Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12095 and CA264_12100 are separated by 73 nucleotides CA264_12100 and CA264_12105 are separated by 111 nucleotides CA264_12105 and CA264_12110 are separated by 121 nucleotides
CA264_12095: CA264_12095 - hypothetical protein, at 2,820,759 to 2,822,327
_12095
CA264_12100: CA264_12100 - NUDIX hydrolase, at 2,822,401 to 2,822,964
_12100
CA264_12105: CA264_12105 - methyltransferase, TIGR04290 family, at 2,823,076 to 2,823,891
_12105
CA264_12110: CA264_12110 - glycosyltransferase, at 2,824,013 to 2,825,122
_12110
Position (kb)
2823
2824 Strain fitness (log2 ratio)
-1
0
1 at 2822.106 kb on - strand, within CA264_12095 at 2822.143 kb on + strand, within CA264_12095 at 2822.173 kb on - strand at 2822.173 kb on - strand at 2822.176 kb on - strand at 2822.210 kb on + strand at 2822.296 kb on + strand at 2822.392 kb on + strand at 2822.393 kb on - strand at 2822.393 kb on - strand at 2822.402 kb on + strand at 2822.434 kb on - strand at 2822.509 kb on + strand, within CA264_12100 at 2822.509 kb on + strand, within CA264_12100 at 2822.510 kb on - strand, within CA264_12100 at 2822.574 kb on - strand, within CA264_12100 at 2822.574 kb on - strand, within CA264_12100 at 2822.577 kb on - strand, within CA264_12100 at 2822.579 kb on + strand, within CA264_12100 at 2822.760 kb on - strand, within CA264_12100 at 2822.834 kb on + strand, within CA264_12100 at 2822.837 kb on + strand, within CA264_12100 at 2822.870 kb on - strand, within CA264_12100 at 2822.976 kb on - strand at 2822.977 kb on + strand at 2822.981 kb on + strand at 2822.981 kb on + strand at 2822.982 kb on - strand at 2822.984 kb on + strand at 2823.102 kb on - strand at 2823.515 kb on + strand, within CA264_12105 at 2823.700 kb on + strand, within CA264_12105 at 2823.707 kb on + strand, within CA264_12105 at 2823.767 kb on + strand, within CA264_12105 at 2823.767 kb on + strand, within CA264_12105 at 2823.768 kb on - strand, within CA264_12105 at 2823.768 kb on - strand, within CA264_12105 at 2823.768 kb on - strand, within CA264_12105 at 2823.768 kb on - strand, within CA264_12105 at 2823.789 kb on + strand, within CA264_12105 at 2823.808 kb on + strand, within CA264_12105 at 2823.808 kb on + strand, within CA264_12105 at 2823.808 kb on + strand, within CA264_12105 at 2823.809 kb on - strand, within CA264_12105 at 2823.928 kb on - strand at 2823.928 kb on - strand at 2823.956 kb on + strand at 2823.956 kb on + strand at 2824.014 kb on + strand at 2824.062 kb on - strand at 2824.156 kb on + strand, within CA264_12110 at 2824.156 kb on + strand, within CA264_12110 at 2824.448 kb on + strand, within CA264_12110 at 2824.461 kb on + strand, within CA264_12110 at 2824.630 kb on - strand, within CA264_12110 at 2824.657 kb on - strand, within CA264_12110 at 2824.713 kb on + strand, within CA264_12110 at 2824.714 kb on - strand, within CA264_12110 at 2824.717 kb on + strand, within CA264_12110 at 2824.718 kb on - strand, within CA264_12110 at 2824.718 kb on - strand, within CA264_12110 at 2824.746 kb on + strand, within CA264_12110 at 2824.747 kb on - strand, within CA264_12110 at 2824.794 kb on + strand, within CA264_12110 at 2824.795 kb on - strand, within CA264_12110 at 2824.861 kb on - strand, within CA264_12110
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,822,106 - CA264_12095 0.86 +0.0 2,822,143 + CA264_12095 0.88 -0.5 2,822,173 - -0.2 2,822,173 - -0.0 2,822,176 - +1.0 2,822,210 + +0.8 2,822,296 + +0.1 2,822,392 + +0.7 2,822,393 - -0.5 2,822,393 - +0.5 2,822,402 + +0.1 2,822,434 - +1.5 2,822,509 + CA264_12100 0.19 -0.1 2,822,509 + CA264_12100 0.19 +0.1 2,822,510 - CA264_12100 0.19 +0.0 2,822,574 - CA264_12100 0.31 +0.1 2,822,574 - CA264_12100 0.31 +0.0 2,822,577 - CA264_12100 0.31 -0.4 2,822,579 + CA264_12100 0.32 +0.3 2,822,760 - CA264_12100 0.64 -0.1 2,822,834 + CA264_12100 0.77 +0.6 2,822,837 + CA264_12100 0.77 +0.1 2,822,870 - CA264_12100 0.83 +0.1 2,822,976 - +0.4 2,822,977 + -0.2 2,822,981 + -0.4 2,822,981 + +1.1 2,822,982 - -0.1 2,822,984 + -0.2 2,823,102 - -0.8 2,823,515 + CA264_12105 0.54 -1.0 2,823,700 + CA264_12105 0.76 -0.1 2,823,707 + CA264_12105 0.77 -0.9 2,823,767 + CA264_12105 0.85 -0.1 2,823,767 + CA264_12105 0.85 -0.3 2,823,768 - CA264_12105 0.85 +0.4 2,823,768 - CA264_12105 0.85 +0.4 2,823,768 - CA264_12105 0.85 +0.3 2,823,768 - CA264_12105 0.85 +0.6 2,823,789 + CA264_12105 0.87 -0.1 2,823,808 + CA264_12105 0.90 -0.8 2,823,808 + CA264_12105 0.90 -0.3 2,823,808 + CA264_12105 0.90 +0.0 2,823,809 - CA264_12105 0.90 +0.1 2,823,928 - +0.9 2,823,928 - -0.0 2,823,956 + -1.5 2,823,956 + -0.1 2,824,014 + +0.2 2,824,062 - +0.5 2,824,156 + CA264_12110 0.13 +0.9 2,824,156 + CA264_12110 0.13 -0.5 2,824,448 + CA264_12110 0.39 -0.2 2,824,461 + CA264_12110 0.40 -0.9 2,824,630 - CA264_12110 0.56 +0.0 2,824,657 - CA264_12110 0.58 +0.8 2,824,713 + CA264_12110 0.63 +0.5 2,824,714 - CA264_12110 0.63 +1.2 2,824,717 + CA264_12110 0.63 -0.3 2,824,718 - CA264_12110 0.64 -0.1 2,824,718 - CA264_12110 0.64 -1.0 2,824,746 + CA264_12110 0.66 -0.5 2,824,747 - CA264_12110 0.66 -0.5 2,824,794 + CA264_12110 0.70 -0.6 2,824,795 - CA264_12110 0.70 -1.7 2,824,861 - CA264_12110 0.76 -0.8
Or see this region's nucleotide sequence