Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15830 and CA264_15835 are separated by 25 nucleotides CA264_15835 and CA264_15840 are separated by 162 nucleotides
CA264_15830: CA264_15830 - hypothetical protein, at 3,694,447 to 3,697,494
_15830
CA264_15835: CA264_15835 - response regulator, at 3,697,520 to 3,697,927
_15835
CA264_15840: CA264_15840 - hypothetical protein, at 3,698,090 to 3,698,932
_15840
Position (kb)
3697
3698 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3696.625 kb on + strand, within CA264_15830 at 3696.628 kb on + strand, within CA264_15830 at 3696.628 kb on + strand, within CA264_15830 at 3696.629 kb on - strand, within CA264_15830 at 3696.629 kb on - strand, within CA264_15830 at 3696.629 kb on - strand, within CA264_15830 at 3696.635 kb on + strand, within CA264_15830 at 3696.636 kb on - strand, within CA264_15830 at 3696.670 kb on + strand, within CA264_15830 at 3696.683 kb on + strand, within CA264_15830 at 3696.683 kb on + strand, within CA264_15830 at 3696.684 kb on - strand, within CA264_15830 at 3696.763 kb on - strand, within CA264_15830 at 3696.839 kb on - strand, within CA264_15830 at 3696.988 kb on + strand, within CA264_15830 at 3697.179 kb on - strand, within CA264_15830 at 3697.179 kb on - strand, within CA264_15830 at 3697.183 kb on + strand, within CA264_15830 at 3697.183 kb on + strand, within CA264_15830 at 3697.183 kb on + strand, within CA264_15830 at 3697.267 kb on + strand at 3697.267 kb on + strand at 3697.304 kb on + strand at 3697.304 kb on + strand at 3697.388 kb on - strand at 3697.466 kb on - strand at 3697.471 kb on + strand at 3697.499 kb on - strand at 3697.507 kb on - strand at 3697.564 kb on + strand, within CA264_15835 at 3697.572 kb on - strand, within CA264_15835 at 3697.617 kb on + strand, within CA264_15835 at 3697.617 kb on + strand, within CA264_15835 at 3697.653 kb on - strand, within CA264_15835 at 3697.662 kb on - strand, within CA264_15835 at 3697.715 kb on - strand, within CA264_15835 at 3697.757 kb on + strand, within CA264_15835 at 3697.807 kb on + strand, within CA264_15835 at 3697.808 kb on - strand, within CA264_15835 at 3697.808 kb on - strand, within CA264_15835 at 3697.871 kb on + strand, within CA264_15835 at 3697.872 kb on - strand, within CA264_15835 at 3697.872 kb on - strand, within CA264_15835 at 3697.908 kb on + strand at 3697.909 kb on - strand at 3697.919 kb on + strand at 3697.920 kb on - strand at 3697.920 kb on - strand at 3697.920 kb on - strand at 3697.925 kb on + strand at 3697.925 kb on + strand at 3697.926 kb on - strand at 3697.926 kb on - strand at 3698.007 kb on + strand at 3698.010 kb on - strand at 3698.031 kb on - strand at 3698.031 kb on - strand at 3698.058 kb on + strand at 3698.062 kb on + strand at 3698.062 kb on + strand at 3698.062 kb on + strand at 3698.083 kb on + strand at 3698.089 kb on + strand at 3698.090 kb on - strand at 3698.142 kb on + strand at 3698.297 