Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09175 and CA264_09180 are separated by 143 nucleotides CA264_09180 and CA264_09185 are separated by 352 nucleotides CA264_09185 and CA264_09190 overlap by 4 nucleotides
CA264_09175: CA264_09175 - nuclease PIN, at 2,149,924 to 2,150,787
_09175
CA264_09180: CA264_09180 - DNA-binding response regulator, at 2,150,931 to 2,151,581
_09180
CA264_09185: CA264_09185 - hypothetical protein, at 2,151,934 to 2,152,476
_09185
CA264_09190: CA264_09190 - hypothetical protein, at 2,152,473 to 2,152,808
_09190
Position (kb)
2150
2151
2152 Strain fitness (log2 ratio)
-2
-1
0
1 at 2149.940 kb on - strand at 2149.981 kb on - strand at 2150.092 kb on - strand, within CA264_09175 at 2150.153 kb on - strand, within CA264_09175 at 2150.192 kb on + strand, within CA264_09175 at 2150.233 kb on + strand, within CA264_09175 at 2150.369 kb on + strand, within CA264_09175 at 2150.391 kb on + strand, within CA264_09175 at 2150.519 kb on + strand, within CA264_09175 at 2150.794 kb on + strand at 2150.795 kb on - strand at 2150.795 kb on - strand at 2150.795 kb on - strand at 2150.803 kb on + strand at 2150.804 kb on - strand at 2150.821 kb on + strand at 2150.821 kb on + strand at 2150.832 kb on - strand at 2150.832 kb on - strand at 2150.832 kb on - strand at 2150.895 kb on + strand at 2150.896 kb on - strand at 2150.928 kb on - strand at 2150.932 kb on + strand at 2151.072 kb on - strand, within CA264_09180 at 2151.072 kb on - strand, within CA264_09180 at 2151.074 kb on - strand, within CA264_09180 at 2151.162 kb on - strand, within CA264_09180 at 2151.163 kb on + strand, within CA264_09180 at 2151.164 kb on - strand, within CA264_09180 at 2151.208 kb on + strand, within CA264_09180 at 2151.208 kb on + strand, within CA264_09180 at 2151.208 kb on + strand, within CA264_09180 at 2151.209 kb on - strand, within CA264_09180 at 2151.313 kb on + strand, within CA264_09180 at 2151.313 kb on + strand, within CA264_09180 at 2151.314 kb on - strand, within CA264_09180 at 2151.314 kb on - strand, within CA264_09180 at 2151.346 kb on - strand, within CA264_09180 at 2151.351 kb on + strand, within CA264_09180 at 2151.352 kb on - strand, within CA264_09180 at 2151.352 kb on - strand, within CA264_09180 at 2151.429 kb on + strand, within CA264_09180 at 2151.430 kb on - strand, within CA264_09180 at 2151.499 kb on - strand, within CA264_09180 at 2151.499 kb on - strand, within CA264_09180 at 2151.576 kb on - strand at 2151.581 kb on + strand at 2151.593 kb on + strand at 2151.594 kb on - strand at 2151.594 kb on - strand at 2151.624 kb on - strand at 2151.627 kb on - strand at 2151.765 kb on - strand at 2151.767 kb on - strand at 2151.776 kb on + strand at 2151.810 kb on - strand at 2151.882 kb on + strand at 2151.894 kb on + strand at 2151.900 kb on + strand at 2151.901 kb on - strand at 2151.992 kb on - strand, within CA264_09185 at 2152.037 kb on + strand, within CA264_09185 at 2152.037 kb on + strand, within CA264_09185 at 2152.063 kb on - strand, within CA264_09185 at 2152.154 kb on + strand, within CA264_09185 at 2152.305 kb on + strand, within CA264_09185 at 2152.306 kb on - strand, within CA264_09185 at 2152.374 kb on + strand, within CA264_09185 at 2152.377 kb on - strand, within CA264_09185 at 2152.456 kb on - strand at 2152.485 kb on + strand at 2152.485 kb on + strand at 2152.486 kb on - strand at 2152.487 kb on + strand at 2152.488 kb on - strand at 2152.550 kb on + strand, within CA264_09190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,149,940 - -0.3 2,149,981 - -1.0 2,150,092 - CA264_09175 0.19 -0.4 2,150,153 - CA264_09175 0.27 +0.0 2,150,192 + CA264_09175 0.31 +0.5 2,150,233 + CA264_09175 0.36 -0.8 2,150,369 + CA264_09175 0.52 +0.4 2,150,391 + CA264_09175 0.54 +0.5 2,150,519 + CA264_09175 0.69 -1.5 2,150,794 + +0.2 2,150,795 - +0.1 2,150,795 - -0.1 2,150,795 - -0.7 2,150,803 + -0.1 2,150,804 - +0.6 2,150,821 + -0.3 2,150,821 + -0.4 2,150,832 - -0.1 2,150,832 - +0.4 2,150,832 - -1.1 2,150,895 + -0.3 2,150,896 - -0.4 2,150,928 - +0.1 2,150,932 + +0.5 2,151,072 - CA264_09180 0.22 -0.4 2,151,072 - CA264_09180 0.22 -0.1 2,151,074 - CA264_09180 0.22 -0.2 2,151,162 - CA264_09180 0.35 -1.2 2,151,163 + CA264_09180 0.36 -0.5 2,151,164 - CA264_09180 0.36 -0.4 2,151,208 + CA264_09180 0.43 -0.0 2,151,208 + CA264_09180 0.43 -0.3 2,151,208 + CA264_09180 0.43 -0.3 2,151,209 - CA264_09180 0.43 +0.1 2,151,313 + CA264_09180 0.59 -0.4 2,151,313 + CA264_09180 0.59 -1.5 2,151,314 - CA264_09180 0.59 +0.2 2,151,314 - CA264_09180 0.59 -0.2 2,151,346 - CA264_09180 0.64 +0.7 2,151,351 + CA264_09180 0.65 -0.2 2,151,352 - CA264_09180 0.65 -1.0 2,151,352 - CA264_09180 0.65 -1.1 2,151,429 + CA264_09180 0.76 -0.0 2,151,430 - CA264_09180 0.77 -0.0 2,151,499 - CA264_09180 0.87 -0.3 2,151,499 - CA264_09180 0.87 -1.1 2,151,576 - -1.2 2,151,581 + -2.3 2,151,593 + -0.6 2,151,594 - -0.2 2,151,594 - +1.1 2,151,624 - +0.0 2,151,627 - -0.2 2,151,765 - -0.3 2,151,767 - -0.4 2,151,776 + +1.2 2,151,810 - -0.2 2,151,882 + -0.8 2,151,894 + -0.1 2,151,900 + -0.7 2,151,901 - +0.5 2,151,992 - CA264_09185 0.11 -0.2 2,152,037 + CA264_09185 0.19 -0.6 2,152,037 + CA264_09185 0.19 +1.0 2,152,063 - CA264_09185 0.24 -0.8 2,152,154 + CA264_09185 0.41 -0.4 2,152,305 + CA264_09185 0.68 -1.1 2,152,306 - CA264_09185 0.69 -2.1 2,152,374 + CA264_09185 0.81 -0.3 2,152,377 - CA264_09185 0.82 +0.0 2,152,456 - +0.8 2,152,485 + -1.0 2,152,485 + +0.1 2,152,486 - -0.4 2,152,487 + -0.1 2,152,488 - -0.9 2,152,550 + CA264_09190 0.23 +0.2
Or see this region's nucleotide sequence