Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04920 and CA264_04925 are separated by 333 nucleotides CA264_04925 and CA264_04930 are separated by 183 nucleotides
CA264_04920: CA264_04920 - tyrosine--tRNA ligase, at 1,141,069 to 1,142,373
_04920
CA264_04925: CA264_04925 - hypothetical protein, at 1,142,707 to 1,143,771
_04925
CA264_04930: CA264_04930 - DNA polymerase III subunit delta, at 1,143,955 to 1,145,001
_04930
Position (kb)
1142
1143
1144 Strain fitness (log2 ratio)
-1
0
1
2 at 1142.404 kb on - strand at 1142.471 kb on - strand at 1142.471 kb on - strand at 1142.472 kb on + strand at 1142.511 kb on + strand at 1142.511 kb on + strand at 1142.512 kb on - strand at 1142.576 kb on + strand at 1142.576 kb on + strand at 1142.579 kb on - strand at 1142.633 kb on - strand at 1142.708 kb on + strand at 1142.708 kb on + strand at 1142.709 kb on - strand at 1142.710 kb on + strand at 1142.710 kb on + strand at 1142.711 kb on - strand at 1142.720 kb on - strand at 1142.720 kb on - strand at 1142.793 kb on - strand at 1142.803 kb on + strand at 1142.803 kb on + strand at 1143.006 kb on - strand, within CA264_04925 at 1143.006 kb on - strand, within CA264_04925 at 1143.023 kb on + strand, within CA264_04925 at 1143.024 kb on - strand, within CA264_04925 at 1143.158 kb on + strand, within CA264_04925 at 1143.158 kb on + strand, within CA264_04925 at 1143.161 kb on + strand, within CA264_04925 at 1143.162 kb on - strand, within CA264_04925 at 1143.192 kb on - strand, within CA264_04925 at 1143.211 kb on - strand, within CA264_04925 at 1143.261 kb on + strand, within CA264_04925 at 1143.433 kb on + strand, within CA264_04925 at 1143.487 kb on + strand, within CA264_04925 at 1143.531 kb on + strand, within CA264_04925 at 1143.542 kb on - strand, within CA264_04925 at 1143.542 kb on - strand, within CA264_04925 at 1143.588 kb on + strand, within CA264_04925 at 1143.628 kb on + strand, within CA264_04925 at 1143.641 kb on + strand, within CA264_04925 at 1143.641 kb on + strand, within CA264_04925 at 1143.641 kb on + strand, within CA264_04925 at 1143.642 kb on - strand, within CA264_04925 at 1143.642 kb on - strand, within CA264_04925 at 1143.733 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 1,142,404 - -0.8 1,142,471 - -0.1 1,142,471 - -0.4 1,142,472 + -0.4 1,142,511 + -0.8 1,142,511 + -1.6 1,142,512 - +2.4 1,142,576 + -0.4 1,142,576 + -0.6 1,142,579 - -0.1 1,142,633 - +0.1 1,142,708 + -0.4 1,142,708 + -0.9 1,142,709 - -0.4 1,142,710 + +0.2 1,142,710 + -0.4 1,142,711 - -1.6 1,142,720 - -0.4 1,142,720 - +0.0 1,142,793 - +0.3 1,142,803 + +0.3 1,142,803 + +0.3 1,143,006 - CA264_04925 0.28 +0.2 1,143,006 - CA264_04925 0.28 +0.8 1,143,023 + CA264_04925 0.30 +0.2 1,143,024 - CA264_04925 0.30 -1.1 1,143,158 + CA264_04925 0.42 -0.1 1,143,158 + CA264_04925 0.42 -0.0 1,143,161 + CA264_04925 0.43 -0.2 1,143,162 - CA264_04925 0.43 -0.4 1,143,192 - CA264_04925 0.46 -1.0 1,143,211 - CA264_04925 0.47 -0.3 1,143,261 + CA264_04925 0.52 -1.7 1,143,433 + CA264_04925 0.68 -0.3 1,143,487 + CA264_04925 0.73 +1.4 1,143,531 + CA264_04925 0.77 +0.1 1,143,542 - CA264_04925 0.78 +0.2 1,143,542 - CA264_04925 0.78 -1.1 1,143,588 + CA264_04925 0.83 +1.2 1,143,628 + CA264_04925 0.86 -1.2 1,143,641 + CA264_04925 0.88 -0.2 1,143,641 + CA264_04925 0.88 -1.0 1,143,641 + CA264_04925 0.88 +0.1 1,143,642 - CA264_04925 0.88 -0.8 1,143,642 - CA264_04925 0.88 +1.1 1,143,733 + +0.1 1,143,779 + -0.2 1,143,779 + -0.2 1,143,779 + -0.1 1,143,779 + -0.1 1,143,779 + -0.6
Or see this region's nucleotide sequence