Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13715 and CA264_13720 are separated by 134 nucleotides CA264_13720 and CA264_13725 are separated by 2 nucleotides CA264_13725 and CA264_13730 are separated by 154 nucleotides CA264_13730 and CA264_13735 are separated by 78 nucleotides
CA264_13715: CA264_13715 - sorbosone dehydrogenase, at 3,205,817 to 3,207,022
_13715
CA264_13720: CA264_13720 - hypothetical protein, at 3,207,157 to 3,207,711
_13720
CA264_13725: CA264_13725 - alpha/beta hydrolase, at 3,207,714 to 3,208,517
_13725
CA264_13730: CA264_13730 - hypothetical protein, at 3,208,672 to 3,209,214
_13730
CA264_13735: CA264_13735 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 3,209,293 to 3,210,186
_13735
Position (kb)
3207
3208
3209 Strain fitness (log2 ratio)
-2
-1
0
1 at 3206.805 kb on + strand, within CA264_13715 at 3206.805 kb on + strand, within CA264_13715 at 3206.806 kb on - strand, within CA264_13715 at 3207.042 kb on + strand at 3207.042 kb on + strand at 3207.042 kb on + strand at 3207.050 kb on + strand at 3207.061 kb on - strand at 3207.099 kb on + strand at 3207.104 kb on + strand at 3207.105 kb on - strand at 3207.105 kb on - strand at 3207.108 kb on + strand at 3207.109 kb on - strand at 3207.109 kb on - strand at 3207.110 kb on + strand at 3207.124 kb on + strand at 3207.156 kb on + strand at 3207.195 kb on - strand at 3207.195 kb on - strand at 3207.387 kb on + strand, within CA264_13720 at 3207.388 kb on - strand, within CA264_13720 at 3207.388 kb on - strand, within CA264_13720 at 3207.388 kb on - strand, within CA264_13720 at 3207.437 kb on - strand, within CA264_13720 at 3207.500 kb on + strand, within CA264_13720 at 3207.513 kb on - strand, within CA264_13720 at 3207.632 kb on + strand, within CA264_13720 at 3207.668 kb on - strand at 3207.716 kb on - strand at 3207.894 kb on - strand, within CA264_13725 at 3208.023 kb on + strand, within CA264_13725 at 3208.029 kb on - strand, within CA264_13725 at 3208.030 kb on + strand, within CA264_13725 at 3208.031 kb on - strand, within CA264_13725 at 3208.129 kb on + strand, within CA264_13725 at 3208.179 kb on + strand, within CA264_13725 at 3208.369 kb on + strand, within CA264_13725 at 3208.369 kb on + strand, within CA264_13725 at 3208.369 kb on + strand, within CA264_13725 at 3208.370 kb on - strand, within CA264_13725 at 3208.378 kb on + strand, within CA264_13725 at 3208.411 kb on + strand, within CA264_13725 at 3208.412 kb on - strand, within CA264_13725 at 3208.412 kb on - strand, within CA264_13725 at 3208.480 kb on + strand at 3208.530 kb on + strand at 3208.530 kb on + strand at 3208.532 kb on + strand at 3208.532 kb on + strand at 3208.533 kb on - strand at 3208.533 kb on - strand at 3208.563 kb on + strand at 3208.564 kb on - strand at 3208.564 kb on - strand at 3208.567 kb on + strand at 3208.568 kb on - strand at 3208.573 kb on + strand at 3208.577 kb on - strand at 3208.577 kb on - strand at 3208.577 kb on - strand at 3208.577 kb on - strand at 3208.596 kb on + strand at 3208.597 kb on - strand at 3208.597 kb on - strand at 3208.597 kb on - strand at 3208.597 kb on - strand at 3208.623 kb on + strand at 3208.736 kb on + strand, within CA264_13730 