Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10065 and CA264_10070 are separated by 402 nucleotides CA264_10070 and CA264_10075 are separated by 478 nucleotides
CA264_10065: CA264_10065 - DNA-binding response regulator, at 2,334,890 to 2,335,522
_10065
CA264_10070: CA264_10070 - hypothetical protein, at 2,335,925 to 2,336,308
_10070
CA264_10075: CA264_10075 - hypothetical protein, at 2,336,787 to 2,336,885
_10075
Position (kb)
2335
2336
2337 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2334.975 kb on - strand, within CA264_10065 at 2334.976 kb on + strand, within CA264_10065 at 2334.976 kb on + strand, within CA264_10065 at 2334.977 kb on - strand, within CA264_10065 at 2334.977 kb on - strand, within CA264_10065 at 2335.012 kb on + strand, within CA264_10065 at 2335.123 kb on + strand, within CA264_10065 at 2335.124 kb on - strand, within CA264_10065 at 2335.124 kb on - strand, within CA264_10065 at 2335.268 kb on + strand, within CA264_10065 at 2335.269 kb on - strand, within CA264_10065 at 2335.269 kb on - strand, within CA264_10065 at 2335.269 kb on - strand, within CA264_10065 at 2335.487 kb on + strand at 2335.488 kb on - strand at 2335.531 kb on + strand at 2335.600 kb on - strand at 2335.628 kb on + strand at 2335.628 kb on + strand at 2335.629 kb on - strand at 2335.641 kb on + strand at 2335.669 kb on - strand at 2335.721 kb on + strand at 2335.721 kb on + strand at 2335.731 kb on - strand at 2335.731 kb on - strand at 2335.733 kb on - strand at 2335.739 kb on + strand at 2335.739 kb on + strand at 2335.739 kb on + strand at 2335.740 kb on - strand at 2335.740 kb on - strand at 2335.749 kb on + strand at 2335.749 kb on + strand at 2335.749 kb on + strand at 2335.750 kb on - strand at 2335.853 kb on + strand at 2335.854 kb on - strand at 2335.854 kb on - strand at 2335.860 kb on - strand at 2335.860 kb on - strand at 2335.880 kb on - strand at 2335.880 kb on - strand at 2335.880 kb on - strand at 2335.927 kb on - strand at 2335.927 kb on - strand at 2335.936 kb on + strand at 2335.937 kb on - strand at 2336.057 kb on + strand, within CA264_10070 at 2336.093 kb on + strand, within CA264_10070 at 2336.094 kb on - strand, within CA264_10070 at 2336.094 kb on - strand, within CA264_10070 at 2336.094 kb on - strand, within CA264_10070 at 2336.094 kb on - strand, within CA264_10070 at 2336.122 kb on + strand, within CA264_10070 at 2336.123 kb on - strand, within CA264_10070 at 2336.132 kb on - strand, within CA264_10070 at 2336.132 kb on - strand, within CA264_10070 at 2336.321 kb on + strand at 2336.321 kb on + strand at 2336.339 kb on + strand at 2336.349 kb on + strand at 2336.350 kb on - strand at 2336.353 kb on - strand at 2336.353 kb on - strand at 2336.353 kb on - strand at 2336.358 kb on + strand at 2336.358 kb on + strand at 2336.359 kb on - strand at 2336.359 kb on - strand at 2336.359 kb on - strand at 2336.359 kb on - strand at 2336.359 kb on - strand at 2336.362 kb on + strand at 2336.362 kb on + strand at 2336.380 kb on - strand at 2336.380 kb on - strand at 2336.389 kb on - strand at 2336.432 kb on + strand at 2336.432 kb on + strand at 2336.433 kb on - strand at 2336.445 kb on + strand at 2336.457 kb on + strand at 2336.471 kb on + strand at 2336.471 kb