Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18065 and CA264_18070 are separated by 314 nucleotides CA264_18070 and CA264_18075 are separated by 688 nucleotides
CA264_18065: CA264_18065 - asparagine--tRNA ligase, at 4,200,230 to 4,201,669
_18065
CA264_18070: CA264_18070 - RNA polymerase sigma-54 factor, at 4,201,984 to 4,203,426
_18070
CA264_18075: CA264_18075 - 3-dehydro-L-gulonate 2-dehydrogenase, at 4,204,115 to 4,205,119
_18075
Position (kb) 4201
4202
4203
4204 Strain fitness (log2 ratio) -1
0
1
2 at 4201.671 kb on + strand at 4201.673 kb on + strand at 4201.674 kb on - strand at 4201.674 kb on - strand at 4201.699 kb on + strand at 4201.700 kb on - strand at 4201.711 kb on + strand at 4201.725 kb on + strand at 4201.734 kb on - strand at 4201.901 kb on - strand at 4201.933 kb on + strand at 4203.425 kb on - strand at 4203.456 kb on - strand at 4203.456 kb on - strand at 4203.547 kb on - strand at 4203.547 kb on - strand at 4203.553 kb on - strand at 4203.559 kb on - strand at 4203.564 kb on + strand at 4203.564 kb on + strand at 4203.602 kb on + strand at 4203.602 kb on + strand at 4203.602 kb on + strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.646 kb on + strand at 4203.655 kb on + strand at 4203.655 kb on + strand at 4203.655 kb on + strand at 4203.656 kb on - strand at 4203.679 kb on - strand at 4203.727 kb on + strand at 4203.728 kb on - strand at 4203.749 kb on + strand at 4203.749 kb on + strand at 4203.750 kb on - strand at 4203.751 kb on + strand at 4203.809 kb on + strand at 4203.858 kb on + strand at 4203.859 kb on - strand at 4203.989 kb on + strand at 4203.990 kb on - strand at 4204.033 kb on + strand at 4204.034 kb on - strand at 4204.078 kb on + strand at 4204.103 kb on - strand at 4204.103 kb on - strand at 4204.155 kb on + strand at 4204.156 kb on - strand at 4204.195 kb on + strand at 4204.312 kb on + strand, within CA264_18075 at 4204.312 kb on + strand, within CA264_18075 at 4204.312 kb on + strand, within CA264_18075 at 4204.313 kb on - strand, within CA264_18075 at 4204.314 kb on + strand, within CA264_18075 at 4204.341 kb on + strand, within CA264_18075 at 4204.357 kb on - strand, within CA264_18075 at 4204.394 kb on + strand, within CA264_18075 at 4204.394 kb on + strand, within CA264_18075 at 4204.395 kb on - strand, within CA264_18075
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,201,671 + +0.2 4,201,673 + -1.5 4,201,674 - -0.2 4,201,674 - -0.5 4,201,699 + -0.1 4,201,700 - +0.2 4,201,711 + -0.1 4,201,725 + -0.4 4,201,734 - +0.2 4,201,901 - +0.1 4,201,933 + +1.1 4,203,425 - +0.1 4,203,456 - -0.6 4,203,456 - +0.5 4,203,547 - -0.0 4,203,547 - -0.6 4,203,553 - +0.7 4,203,559 - +0.3 4,203,564 + -1.1 4,203,564 + -0.2 4,203,602 + -0.3 4,203,602 + +0.1 4,203,602 + +0.2 4,203,603 - -0.3 4,203,603 - -0.5 4,203,603 - +0.5 4,203,603 - -0.8 4,203,603 - -0.1 4,203,646 + -0.2 4,203,655 + +1.3 4,203,655 + -0.3 4,203,655 + +0.3 4,203,656 - -0.1 4,203,679 - +0.1 4,203,727 + +2.7 4,203,728 - +0.0 4,203,749 + +0.7 4,203,749 + -0.1 4,203,750 - +0.3 4,203,751 + -0.1 4,203,809 + -1.1 4,203,858 + +1.0 4,203,859 - -0.6 4,203,989 + +0.1 4,203,990 - +0.9 4,204,033 + +0.9 4,204,034 - +0.1 4,204,078 + -0.3 4,204,103 - +0.1 4,204,103 - -0.8 4,204,155 + +0.2 4,204,156 - +0.2 4,204,195 + -0.9 4,204,312 + CA264_18075 0.20 +0.7 4,204,312 + CA264_18075 0.20 -0.7 4,204,312 + CA264_18075 0.20 -0.1 4,204,313 - CA264_18075 0.20 -0.6 4,204,314 + CA264_18075 0.20 +0.1 4,204,341 + CA264_18075 0.22 -0.3 4,204,357 - CA264_18075 0.24 +0.0 4,204,394 + CA264_18075 0.28 -0.4 4,204,394 + CA264_18075 0.28 -0.2 4,204,395 - CA264_18075 0.28 +0.3
Or see this region's nucleotide sequence