at 3208.736 kb on + strand, within CA264_13730 at 3208.784 kb on + strand, within CA264_13730 at 3208.800 kb on - strand, within CA264_13730 at 3208.802 kb on - strand, within CA264_13730 at 3208.812 kb on + strand, within CA264_13730 at 3208.812 kb on + strand, within CA264_13730 at 3208.821 kb on + strand, within CA264_13730 at 3208.950 kb on + strand, within CA264_13730 at 3208.951 kb on - strand, within CA264_13730 at 3208.966 kb on - strand, within CA264_13730 at 3209.130 kb on + strand, within CA264_13730 at 3209.131 kb on - strand, within CA264_13730 at 3209.151 kb on + strand, within CA264_13730 at 3209.217 kb on + strand at 3209.217 kb on + strand at 3209.261 kb on + strand at 3209.262 kb on - strand at 3209.275 kb on - strand at 3209.321 kb on - strand at 3209.322 kb on + strand at 3209.323 kb on - strand at 3209.323 kb on - strand at 3209.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,206,805 + CA264_13715 0.82 +0.3 3,206,805 + CA264_13715 0.82 +0.2 3,206,806 - CA264_13715 0.82 +1.0 3,207,042 + -1.0 3,207,042 + +0.7 3,207,042 + +0.1 3,207,050 + -0.3 3,207,061 - -0.8 3,207,099 + -0.3 3,207,104 + +0.7 3,207,105 - +1.0 3,207,105 - +0.4 3,207,108 + +0.2 3,207,109 - -0.2 3,207,109 - +0.2 3,207,110 + +0.1 3,207,124 + -1.3 3,207,156 + +0.1 3,207,195 - +0.2 3,207,195 - +0.9 3,207,387 + CA264_13720 0.41 -0.8 3,207,388 - CA264_13720 0.42 +0.1 3,207,388 - CA264_13720 0.42 -0.2 3,207,388 - CA264_13720 0.42 +0.0 3,207,437 - CA264_13720 0.50 +1.0 3,207,500 + CA264_13720 0.62 +0.8 3,207,513 - CA264_13720 0.64 -0.8 3,207,632 + CA264_13720 0.86 -1.3 3,207,668 - +0.7 3,207,716 - -0.4 3,207,894 - CA264_13725 0.22 -0.6 3,208,023 + CA264_13725 0.38 -1.5 3,208,029 - CA264_13725 0.39 -0.7 3,208,030 + CA264_13725 0.39 +0.7 3,208,031 - CA264_13725 0.39 -1.5 3,208,129 + CA264_13725 0.52 -0.8 3,208,179 + CA264_13725 0.58 -0.2 3,208,369 + CA264_13725 0.81 -0.3 3,208,369 + CA264_13725 0.81 -0.3 3,208,369 + CA264_13725 0.81 +0.7 3,208,370 - CA264_13725 0.82 -0.7 3,208,378 + CA264_13725 0.83 -0.9 3,208,411 + CA264_13725 0.87 +0.7 3,208,412 - CA264_13725 0.87 +0.5 3,208,412 - CA264_13725 0.87 -0.2 3,208,480 + +1.6 3,208,530 + -0.3 3,208,530 + +0.2 3,208,532 + -0.4 3,208,532 + +0.2 3,208,533 - -2.1 3,208,533 - +0.0 3,208,563 + -0.3 3,208,564 - +0.3 3,208,564 - +0.0 3,208,567 + +0.6 3,208,568 - -0.6 3,208,573 + +0.8 3,208,577 - +0.3 3,208,577 - +0.3 3,208,577 - -0.7 3,208,577 - -0.3 3,208,596 + +0.3 3,208,597 - -0.3 3,208,597 - +0.7 3,208,597 - -0.3 3,208,597 - +0.4 3,208,623 + +0.3 3,208,736 + CA264_13730 0.12 +0.0 3,208,736 + CA264_13730 0.12 +1.2 3,208,784 + CA264_13730 0.21 +0.3 3,208,800 - CA264_13730 0.24 -0.3 3,208,802 - CA264_13730 0.24 -1.0 3,208,812 + CA264_13730 0.26 -0.5 3,208,812 + CA264_13730 0.26 -0.2 3,208,821 + CA264_13730 0.27 -0.2 3,208,950 + CA264_13730 0.51 +0.4 3,208,951 - CA264_13730 0.51 -0.2 3,208,966 - CA264_13730 0.54 +0.1 3,209,130 + CA264_13730 0.84 -0.6 3,209,131 - CA264_13730 0.85 +0.2 3,209,151 + CA264_13730 0.88 -0.7 3,209,217 + -0.4 3,209,217 + +0.1 3,209,261 + -0.5 3,209,262 - -1.0 3,209,275 - -0.7 3,209,321 - -0.1 3,209,322 + -0.3 3,209,323 - +0.5 3,209,323 - -0.1 3,209,323 - -0.0
Or see this region's nucleotide sequence