080 0.61 -0.4 4,205,627 + CA264_18080 0.61 -0.3 4,205,628 - CA264_18080 0.61 +0.5 4,205,628 - CA264_18080 0.61 +0.7 4,205,794 + CA264_18080 0.89 +1.7 4,205,851 + -0.7 4,205,855 - -0.5 4,205,875 - -0.2 4,205,982 + +0.4 4,206,002 - -0.2 4,206,002 - -1.0 4,206,012 + -0.0 4,206,025 + -0.9 4,206,105 + CA264_18085 0.13 -1.0 4,206,134 - CA264_18085 0.16 +0.7 4,206,134 - CA264_18085 0.16 +0.3 4,206,276 - CA264_18085 0.34 +0.4 4,206,316 + CA264_18085 0.40 -0.4 4,206,393 - CA264_18085 0.49 +0.2 4,206,410 - CA264_18085 0.52 +0.0 4,206,416 - CA264_18085 0.52 +0.1 4,206,509 - CA264_18085 0.64 -0.5 4,206,509 - CA264_18085 0.64 -0.1 4,206,687 + CA264_18085 0.87 +0.8 4,206,815 + +0.2 4,206,861 + +0.4 4,206,861 + -0.3 4,206,883 + -0.0 4,206,899 - -0.9 4,206,899 - -0.0 4,206,902 + -0.1 4,206,903 - -0.2 4,206,942 + -0.5 4,206,943 - -1.0 4,206,943 - -0.8 4,206,980 + -0.3 4,207,002 - -0.6 4,207,127 - -0.4 4,207,127 - -0.1 4,207,162 + -0.3 4,207,166 - -0.0 4,207,167 + -0.8 4,207,168 - -0.8 4,207,302 + CA264_18090 0.22 +0.1 4,207,303 - CA264_18090 0.22 -0.5 4,207,303 - CA264_18090 0.22 -0.9 4,207,320 + CA264_18090 0.25 +0.5 4,207,321 - CA264_18090 0.25 -1.3 4,207,415 + CA264_18090 0.41 -1.8 4,207,415 + CA264_18090 0.41 +0.1 4,207,582 + CA264_18090 0.70 -0.9 4,207,583 - CA264_18090 0.70 -0.7 4,207,649 + CA264_18090 0.82 -0.6 4,207,650 - CA264_18090 0.82 -0.1 4,207,650 - CA264_18090 0.82 +0.7 4,207,753 + -0.5 4,207,754 - -0.7 4,207,754 - +0.7 4,207,775 + +0.5 4,207,776 - -0.0 4,207,779 + +0.6 4,207,784 + -0.7
Or see this region's nucleotide sequence