Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07270 and CA264_07275 are separated by 317 nucleotides CA264_07275 and CA264_07280 are separated by 1 nucleotides
CA264_07270: CA264_07270 - hypothetical protein, at 1,679,396 to 1,679,869
_07270
CA264_07275: CA264_07275 - hypothetical protein, at 1,680,187 to 1,680,816
_07275
CA264_07280: CA264_07280 - hypothetical protein, at 1,680,818 to 1,681,663
_07280
Position (kb)
1680
1681 Strain fitness (log2 ratio)
-1
0
1
2 at 1679.197 kb on - strand at 1679.233 kb on - strand at 1679.244 kb on - strand at 1679.245 kb on + strand at 1679.247 kb on + strand at 1679.248 kb on - strand at 1679.248 kb on - strand at 1679.332 kb on - strand at 1679.344 kb on - strand at 1679.348 kb on - strand at 1679.411 kb on + strand at 1679.411 kb on + strand at 1679.437 kb on + strand at 1679.516 kb on - strand, within CA264_07270 at 1679.628 kb on + strand, within CA264_07270 at 1679.628 kb on + strand, within CA264_07270 at 1679.629 kb on - strand, within CA264_07270 at 1679.658 kb on + strand, within CA264_07270 at 1679.686 kb on - strand, within CA264_07270 at 1679.715 kb on + strand, within CA264_07270 at 1679.716 kb on - strand, within CA264_07270 at 1679.716 kb on - strand, within CA264_07270 at 1679.772 kb on - strand, within CA264_07270 at 1679.857 kb on - strand at 1679.887 kb on + strand at 1679.888 kb on - strand at 1679.889 kb on + strand at 1679.890 kb on - strand at 1679.890 kb on - strand at 1679.892 kb on - strand at 1679.892 kb on - strand at 1679.927 kb on + strand at 1679.927 kb on + strand at 1679.929 kb on + strand at 1679.932 kb on + strand at 1679.933 kb on - strand at 1679.933 kb on - strand at 1679.936 kb on + strand at 1679.938 kb on + strand at 1679.939 kb on - strand at 1679.943 kb on + strand at 1679.959 kb on + strand at 1679.961 kb on + strand at 1679.969 kb on - strand at 1679.977 kb on - strand at 1679.977 kb on - strand at 1679.980 kb on + strand at 1679.980 kb on + strand at 1679.980 kb on + strand at 1679.980 kb on + strand at 1679.981 kb on - strand at 1680.010 kb on - strand at 1680.183 kb on + strand at 1680.250 kb on + strand, within CA264_07275 at 1680.309 kb on + strand, within CA264_07275 at 1680.310 kb on - strand, within CA264_07275 at 1680.310 kb on - strand, within CA264_07275 at 1680.376 kb on + strand, within CA264_07275 at 1680.377 kb on - strand, within CA264_07275 at 1680.393 kb on - strand, within CA264_07275 at 1680.440 kb on - strand, within CA264_07275 at 1680.496 kb on - strand, within CA264_07275 at 1680.522 kb on + strand, within CA264_07275 at 1680.537 kb on - strand, within CA264_07275 at 1680.541 kb on + strand, within CA264_07275 at 1680.541 kb on + strand, within CA264_07275 at 1680.541 kb on + strand, within CA264_07275 at 1680.542 kb on - strand, within CA264_07275 at 1680.553 kb on + strand, within CA264_07275 at 1680.553 kb on + strand, within CA264_07275 at 1680.554 kb on - strand, within CA264_07275 at 1680.557 kb on + strand, within CA264_07275 at 1680.557 kb on + strand, within CA264_07275 at 1680.558 kb on - strand, within CA264_07275 at 1680.647 kb on - strand, within CA264_07275 at 1680.681 kb on - strand, within CA264_07275 at 1680.696 kb on + strand, within CA264_07275 at 1680.706 kb on + strand, within CA264_07275 at 1680.727 kb on + strand, within CA264_07275 at 1680.734 kb on + strand, within CA264_07275 at 1680.734 kb on + strand, within CA264_07275 at 1680.774 kb on - strand at 1680.774 kb on - strand at 1680.815 kb on - strand at 1680.815 kb on - strand at 1680.819 kb on + strand at 1680.853 kb on - strand at 1680.904 kb on + strand, within CA264_07280 at 1680.904 kb on + strand, within CA264_07280 at 1680.924 kb on + strand, within CA264_07280 at 1680.924 kb on + strand, within CA264_07280 at 1680.961 kb on - strand, within CA264_07280 at 1680.991 kb on + strand, within CA264_07280 at 1681.027 kb on + strand, within CA264_07280 at 1681.054 kb on - strand, within CA264_07280 at 1681.218 kb on + strand, within CA264_07280 at 1681.218 kb on + strand, within CA264_07280 