on + strand at 2336.471 kb on + strand at 2336.586 kb on - strand at 2336.596 kb on + strand at 2336.616 kb on + strand at 2336.617 kb on - strand at 2336.657 kb on + strand at 2336.699 kb on + strand at 2336.700 kb on - strand at 2336.719 kb on + strand at 2336.720 kb on - strand at 2336.720 kb on - strand at 2336.761 kb on - strand at 2336.771 kb on - strand at 2336.900 kb on - strand at 2336.929 kb on + strand at 2336.953 kb on + strand at 2336.953 kb on + strand at 2336.975 kb on + strand at 2336.994 kb on + strand at 2336.994 kb on + strand at 2337.071 kb on + strand at 2337.079 kb on + strand at 2337.155 kb on + strand at 2337.191 kb on - strand at 2337.237 kb on + strand at 2337.246 kb on - strand at 2337.283 kb on - strand at 2337.291 kb on - strand at 2337.291 kb on - strand at 2337.305 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,334,975 - CA264_10065 0.13 -0.4 2,334,976 + CA264_10065 0.14 -2.1 2,334,976 + CA264_10065 0.14 -0.8 2,334,977 - CA264_10065 0.14 -1.1 2,334,977 - CA264_10065 0.14 -1.2 2,335,012 + CA264_10065 0.19 -0.4 2,335,123 + CA264_10065 0.37 -0.8 2,335,124 - CA264_10065 0.37 +0.4 2,335,124 - CA264_10065 0.37 -1.4 2,335,268 + CA264_10065 0.60 +0.2 2,335,269 - CA264_10065 0.60 +0.3 2,335,269 - CA264_10065 0.60 -1.0 2,335,269 - CA264_10065 0.60 +0.1 2,335,487 + -1.3 2,335,488 - +0.1 2,335,531 + +0.6 2,335,600 - +0.1 2,335,628 + +0.7 2,335,628 + -0.4 2,335,629 - -0.3 2,335,641 + +0.8 2,335,669 - -0.6 2,335,721 + -0.3 2,335,721 + -0.1 2,335,731 - -0.5 2,335,731 - +1.2 2,335,733 - +0.3 2,335,739 + -0.2 2,335,739 + +0.7 2,335,739 + +0.1 2,335,740 - -0.1 2,335,740 - +0.1 2,335,749 + +0.8 2,335,749 + -1.2 2,335,749 + +0.8 2,335,750 - -0.0 2,335,853 + +0.3 2,335,854 - +0.8 2,335,854 - -0.4 2,335,860 - -0.1 2,335,860 - +0.2 2,335,880 - -0.6 2,335,880 - +0.1 2,335,880 - +0.3 2,335,927 - +2.1 2,335,927 - +0.8 2,335,936 + +0.4 2,335,937 - +0.8 2,336,057 + CA264_10070 0.34 -0.1 2,336,093 + CA264_10070 0.44 -0.0 2,336,094 - CA264_10070 0.44 +1.1 2,336,094 - CA264_10070 0.44 +0.1 2,336,094 - CA264_10070 0.44 +0.5 2,336,094 - CA264_10070 0.44 +1.7 2,336,122 + CA264_10070 0.51 +0.2 2,336,123 - CA264_10070 0.52 -0.2 2,336,132 - CA264_10070 0.54 +1.5 2,336,132 - CA264_10070 0.54 +0.5 2,336,321 + -0.1 2,336,321 + -2.1 2,336,339 + +0.6 2,336,349 + -0.6 2,336,350 - +0.4 2,336,353 - +0.2 2,336,353 - +1.5 2,336,353 - -0.9 2,336,358 + -1.0 2,336,358 + -0.5 2,336,359 - -2.4 2,336,359 - -0.4 2,336,359 - +1.2 2,336,359 - +0.8 2,336,359 - -0.1 2,336,362 + -0.1 2,336,362 + +0.7 2,336,380 - -1.0 2,336,380 - +0.3 2,336,389 - +1.3 2,336,432 + -0.0 2,336,432 + -0.7 2,336,433 - -1.1 2,336,445 + -0.3 2,336,457 + +0.1 2,336,471 + +0.1 2,336,471 + -0.6 2,336,471 + +0.8 2,336,586 - +0.7 2,336,596 + +0.1 2,336,616 + -1.3 2,336,617 - -1.1 2,336,657 + +0.3 2,336,699 + -0.8 2,336,700 - +0.4 2,336,719 + -0.6 2,336,720 - +1.4 2,336,720 - -0.4 2,336,761 - +0.2 2,336,771 - +1.2 2,336,900 - -0.0 2,336,929 + -0.3 2,336,953 + -0.2 2,336,953 + -0.0 2,336,975 + -0.2 2,336,994 + -0.9 2,336,994 + -0.7 2,337,071 + -0.2 2,337,079 + +0.6 2,337,155 + -0.3 2,337,191 - -0.8 2,337,237 + -0.1 2,337,246 - -0.8 2,337,283 - -1.0 2,337,291 - +0.1 2,337,291 - +0.2 2,337,305 + +0.0
Or see this region's nucleotide sequence