Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01890 and CA264_01895 are separated by 170 nucleotides CA264_01895 and CA264_01900 are separated by 435 nucleotides CA264_01900 and CA264_01905 are separated by 470 nucleotides
CA264_01890: CA264_01890 - hypothetical protein, at 441,226 to 441,681
_01890
CA264_01895: CA264_01895 - hypothetical protein, at 441,852 to 442,154
_01895
CA264_01900: CA264_01900 - hypothetical protein, at 442,590 to 443,381
_01900
CA264_01905: CA264_01905 - cystathionine beta-synthase, at 443,852 to 445,696
_01905
Position (kb) 442
443
444 Strain fitness (log2 ratio) -1
0
1
2 at 441.607 kb on + strand, within CA264_01890 at 441.743 kb on - strand at 441.754 kb on - strand at 441.775 kb on + strand at 441.776 kb on - strand at 441.840 kb on - strand at 441.840 kb on - strand at 441.864 kb on - strand at 441.876 kb on + strand at 441.880 kb on - strand at 441.930 kb on + strand, within CA264_01895 at 441.930 kb on + strand, within CA264_01895 at 441.930 kb on + strand, within CA264_01895 at 441.930 kb on + strand, within CA264_01895 at 441.931 kb on - strand, within CA264_01895 at 441.993 kb on + strand, within CA264_01895 at 441.993 kb on + strand, within CA264_01895 at 441.994 kb on - strand, within CA264_01895 at 441.994 kb on - strand, within CA264_01895 at 441.994 kb on - strand, within CA264_01895 at 441.997 kb on + strand, within CA264_01895 at 441.997 kb on + strand, within CA264_01895 at 441.998 kb on - strand, within CA264_01895 at 441.998 kb on - strand, within CA264_01895 at 442.020 kb on + strand, within CA264_01895 at 442.022 kb on + strand, within CA264_01895 at 442.023 kb on - strand, within CA264_01895 at 442.023 kb on - strand, within CA264_01895 at 442.023 kb on - strand, within CA264_01895 at 442.056 kb on - strand, within CA264_01895 at 442.072 kb on + strand, within CA264_01895 at 442.072 kb on + strand, within CA264_01895 at 442.073 kb on - strand, within CA264_01895 at 442.073 kb on - strand, within CA264_01895 at 442.166 kb on + strand at 442.204 kb on + strand at 442.257 kb on - strand at 442.284 kb on - strand at 442.400 kb on - strand at 442.413 kb on - strand at 442.413 kb on - strand at 442.420 kb on + strand at 442.421 kb on - strand at 442.515 kb on + strand at 442.519 kb on - strand at 442.519 kb on - strand at 442.522 kb on + strand at 442.567 kb on - strand at 442.578 kb on - strand at 442.583 kb on + strand at 442.583 kb on + strand at 442.584 kb on - strand at 442.590 kb on - strand at 442.590 kb on - strand at 442.599 kb on - strand at 442.603 kb on + strand at 442.604 kb on - strand at 442.604 kb on - strand at 442.604 kb on - strand at 442.606 kb on + strand at 442.606 kb on + strand at 442.607 kb on - strand at 442.645 kb on + strand at 442.654 kb on + strand at 442.655 kb on - strand at 442.658 kb on + strand at 442.689 kb on - strand, within CA264_01900 at 442.742 kb on + strand, within CA264_01900 at 442.743 kb on - strand, within CA264_01900 at 442.743 kb on - strand, within CA264_01900 at 442.744 kb on + strand, within CA264_01900 at 442.745 kb on - strand, within CA264_01900 at 442.745 kb on - strand, within CA264_01900 at 442.748 kb on + strand, within CA264_01900 at 442.748 kb on + strand, within CA264_01900 at 442.749 kb on - strand, within CA264_01900 at 442.803 kb on + strand, within CA264_01900 at 442.821 kb on - strand, within CA264_01900 at 442.871 kb on + strand, within CA264_01900 at 442.872 kb on - strand, within CA264_01900 at 443.061 kb on - strand, within CA264_01900 at 443.062 kb on + strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.141 kb on + strand, within CA264_01900 at 443.242 kb on + strand, within CA264_01900 at 443.261 kb on - strand, within CA264_01900 at 443.324 kb on - strand at 443.377 kb on + strand at 443.377 kb on + strand at 443.443 kb on + strand at 443.444 kb on - strand at 443.473 kb on - strand at 443.536 kb on - strand at 