kb on + strand, within CA264_15840 at 3698.309 kb on + strand, within CA264_15840 at 3698.310 kb on - strand, within CA264_15840 at 3698.310 kb on - strand, within CA264_15840 at 3698.412 kb on - strand, within CA264_15840 at 3698.412 kb on - strand, within CA264_15840 at 3698.412 kb on - strand, within CA264_15840 at 3698.520 kb on + strand, within CA264_15840 at 3698.520 kb on + strand, within CA264_15840 at 3698.521 kb on - strand, within CA264_15840 at 3698.521 kb on - strand, within CA264_15840 at 3698.574 kb on - strand, within CA264_15840 at 3698.589 kb on - strand, within CA264_15840 at 3698.633 kb on + strand, within CA264_15840 at 3698.894 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,696,625 + CA264_15830 0.71 -0.1 3,696,628 + CA264_15830 0.72 +0.0 3,696,628 + CA264_15830 0.72 +0.3 3,696,629 - CA264_15830 0.72 +0.4 3,696,629 - CA264_15830 0.72 -0.3 3,696,629 - CA264_15830 0.72 +0.5 3,696,635 + CA264_15830 0.72 -0.4 3,696,636 - CA264_15830 0.72 -1.0 3,696,670 + CA264_15830 0.73 +0.0 3,696,683 + CA264_15830 0.73 +0.3 3,696,683 + CA264_15830 0.73 -0.7 3,696,684 - CA264_15830 0.73 -0.3 3,696,763 - CA264_15830 0.76 +0.4 3,696,839 - CA264_15830 0.78 +0.1 3,696,988 + CA264_15830 0.83 +0.3 3,697,179 - CA264_15830 0.90 -0.1 3,697,179 - CA264_15830 0.90 +0.1 3,697,183 + CA264_15830 0.90 +0.1 3,697,183 + CA264_15830 0.90 +0.8 3,697,183 + CA264_15830 0.90 +0.4 3,697,267 + -0.2 3,697,267 + -0.3 3,697,304 + -0.1 3,697,304 + -2.1 3,697,388 - +0.9 3,697,466 - -0.0 3,697,471 + +2.6 3,697,499 - -0.0 3,697,507 - +1.8 3,697,564 + CA264_15835 0.11 -1.5 3,697,572 - CA264_15835 0.13 +1.0 3,697,617 + CA264_15835 0.24 -0.5 3,697,617 + CA264_15835 0.24 +1.6 3,697,653 - CA264_15835 0.33 -0.2 3,697,662 - CA264_15835 0.35 +0.2 3,697,715 - CA264_15835 0.48 +0.3 3,697,757 + CA264_15835 0.58 -0.3 3,697,807 + CA264_15835 0.70 +0.2 3,697,808 - CA264_15835 0.71 -0.7 3,697,808 - CA264_15835 0.71 +0.9 3,697,871 + CA264_15835 0.86 +0.3 3,697,872 - CA264_15835 0.86 +0.1 3,697,872 - CA264_15835 0.86 +1.2 3,697,908 + +0.1 3,697,909 - -0.4 3,697,919 + -2.7 3,697,920 - -0.4 3,697,920 - -0.7 3,697,920 - +0.4 3,697,925 + +0.3 3,697,925 + +0.6 3,697,926 - -1.1 3,697,926 - -0.3 3,698,007 + +1.4 3,698,010 - -0.3 3,698,031 - +0.3 3,698,031 - -0.6 3,698,058 + +0.5 3,698,062 + +0.9 3,698,062 + -0.3 3,698,062 + +0.8 3,698,083 + +0.0 3,698,089 + -0.0 3,698,090 - +0.2 3,698,142 + +1.0 3,698,297 + CA264_15840 0.25 -2.0 3,698,309 + CA264_15840 0.26 -2.2 3,698,310 - CA264_15840 0.26 -0.5 3,698,310 - CA264_15840 0.26 -1.2 3,698,412 - CA264_15840 0.38 +1.1 3,698,412 - CA264_15840 0.38 +0.9 3,698,412 - CA264_15840 0.38 -1.8 3,698,520 + CA264_15840 0.51 +0.1 3,698,520 + CA264_15840 0.51 +0.1 3,698,521 - CA264_15840 0.51 -0.3 3,698,521 - CA264_15840 0.51 -0.2 3,698,574 - CA264_15840 0.57 -1.0 3,698,589 - CA264_15840 0.59 +1.5 3,698,633 + CA264_15840 0.64 +0.2 3,698,894 + +0.8
Or see this region's nucleotide sequence