Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13775 and CA264_13780 are separated by 163 nucleotides CA264_13780 and CA264_13785 are separated by 112 nucleotides CA264_13785 and CA264_13790 are separated by 60 nucleotides CA264_13790 and CA264_13795 are separated by 4 nucleotides
CA264_13775: CA264_13775 - hypothetical protein, at 3,218,716 to 3,220,203
_13775
CA264_13780: CA264_13780 - ribonuclease Y, at 3,220,367 to 3,221,965
_13780
CA264_13785: CA264_13785 - cell division protein ZapA, at 3,222,078 to 3,222,365
_13785
CA264_13790: CA264_13790 - hypothetical protein, at 3,222,426 to 3,222,722
_13790
CA264_13795: CA264_13795 - phenylalanine--tRNA ligase subunit beta, at 3,222,727 to 3,225,144
_13795
Position (kb)
3220
3221
3222 Strain fitness (log2 ratio)
-2
-1
0
1 at 3219.439 kb on + strand, within CA264_13775 at 3219.471 kb on + strand, within CA264_13775 at 3219.474 kb on + strand, within CA264_13775 at 3219.474 kb on + strand, within CA264_13775 at 3219.474 kb on + strand, within CA264_13775 at 3219.482 kb on + strand, within CA264_13775 at 3219.499 kb on - strand, within CA264_13775 at 3219.508 kb on + strand, within CA264_13775 at 3219.509 kb on - strand, within CA264_13775 at 3219.546 kb on - strand, within CA264_13775 at 3219.598 kb on - strand, within CA264_13775 at 3219.598 kb on - strand, within CA264_13775 at 3219.631 kb on - strand, within CA264_13775 at 3219.662 kb on + strand, within CA264_13775 at 3219.801 kb on + strand, within CA264_13775 at 3219.896 kb on + strand, within CA264_13775 at 3219.912 kb on - strand, within CA264_13775 at 3219.912 kb on - strand, within CA264_13775 at 3219.912 kb on - strand, within CA264_13775 at 3219.955 kb on - strand, within CA264_13775 at 3219.955 kb on - strand, within CA264_13775 at 3219.998 kb on - strand, within CA264_13775 at 3219.998 kb on - strand, within CA264_13775 at 3219.998 kb on - strand, within CA264_13775 at 3220.016 kb on + strand, within CA264_13775 at 3220.054 kb on - strand, within CA264_13775 at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.171 kb on + strand at 3220.172 kb on - strand at 3220.172 kb on - strand at 3220.172 kb on - strand at 3220.172 kb on - strand at 3220.175 kb on + strand at 3220.176 kb on - strand at 3220.195 kb on - strand at 3220.202 kb on - strand at 3220.295 kb on - strand at 3220.352 kb on - strand at 3220.360 kb on - strand at 3221.969 kb on + strand at 3221.969 kb on + strand at 3221.970 kb on - strand at 3221.989 kb on - strand at 3221.995 kb on + strand at 3221.996 kb on - strand at 3221.996 kb on - strand at 3221.996 kb on - strand at 3221.998 kb on - strand at 3222.086 kb on + strand at 3222.097 kb on - strand at 3222.525 kb on - strand, within CA264_13790 at 3222.536 kb on + strand, within CA264_13790 at 3222.537 kb on - strand, within CA264_13790 at 3222.610 kb on - strand, within CA264_13790 at 3222.728 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,219,439 + CA264_13775 0.49 -0.0 3,219,471 + CA264_13775 0.51 -1.8 3,219,474 + CA264_13775 0.51 +0.1 3,219,474 + CA264_13775 0.51 +0.8 3,219,474 + CA264_13775 0.51 -0.3 3,219,482 + CA264_13775 0.51 +1.5 3,219,499 - CA264_13775 0.53 +0.9 3,219,508 + CA264_13775 0.53 -0.6 3,219,509 - CA264_13775 0.53 -1.0 3,219,546 - CA264_13775 0.56 -1.7 3,219,598 - CA264_13775 0.59 -1.4 3,219,598 - CA264_13775 0.59 -0.0 3,219,631 - CA264_13775 0.61 -1.6 3,219,662 + CA264_13775 0.64 +0.3 3,219,801 + CA264_13775 0.73 -1.2 3,219,896 + CA264_13775 0.79 -0.3 3,219,912 - CA264_13775 0.80 +0.5 3,219,912 - CA264_13775 0.80 +0.2 3,219,912 - CA264_13775 0.80 +0.2 3,219,955 - CA264_13775 0.83 +0.3 3,219,955 - CA264_13775 0.83 -0.7 3,219,998 - CA264_13775 0.86 -0.5 3,219,998 - CA264_13775 0.86 -0.3 3,219,998 - CA264_13775 0.86 -0.6 3,220,016 + CA264_13775 0.87 -0.9 3,220,054 - CA264_13775 0.90 -0.4 3,220,171 + -1.0 3,220,171 + -0.2 3,220,171 + -0.3 3,220,171 + -1.6 3,220,171 + -0.5 3,220,172 - +0.3 3,220,172 - -0.4 3,220,172 - -0.1 3,220,172 - -0.5 3,220,175 + +0.2 3,220,176 - -0.9 3,220,195 - -0.1 3,220,202 - -0.9 3,220,295 - +0.2 3,220,352 - -0.6 3,220,360 - -0.9 3,221,969 + -0.2 3,221,969 + +0.1 3,221,970 - -0.3 3,221,989 - -1.0 3,221,995 + +0.7 3,221,996 - +0.8 3,221,996 - -0.2 3,221,996 - +0.5 3,221,998 - -0.1 3,222,086 + -1.6 3,222,097 - +0.5 3,222,525 - CA264_13790 0.33 -0.1 3,222,536 + CA264_13790 0.37 -0.7 3,222,537 - CA264_13790 0.37 -1.5 3,222,610 - CA264_13790 0.62 -1.5 3,222,728 + -0.9
Or see this region's nucleotide sequence