Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16030 and CA264_16035 are separated by 735 nucleotides CA264_16035 and CA264_16040 are separated by 22 nucleotides CA264_16040 and CA264_16045 are separated by 10 nucleotides
CA264_16030: CA264_16030 - hypothetical protein, at 3,734,243 to 3,734,569
_16030
CA264_16035: CA264_16035 - hypothetical protein, at 3,735,305 to 3,735,736
_16035
CA264_16040: CA264_16040 - hypothetical protein, at 3,735,759 to 3,736,166
_16040
CA264_16045: CA264_16045 - hypothetical protein, at 3,736,177 to 3,737,610
_16045
Position (kb)
3735
3736 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3734.315 kb on + strand, within CA264_16030 at 3734.316 kb on - strand, within CA264_16030 at 3734.316 kb on - strand, within CA264_16030 at 3734.316 kb on - strand, within CA264_16030 at 3734.320 kb on - strand, within CA264_16030 at 3734.320 kb on - strand, within CA264_16030 at 3734.320 kb on - strand, within CA264_16030 at 3734.320 kb on - strand, within CA264_16030 at 3734.386 kb on + strand, within CA264_16030 at 3734.387 kb on - strand, within CA264_16030 at 3734.452 kb on + strand, within CA264_16030 at 3734.452 kb on + strand, within CA264_16030 at 3734.452 kb on + strand, within CA264_16030 at 3734.452 kb on + strand, within CA264_16030 at 3734.452 kb on + strand, within CA264_16030 at 3734.453 kb on - strand, within CA264_16030 at 3734.453 kb on - strand, within CA264_16030 at 3734.453 kb on - strand, within CA264_16030 at 3734.453 kb on - strand, within CA264_16030 at 3734.453 kb on - strand, within CA264_16030 at 3734.477 kb on + strand, within CA264_16030 at 3734.477 kb on + strand, within CA264_16030 at 3734.477 kb on + strand, within CA264_16030 at 3734.483 kb on - strand, within CA264_16030 at 3734.489 kb on + strand, within CA264_16030 at 3734.489 kb on + strand, within CA264_16030 at 3734.509 kb on + strand, within CA264_16030 at 3734.510 kb on - strand, within CA264_16030 at 3734.520 kb on + strand, within CA264_16030 at 3734.520 kb on + strand, within CA264_16030 at 3734.521 kb on - strand, within CA264_16030 at 3734.521 kb on - strand, within CA264_16030 at 3734.598 kb on + strand at 3734.598 kb on + strand at 3734.630 kb on - strand at 3734.630 kb on - strand at 3734.641 kb on - strand at 3734.844 kb on + strand at 3735.037 kb on + strand at 3735.047 kb on + strand at 3735.047 kb on + strand at 3735.050 kb on + strand at 3735.068 kb on + strand at 3735.112 kb on + strand at 3735.182 kb on + strand at 3735.185 kb on + strand at 3735.281 kb on + strand at 3735.281 kb on + strand at 3735.283 kb on + strand at 3735.312 kb on + strand at 3735.312 kb on + strand at 3735.379 kb on + strand, within CA264_16035 at 3735.380 kb on - strand, within CA264_16035 at 3735.380 kb on - strand, within CA264_16035 at 3735.383 kb on + strand, within CA264_16035 at 3735.421 kb on - strand, within CA264_16035 at 3735.429 kb on + strand, within CA264_16035 at 3735.429 kb on + strand, within CA264_16035 at 3735.436 kb on + strand, within CA264_16035 at 3735.443 kb on - strand, within CA264_16035 at 3735.496 kb on - strand, within CA264_16035 at 3735.534 kb on - strand, within CA264_16035 at 3735.544 kb on - strand, within CA264_16035 at 3735.621 kb on - strand, within CA264_16035 at 3735.631 kb on - strand, within CA264_16035 at 3735.631 kb on - strand, within CA264_16035 at 3735.897 kb on - strand, within CA264_16040 at 3735.941 kb on - strand, within CA264_16040 at 3735.958 kb on - strand, within CA264_16040 at 3735.959 kb on + strand, within CA264_16040 at 3735.959 kb on + strand, within CA264_16040 at 3735.960 kb on - strand, within CA264_16040 at 3735.960 kb on - strand, within CA264_16040 at 3735.962 kb on + strand, within CA264_16040 at 3735.963 kb on - strand, within CA264_16040 at 3735.963 kb on - strand, within CA264_16040 at 3735.963 kb on - strand, within CA264_16040 at 3735.982 kb on + strand, within CA264_16040 at 3735.982 kb on + strand, within CA264_16040 at 3735.983 kb on - strand, within CA264_16040 at 3735.984 kb on + strand, within CA264_16040 at 3735.985 kb on - strand, within CA264_16040 at 3735.985 kb on - strand, within CA264_16040 at 3735.987 kb on + strand, within CA264_16040 at 3735.988 kb on - strand, within CA264_16040 at 3735.995 kb on + strand, within CA264_16040 at 3735.996 kb on - strand, within CA264_16040 at 3735.996 kb on - strand, within CA264_16040 at 3736.038 kb on - strand, within CA264_16040 at 3736.070 kb on + strand, within CA264_16040 at 3736.074 kb on + strand, within CA264_16040 at 3736.075 kb on - strand, within CA264_16040 at 3736.165 kb on - strand at 3736.174 kb on - strand at 3736.176 kb on + strand at 3736.176 kb on + strand at 3736.177 kb on - strand at 3736.177 kb on - strand at 3736.228 kb on - strand at 3736.256 kb on + strand at 3736.256 kb on + strand at 3736.266 kb on - strand at 3736.266 kb on - strand at 3736.302 kb on - strand at 3736.302 kb on - strand at 3736.403 kb on + strand, within CA264_16045 at 3736.428 kb on - strand, within CA264_16045 at 3736.498 kb on + strand, within CA264_16045 at 3736.571 kb on - strand, within CA264_16045 at 3736.591 kb on + strand, within CA264_16045 at 3736.592 kb on - strand, within CA264_16045 at 3736.651 kb on + strand, within CA264_16045 at 3736.651 kb on + strand, within CA264_16045 at 3736.651 kb on + strand, within CA264_16045 at 3736.653 kb on + strand, within CA264_16045 at 3736.653 kb on + strand, within CA264_16045 at 3736.654 kb on - strand, within CA264_16045 at 3736.654 kb on - strand, within CA264_16045 at 3736.654 kb on - strand, within CA264_16045 at 3736.654 kb on - strand, within CA264_16045 at 3736.710 kb on - strand, within CA264_16045 at 3736.711 kb on + strand, within CA264_16045
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,734,315 + CA264_16030 0.22 -0.2 3,734,316 - CA264_16030 0.22 +0.5 3,734,316 - CA264_16030 0.22 -0.4 3,734,316 - CA264_16030 0.22 -0.8 3,734,320 - CA264_16030 0.24 -0.5 3,734,320 - CA264_16030 0.24 -0.4 3,734,320 - CA264_16030 0.24 +0.0 3,734,320 - CA264_16030 0.24 +0.6 3,734,386 + CA264_16030 0.44 +0.1 3,734,387 - CA264_16030 0.44 -0.7 3,734,452 + CA264_16030 0.64 -0.7 3,734,452 + CA264_16030 0.64 +0.9 3,734,452 + CA264_16030 0.64 +0.1 3,734,452 + CA264_16030 0.64 -0.6 3,734,452 + CA264_16030 0.64 -0.3 3,734,453 - CA264_16030 0.64 -0.1 3,734,453 - CA264_16030 0.64 -0.3 3,734,453 - CA264_16030 0.64 -1.6 3,734,453 - CA264_16030 0.64 -0.4 3,734,453 - CA264_16030 0.64 +0.4 3,734,477 + CA264_16030 0.72 -0.6 3,734,477 + CA264_16030 0.72 +0.0 3,734,477 + CA264_16030 0.72 +2.1 3,734,483 - CA264_16030 0.73 +0.0 3,734,489 + CA264_16030 0.75 -1.8 3,734,489 + CA264_16030 0.75 -0.0 3,734,509 + CA264_16030 0.81 -0.5 3,734,510 - CA264_16030 0.82 -0.2 3,734,520 + CA264_16030 0.85 +0.0 3,734,520 + CA264_16030 0.85 -0.4 3,734,521 - CA264_16030 0.85 -0.2 3,734,521 - CA264_16030 0.85 -0.3 3,734,598 + -1.1 3,734,598 + -0.8 3,734,630 - +0.1 3,734,630 - -1.2 3,734,641 - -1.1 3,734,844 + -1.3 3,735,037 + -1.3 3,735,047 + -2.1 3,735,047 + -2.0 3,735,050 + +0.6 3,735,068 + +0.2 3,735,112 + -0.3 3,735,182 + -0.7 3,735,185 + -0.4 3,735,281 + -0.4 3,735,281 + +0.4 3,735,283 + -1.2 3,735,312 + -2.1 3,735,312 + -0.2 3,735,379 + CA264_16035 0.17 -2.9 3,735,380 - CA264_16035 0.17 -0.2 3,735,380 - CA264_16035 0.17 +0.5 3,735,383 + CA264_16035 0.18 -0.8 3,735,421 - CA264_16035 0.27 +1.2 3,735,429 + CA264_16035 0.29 -0.6 3,735,429 + CA264_16035 0.29 -2.2 3,735,436 + CA264_16035 0.30 -1.6 3,735,443 - CA264_16035 0.32 -0.8 3,735,496 - CA264_16035 0.44 -1.0 3,735,534 - CA264_16035 0.53 -1.5 3,735,544 - CA264_16035 0.55 -0.3 3,735,621 - CA264_16035 0.73 -0.4 3,735,631 - CA264_16035 0.75 -0.4 3,735,631 - CA264_16035 0.75 -2.0 3,735,897 - CA264_16040 0.34 -0.4 3,735,941 - CA264_16040 0.45 +0.9 3,735,958 - CA264_16040 0.49 -0.0 3,735,959 + CA264_16040 0.49 +0.5 3,735,959 + CA264_16040 0.49 -0.7 3,735,960 - CA264_16040 0.49 -1.2 3,735,960 - CA264_16040 0.49 -0.2 3,735,962 + CA264_16040 0.50 -0.8 3,735,963 - CA264_16040 0.50 -0.5 3,735,963 - CA264_16040 0.50 +0.1 3,735,963 - CA264_16040 0.50 -0.3 3,735,982 + CA264_16040 0.55 -0.9 3,735,982 + CA264_16040 0.55 -0.3 3,735,983 - CA264_16040 0.55 +0.3 3,735,984 + CA264_16040 0.55 +1.3 3,735,985 - CA264_16040 0.55 -0.2 3,735,985 - CA264_16040 0.55 -1.5 3,735,987 + CA264_16040 0.56 -1.0 3,735,988 - CA264_16040 0.56 -0.0 3,735,995 + CA264_16040 0.58 +0.3 3,735,996 - CA264_16040 0.58 +0.3 3,735,996 - CA264_16040 0.58 -0.5 3,736,038 - CA264_16040 0.68 -0.2 3,736,070 + CA264_16040 0.76 -1.1 3,736,074 + CA264_16040 0.77 +0.7 3,736,075 - CA264_16040 0.77 +0.3 3,736,165 - -0.6 3,736,174 - +0.3 3,736,176 + -0.1 3,736,176 + +1.6 3,736,177 - -1.9 3,736,177 - +0.6 3,736,228 - -0.6 3,736,256 + -0.2 3,736,256 + -0.5 3,736,266 - -0.2 3,736,266 - -0.3 3,736,302 - -0.4 3,736,302 - +0.4 3,736,403 + CA264_16045 0.16 -0.1 3,736,428 - CA264_16045 0.18 +1.9 3,736,498 + CA264_16045 0.22 -1.5 3,736,571 - CA264_16045 0.27 +0.2 3,736,591 + CA264_16045 0.29 +0.2 3,736,592 - CA264_16045 0.29 -0.3 3,736,651 + CA264_16045 0.33 -0.4 3,736,651 + CA264_16045 0.33 +0.1 3,736,651 + CA264_16045 0.33 +0.0 3,736,653 + CA264_16045 0.33 -1.1 3,736,653 + CA264_16045 0.33 +0.7 3,736,654 - CA264_16045 0.33 -0.6 3,736,654 - CA264_16045 0.33 -0.2 3,736,654 - CA264_16045 0.33 -0.6 3,736,654 - CA264_16045 0.33 +0.1 3,736,710 - CA264_16045 0.37 +0.0 3,736,711 + CA264_16045 0.37 +0.7
Or see this region's nucleotide sequence