443.542 kb on - strand at 443.542 kb on - strand at 443.581 kb on + strand at 443.582 kb on - strand at 443.619 kb on + strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.631 kb on + strand at 443.656 kb on + strand at 443.665 kb on - strand at 443.668 kb on + strand at 443.668 kb on + strand at 443.669 kb on - strand at 443.669 kb on - strand at 443.679 kb on - strand at 443.709 kb on + strand at 443.710 kb on - strand at 443.821 kb on + strand at 443.848 kb on + strand at 443.852 kb on - strand at 443.852 kb on - strand at 443.941 kb on + strand at 444.053 kb on + strand, within CA264_01905 at 444.055 kb on + strand, within CA264_01905 at 444.064 kb on - strand, within CA264_01905 at 444.191 kb on - strand, within CA264_01905 at 444.218 kb on - strand, within CA264_01905 at 444.267 kb on - strand, within CA264_01905 at 444.267 kb on - strand, within CA264_01905 at 444.314 kb on - strand, within CA264_01905 at 444.361 kb on - strand, within CA264_01905
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 441,607 + CA264_01890 0.84 -0.1 441,743 - -1.1 441,754 - +0.2 441,775 + +0.1 441,776 - -0.3 441,840 - +1.5 441,840 - +0.0 441,864 - +0.8 441,876 + +0.3 441,880 - -0.3 441,930 + CA264_01895 0.26 -0.8 441,930 + CA264_01895 0.26 -0.1 441,930 + CA264_01895 0.26 -0.1 441,930 + CA264_01895 0.26 +0.2 441,931 - CA264_01895 0.26 +0.1 441,993 + CA264_01895 0.47 +0.3 441,993 + CA264_01895 0.47 +0.2 441,994 - CA264_01895 0.47 -0.5 441,994 - CA264_01895 0.47 -0.4 441,994 - CA264_01895 0.47 +0.5 441,997 + CA264_01895 0.48 +0.3 441,997 + CA264_01895 0.48 -0.2 441,998 - CA264_01895 0.48 +0.9 441,998 - CA264_01895 0.48 -0.4 442,020 + CA264_01895 0.55 -0.8 442,022 + CA264_01895 0.56 -0.3 442,023 - CA264_01895 0.56 +0.6 442,023 - CA264_01895 0.56 -1.3 442,023 - CA264_01895 0.56 +0.3 442,056 - CA264_01895 0.67 +0.5 442,072 + CA264_01895 0.73 +0.2 442,072 + CA264_01895 0.73 -0.2 442,073 - CA264_01895 0.73 -0.4 442,073 - CA264_01895 0.73 +0.9 442,166 + -1.3 442,204 + -0.3 442,257 - -0.1 442,284 - -1.4 442,400 - -0.5 442,413 - -0.0 442,413 - -0.1 442,420 + -1.4 442,421 - +0.7 442,515 + -1.0 442,519 - +1.2 442,519 - -0.3 442,522 + +0.1 442,567 - +0.1 442,578 - +1.1 442,583 + -0.4 442,583 + -0.8 442,584 - -0.4 442,590 - -0.8 442,590 - -0.3 442,599 - -0.8 442,603 + +1.2 442,604 - -1.2 442,604 - -0.3 442,604 - +2.3 442,606 + -0.5 442,606 + +0.1 442,607 - -0.7 442,645 + -0.9 442,654 + -0.6 442,655 - +0.2 442,658 + +1.5 442,689 - CA264_01900 0.12 +0.2 442,742 + CA264_01900 0.19 -0.1 442,743 - CA264_01900 0.19 +1.5 442,743 - CA264_01900 0.19 -0.9 442,744 + CA264_01900 0.19 +0.6 442,745 - CA264_01900 0.20 +0.4 442,745 - CA264_01900 0.20 -0.5 442,748 + CA264_01900 0.20 +0.1 442,748 + CA264_01900 0.20 -0.9 442,749 - CA264_01900 0.20 +1.9 442,803 + CA264_01900 0.27 +0.9 442,821 - CA264_01900 0.29 -0.2 442,871 + CA264_01900 0.35 +1.5 442,872 - CA264_01900 0.36 -0.0 443,061 - CA264_01900 0.59 -0.4 443,062 + CA264_01900 0.60 +1.2 443,063 - CA264_01900 0.60 -0.5 443,063 - CA264_01900 0.60 -0.0 443,141 + CA264_01900 0.70 -0.4 443,242 + CA264_01900 0.82 -0.0 443,261 - CA264_01900 0.85 +0.5 443,324 - +0.5 443,377 + -0.3 443,377 + -0.4 443,443 + -0.8 443,444 - -0.2 443,473 - +0.0 443,536 - +0.6 443,542 - +0.3 443,542 - -0.3 443,581 + -1.1 443,582 - -0.1 443,619 + -1.4 443,620 - +0.7 443,620 - +0.1 443,620 - +0.2 443,620 - +0.9 443,631 + -0.5 443,656 + -0.8 443,665 - +0.5 443,668 + -0.7 443,668 + -1.2 443,669 - +1.1 443,669 - +0.1 443,679 - +0.9 443,709 + +0.2 443,710 - -0.3 443,821 + +0.9 443,848 + -0.1 443,852 - -0.2 443,852 - -0.3 443,941 + -1.1 444,053 + CA264_01905 0.11 -1.5 444,055 + CA264_01905 0.11 -0.1 444,064 - CA264_01905 0.11 -0.0 444,191 - CA264_01905 0.18 -0.3 444,218 - CA264_01905 0.20 -0.7 444,267 - CA264_01905 0.22 -1.7 444,267 - CA264_01905 0.22 +1.9 444,314 - CA264_01905 0.25 -0.7 444,361 - CA264_01905 0.28 -0.2
Or see this region's nucleotide sequence