Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01505 and CA264_01510 are separated by 46 nucleotides CA264_01510 and CA264_01515 are separated by 53 nucleotides CA264_01515 and CA264_01520 are separated by 272 nucleotides
CA264_01505: CA264_01505 - hypothetical protein, at 356,261 to 356,800
_01505
CA264_01510: CA264_01510 - hypothetical protein, at 356,847 to 357,368
_01510
CA264_01515: CA264_01515 - hypothetical protein, at 357,422 to 358,621
_01515
CA264_01520: CA264_01520 - adenylosuccinate lyase, at 358,894 to 360,246
_01520
Position (kb) 357
358
359 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 356.656 kb on + strand, within CA264_01505 at 356.786 kb on + strand at 356.786 kb on + strand at 356.786 kb on + strand at 356.787 kb on - strand at 356.825 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.827 kb on + strand at 356.933 kb on - strand, within CA264_01510 at 356.985 kb on + strand, within CA264_01510 at 356.986 kb on - strand, within CA264_01510 at 357.054 kb on + strand, within CA264_01510 at 357.080 kb on - strand, within CA264_01510 at 357.084 kb on - strand, within CA264_01510 at 357.084 kb on - strand, within CA264_01510 at 357.160 kb on + strand, within CA264_01510 at 357.161 kb on - strand, within CA264_01510 at 357.161 kb on - strand, within CA264_01510 at 357.231 kb on - strand, within CA264_01510 at 357.283 kb on - strand, within CA264_01510 at 357.297 kb on - strand, within CA264_01510 at 357.383 kb on - strand at 357.407 kb on - strand at 357.407 kb on - strand at 357.424 kb on - strand at 357.437 kb on - strand at 357.511 kb on + strand at 357.643 kb on - strand, within CA264_01515 at 357.667 kb on + strand, within CA264_01515 at 357.667 kb on + strand, within CA264_01515 at 357.671 kb on + strand, within CA264_01515 at 357.672 kb on - strand, within CA264_01515 at 357.678 kb on - strand, within CA264_01515 at 357.678 kb on - strand, within CA264_01515 at 357.703 kb on - strand, within CA264_01515 at 357.706 kb on + strand, within CA264_01515 at 357.706 kb on + strand, within CA264_01515 at 357.707 kb on - strand, within CA264_01515 at 357.889 kb on + strand, within CA264_01515 at 357.889 kb on + strand, within CA264_01515 at 357.944 kb on + strand, within CA264_01515 at 357.975 kb on + strand, within CA264_01515 at 357.975 kb on + strand, within CA264_01515 at 358.030 kb on + strand, within CA264_01515 at 358.153 kb on + strand, within CA264_01515 at 358.154 kb on - strand, within CA264_01515 at 358.202 kb on - strand, within CA264_01515 at 358.319 kb on - strand, within CA264_01515 at 358.441 kb on + strand, within CA264_01515 at 358.441 kb on + strand, within CA264_01515 at 358.442 kb on - strand, within CA264_01515 at 358.463 kb on + strand, within CA264_01515 at 358.463 kb on + strand, within CA264_01515 at 358.463 kb on + strand, within CA264_01515 at 358.464 kb on - strand, within CA264_01515 at 358.483 kb on + strand, within CA264_01515 at 358.490 kb on - strand, within CA264_01515 at 358.607 kb on - strand at 358.640 kb on + strand at 358.694 kb on + strand at 358.694 kb on + strand at 358.695 kb on - strand at 358.702 kb on - strand at 358.796 kb on + strand at 358.864 kb on + strand at 358.867 kb on - strand at 358.879 kb on - strand at 358.892 kb on - strand at 358.895 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 356,656 + CA264_01505 0.73 +3.5 356,786 + -0.3 356,786 + +0.6 356,786 + +1.0 356,787 - +0.6 356,825 + -1.1 356,827 + +0.2 356,827 + +0.7 356,827 + -1.0 356,827 + -0.3 356,933 - CA264_01510 0.16 -1.7 356,985 + CA264_01510 0.26 -0.8 356,986 - CA264_01510 0.27 -0.7 357,054 + CA264_01510 0.40 -0.2 357,080 - CA264_01510 0.45 +0.1 357,084 - CA264_01510 0.45 +0.5 357,084 - CA264_01510 0.45 +0.4 357,160 + CA264_01510 0.60 +0.3 357,161 - CA264_01510 0.60 -1.1 357,161 - CA264_01510 0.60 -0.6 357,231 - CA264_01510 0.74 +0.4 357,283 - CA264_01510 0.84 -0.8 357,297 - CA264_01510 0.86 +0.3 357,383 - +0.4 357,407 - +0.1 357,407 - -0.2 357,424 - -0.3 357,437 - -0.9 357,511 + -0.3 357,643 - CA264_01515 0.18 +2.0 357,667 + CA264_01515 0.20 +0.5 357,667 + CA264_01515 0.20 +0.1 357,671 + CA264_01515 0.21 +0.4 357,672 - CA264_01515 0.21 -0.9 357,678 - CA264_01515 0.21 -0.1 357,678 - CA264_01515 0.21 -0.5 357,703 - CA264_01515 0.23 +0.9 357,706 + CA264_01515 0.24 +0.3 357,706 + CA264_01515 0.24 -0.7 357,707 - CA264_01515 0.24 +0.0 357,889 + CA264_01515 0.39 -0.1 357,889 + CA264_01515 0.39 -0.5 357,944 + CA264_01515 0.43 -0.2 357,975 + CA264_01515 0.46 -0.1 357,975 + CA264_01515 0.46 +0.9 358,030 + CA264_01515 0.51 -0.1 358,153 + CA264_01515 0.61 -0.3 358,154 - CA264_01515 0.61 -2.1 358,202 - CA264_01515 0.65 +0.3 358,319 - CA264_01515 0.75 +0.2 358,441 + CA264_01515 0.85 -0.5 358,441 + CA264_01515 0.85 -0.1 358,442 - CA264_01515 0.85 -0.1 358,463 + CA264_01515 0.87 -0.2 358,463 + CA264_01515 0.87 +0.3 358,463 + CA264_01515 0.87 +0.8 358,464 - CA264_01515 0.87 +0.9 358,483 + CA264_01515 0.88 -0.8 358,490 - CA264_01515 0.89 +0.6 358,607 - -0.3 358,640 + +0.7 358,694 + -0.1 358,694 + -0.4 358,695 - +1.3 358,702 - +0.1 358,796 + +0.9 358,864 + -0.4 358,867 - +1.3 358,879 - +0.0 358,892 - -0.8 358,895 + -0.3
Or see this region's nucleotide sequence