Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04715 and CA264_04720 are separated by 78 nucleotides CA264_04720 and CA264_04725 are separated by 130 nucleotides CA264_04725 and CA264_04730 are separated by 100 nucleotides CA264_04730 and CA264_04735 are separated by 96 nucleotides
CA264_04715: CA264_04715 - 3-deoxy-8-phosphooctulonate synthase, at 1,092,540 to 1,093,349
_04715
CA264_04720: CA264_04720 - SAM-dependent methyltransferase, at 1,093,428 to 1,094,171
_04720
CA264_04725: CA264_04725 - Co2+/Mg2+ efflux protein ApaG, at 1,094,302 to 1,094,688
_04725
CA264_04730: CA264_04730 - uracil-DNA glycosylase, at 1,094,789 to 1,095,451
_04730
CA264_04735: CA264_04735 - hypothetical protein, at 1,095,548 to 1,097,092
_04735
Position (kb)
1094
1095 Strain fitness (log2 ratio)
-2
-1
0
1 at 1093.366 kb on + strand at 1093.367 kb on - strand at 1093.369 kb on - strand at 1093.401 kb on + strand at 1093.402 kb on - strand at 1093.403 kb on + strand at 1093.403 kb on + strand at 1093.408 kb on + strand at 1093.430 kb on - strand at 1093.433 kb on - strand at 1094.202 kb on + strand at 1094.219 kb on + strand at 1094.286 kb on + strand at 1094.286 kb on + strand at 1094.286 kb on + strand at 1094.290 kb on - strand at 1094.290 kb on - strand at 1094.292 kb on + strand at 1094.292 kb on + strand at 1094.303 kb on + strand at 1094.315 kb on + strand at 1094.316 kb on - strand at 1094.387 kb on + strand, within CA264_04725 at 1094.388 kb on - strand, within CA264_04725 at 1094.438 kb on + strand, within CA264_04725 at 1094.527 kb on + strand, within CA264_04725 at 1094.527 kb on + strand, within CA264_04725 at 1094.527 kb on + strand, within CA264_04725 at 1094.527 kb on + strand, within CA264_04725 at 1094.528 kb on - strand, within CA264_04725 at 1094.531 kb on + strand, within CA264_04725 at 1094.532 kb on - strand, within CA264_04725 at 1094.590 kb on - strand, within CA264_04725 at 1094.590 kb on - strand, within CA264_04725 at 1094.639 kb on + strand, within CA264_04725 at 1094.705 kb on + strand at 1094.711 kb on + strand at 1094.712 kb on - strand at 1094.712 kb on - strand at 1094.712 kb on - strand at 1094.780 kb on - strand at 1094.797 kb on - strand at 1094.802 kb on + strand at 1094.849 kb on + strand at 1094.862 kb on + strand, within CA264_04730 at 1094.885 kb on + strand, within CA264_04730 at 1094.886 kb on - strand, within CA264_04730 at 1094.887 kb on + strand, within CA264_04730 at 1094.887 kb on + strand, within CA264_04730 at 1094.888 kb on - strand, within CA264_04730 at 1094.888 kb on - strand, within CA264_04730 at 1094.970 kb on + strand, within CA264_04730 at 1095.043 kb on + strand, within CA264_04730 at 1095.043 kb on + strand, within CA264_04730 at 1095.064 kb on + strand, within CA264_04730 at 1095.079 kb on + strand, within CA264_04730 at 1095.080 kb on - strand, within CA264_04730 at 1095.080 kb on - strand, within CA264_04730 at 1095.288 kb on - strand, within CA264_04730 at 1095.414 kb on - strand at 1095.414 kb on - strand at 1095.414 kb on - strand at 1095.417 kb on + strand at 1095.512 kb on + strand at 1095.518 kb on + strand at 1095.519 kb on - strand at 1095.521 kb on - strand at 1095.538 kb on + strand at 1095.540 kb on + strand at 1095.540 kb on + strand at 1095.652 kb on + strand at 1095.652 kb on + strand at 1095.653 kb on - strand at 1095.653 kb on - strand at 1095.653 kb on - strand at 1095.655 kb on - strand at 1095.671 kb on + strand at 1095.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 1,093,366 + -0.6 1,093,367 - -0.8 1,093,369 - +0.2 1,093,401 + -1.0 1,093,402 - -0.2 1,093,403 + -0.8 1,093,403 + -0.4 1,093,408 + +0.1 1,093,430 - -0.3 1,093,433 - -0.9 1,094,202 + +0.5 1,094,219 + +0.3 1,094,286 + -0.0 1,094,286 + -0.3 1,094,286 + +0.0 1,094,290 - -0.6 1,094,290 - +0.0 1,094,292 + -0.0 1,094,292 + -0.1 1,094,303 + -0.0 1,094,315 + +0.2 1,094,316 - -0.1 1,094,387 + CA264_04725 0.22 +0.1 1,094,388 - CA264_04725 0.22 -0.4 1,094,438 + CA264_04725 0.35 +0.3 1,094,527 + CA264_04725 0.58 -0.8 1,094,527 + CA264_04725 0.58 +0.2 1,094,527 + CA264_04725 0.58 -2.2 1,094,527 + CA264_04725 0.58 -2.4 1,094,528 - CA264_04725 0.58 +1.2 1,094,531 + CA264_04725 0.59 +0.6 1,094,532 - CA264_04725 0.59 +0.0 1,094,590 - CA264_04725 0.74 +0.1 1,094,590 - CA264_04725 0.74 -0.5 1,094,639 + CA264_04725 0.87 +0.3 1,094,705 + -0.0 1,094,711 + -0.9 1,094,712 - +1.0 1,094,712 - -0.3 1,094,712 - -1.0 1,094,780 - -0.6 1,094,797 - +0.6 1,094,802 + -0.5 1,094,849 + -0.3 1,094,862 + CA264_04730 0.11 +1.0 1,094,885 + CA264_04730 0.14 -0.7 1,094,886 - CA264_04730 0.15 +0.3 1,094,887 + CA264_04730 0.15 -0.4 1,094,887 + CA264_04730 0.15 +0.5 1,094,888 - CA264_04730 0.15 -2.0 1,094,888 - CA264_04730 0.15 +0.3 1,094,970 + CA264_04730 0.27 -0.5 1,095,043 + CA264_04730 0.38 -0.5 1,095,043 + CA264_04730 0.38 -0.9 1,095,064 + CA264_04730 0.41 +0.7 1,095,079 + CA264_04730 0.44 +0.6 1,095,080 - CA264_04730 0.44 -1.8 1,095,080 - CA264_04730 0.44 +0.3 1,095,288 - CA264_04730 0.75 +0.4 1,095,414 - +0.3 1,095,414 - -0.3 1,095,414 - +0.1 1,095,417 + -0.2 1,095,512 + -1.2 1,095,518 + -0.3 1,095,519 - -0.1 1,095,521 - -0.6 1,095,538 + -0.2 1,095,540 + +1.2 1,095,540 + +0.2 1,095,652 + -1.0 1,095,652 + +0.2 1,095,653 - +0.5 1,095,653 - -1.3 1,095,653 - +0.3 1,095,655 - -0.7 1,095,671 + +1.2 1,095,672 - -1.0
Or see this region's nucleotide sequence