at 1681.288 kb on + strand, within CA264_07280 at 1681.289 kb on - strand, within CA264_07280 at 1681.296 kb on - strand, within CA264_07280 at 1681.296 kb on - strand, within CA264_07280 at 1681.440 kb on + strand, within CA264_07280 at 1681.441 kb on - strand, within CA264_07280 at 1681.503 kb on + strand, within CA264_07280 at 1681.506 kb on + strand, within CA264_07280 at 1681.529 kb on + strand, within CA264_07280 at 1681.577 kb on + strand, within CA264_07280 at 1681.578 kb on - strand, within CA264_07280 at 1681.594 kb on + strand at 1681.644 kb on + strand at 1681.645 kb on - strand at 1681.655 kb on + strand at 1681.676 kb on + strand at 1681.707 kb on + strand at 1681.708 kb on - strand at 1681.714 kb on - strand at 1681.771 kb on - strand at 1681.772 kb on + strand at 1681.773 kb on - strand at 1681.773 kb on - strand at 1681.780 kb on + strand at 1681.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 1,679,197 - +0.4 1,679,233 - -1.7 1,679,244 - -0.6 1,679,245 + +1.0 1,679,247 + +0.2 1,679,248 - -0.2 1,679,248 - -0.4 1,679,332 - +0.3 1,679,344 - +0.6 1,679,348 - +0.6 1,679,411 + -0.2 1,679,411 + -0.3 1,679,437 + -0.2 1,679,516 - CA264_07270 0.25 -0.2 1,679,628 + CA264_07270 0.49 +0.4 1,679,628 + CA264_07270 0.49 +0.0 1,679,629 - CA264_07270 0.49 +0.0 1,679,658 + CA264_07270 0.55 +0.9 1,679,686 - CA264_07270 0.61 -0.8 1,679,715 + CA264_07270 0.67 +0.4 1,679,716 - CA264_07270 0.68 +1.8 1,679,716 - CA264_07270 0.68 +0.7 1,679,772 - CA264_07270 0.79 +0.1 1,679,857 - -0.4 1,679,887 + -0.4 1,679,888 - -0.3 1,679,889 + +1.0 1,679,890 - +0.1 1,679,890 - -0.0 1,679,892 - +1.9 1,679,892 - -0.8 1,679,927 + -0.5 1,679,927 + -0.2 1,679,929 + -0.8 1,679,932 + -0.0 1,679,933 - +0.1 1,679,933 - +0.2 1,679,936 + +1.1 1,679,938 + -0.3 1,679,939 - +0.6 1,679,943 + +0.3 1,679,959 + +0.5 1,679,961 + -0.1 1,679,969 - -0.8 1,679,977 - -1.4 1,679,977 - -1.2 1,679,980 + +0.0 1,679,980 + +0.1 1,679,980 + +0.2 1,679,980 + +0.1 1,679,981 - +0.6 1,680,010 - -0.2 1,680,183 + -0.2 1,680,250 + CA264_07275 0.10 +0.5 1,680,309 + CA264_07275 0.19 -0.0 1,680,310 - CA264_07275 0.20 +1.1 1,680,310 - CA264_07275 0.20 -0.3 1,680,376 + CA264_07275 0.30 +0.5 1,680,377 - CA264_07275 0.30 -0.0 1,680,393 - CA264_07275 0.33 +0.5 1,680,440 - CA264_07275 0.40 +1.1 1,680,496 - CA264_07275 0.49 -0.8 1,680,522 + CA264_07275 0.53 +0.6 1,680,537 - CA264_07275 0.56 +0.0 1,680,541 + CA264_07275 0.56 +0.5 1,680,541 + CA264_07275 0.56 +0.3 1,680,541 + CA264_07275 0.56 +0.2 1,680,542 - CA264_07275 0.56 -0.8 1,680,553 + CA264_07275 0.58 +0.3 1,680,553 + CA264_07275 0.58 +0.1 1,680,554 - CA264_07275 0.58 +0.4 1,680,557 + CA264_07275 0.59 +1.9 1,680,557 + CA264_07275 0.59 +1.3 1,680,558 - CA264_07275 0.59 -0.0 1,680,647 - CA264_07275 0.73 +0.4 1,680,681 - CA264_07275 0.78 +0.7 1,680,696 + CA264_07275 0.81 -0.2 1,680,706 + CA264_07275 0.82 +0.2 1,680,727 + CA264_07275 0.86 -0.4 1,680,734 + CA264_07275 0.87 +1.3 1,680,734 + CA264_07275 0.87 -0.4 1,680,774 - -0.4 1,680,774 - +1.3 1,680,815 - -0.2 1,680,815 - +0.7 1,680,819 + +0.3 1,680,853 - -0.3 1,680,904 + CA264_07280 0.10 +0.7 1,680,904 + CA264_07280 0.10 -0.4 1,680,924 + CA264_07280 0.13 -1.4 1,680,924 + CA264_07280 0.13 +1.4 1,680,961 - CA264_07280 0.17 -0.1 1,680,991 + CA264_07280 0.20 +0.4 1,681,027 + CA264_07280 0.25 +0.3 1,681,054 - CA264_07280 0.28 +0.3 1,681,218 + CA264_07280 0.47 +1.1 1,681,218 + CA264_07280 0.47 +0.1 1,681,288 + CA264_07280 0.56 +1.0 1,681,289 - CA264_07280 0.56 -0.2 1,681,296 - CA264_07280 0.57 -0.1 1,681,296 - CA264_07280 0.57 -0.4 1,681,440 + CA264_07280 0.74 -0.3 1,681,441 - CA264_07280 0.74 -1.0 1,681,503 + CA264_07280 0.81 +0.1 1,681,506 + CA264_07280 0.81 +0.8 1,681,529 + CA264_07280 0.84 +0.7 1,681,577 + CA264_07280 0.90 -0.2 1,681,578 - CA264_07280 0.90 +0.2 1,681,594 + +0.8 1,681,644 + +0.8 1,681,645 - -1.2 1,681,655 + +0.7 1,681,676 + -0.0 1,681,707 + +0.1 1,681,708 - +0.1 1,681,714 - +0.6 1,681,771 - -0.0 1,681,772 + -1.5 1,681,773 - +0.4 1,681,773 - -0.3 1,681,780 + -0.4 1,681,786 - -0.1
Or see this region's nucleotide sequence