Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01390 and CA264_01395 are separated by 0 nucleotides CA264_01395 and CA264_01400 are separated by 73 nucleotides CA264_01400 and CA264_01405 are separated by 401 nucleotides
CA264_01390: CA264_01390 - iron ABC transporter permease, at 331,869 to 332,876
_01390
CA264_01395: CA264_01395 - 6-carboxytetrahydropterin synthase QueD, at 332,877 to 333,299
_01395
CA264_01400: CA264_01400 - lipid-A-disaccharide synthase, at 333,373 to 334,494
_01400
CA264_01405: CA264_01405 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 334,896 to 336,119
_01405
Position (kb) 333
334
335 Strain fitness (log2 ratio) -2
-1
0
1
2 at 332.527 kb on + strand, within CA264_01390 at 332.527 kb on + strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.660 kb on + strand, within CA264_01390 at 332.741 kb on + strand, within CA264_01390 at 332.807 kb on - strand at 332.836 kb on + strand at 332.874 kb on + strand at 332.954 kb on + strand, within CA264_01395 at 333.003 kb on + strand, within CA264_01395 at 333.004 kb on - strand, within CA264_01395 at 333.116 kb on + strand, within CA264_01395 at 333.259 kb on - strand at 333.281 kb on - strand at 333.285 kb on + strand at 333.298 kb on - strand at 333.321 kb on + strand at 333.334 kb on + strand at 333.344 kb on + strand at 334.490 kb on + strand at 334.490 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.578 kb on - strand at 334.604 kb on + strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.710 kb on + strand at 334.776 kb on - strand at 334.776 kb on - strand at 334.795 kb on - strand at 334.799 kb on + strand at 334.849 kb on - strand at 334.855 kb on + strand at 334.856 kb on - strand at 334.918 kb on - strand at 334.949 kb on - strand at 334.962 kb on - strand at 335.031 kb on - strand, within CA264_01405 at 335.142 kb on - strand, within CA264_01405 at 335.144 kb on - strand, within CA264_01405 at 335.328 kb on - strand, within CA264_01405 at 335.479 kb on - strand, within CA264_01405
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 332,527 + CA264_01390 0.65 +1.8 332,527 + CA264_01390 0.65 -1.0 332,528 - CA264_01390 0.65 +0.5 332,528 - CA264_01390 0.65 +0.3 332,660 + CA264_01390 0.78 +0.9 332,741 + CA264_01390 0.87 +0.8 332,807 - +0.6 332,836 + -1.2 332,874 + -0.3 332,954 + CA264_01395 0.18 -1.3 333,003 + CA264_01395 0.30 -0.1 333,004 - CA264_01395 0.30 +0.1 333,116 + CA264_01395 0.57 +0.1 333,259 - -0.0 333,281 - -0.0 333,285 + -0.2 333,298 - +0.5 333,321 + -0.8 333,334 + -1.2 333,344 + +0.9 334,490 + -0.1 334,490 + +0.1 334,492 + -0.1 334,492 + +0.3 334,492 + -0.3 334,578 - -0.3 334,604 + +0.2 334,708 - +0.5 334,708 - +0.7 334,708 - +0.9 334,710 + +0.2 334,776 - -0.5 334,776 - -0.0 334,795 - +1.0 334,799 + -0.8 334,849 - -1.8 334,855 + -1.3 334,856 - -0.5 334,918 - +1.5 334,949 - -0.5 334,962 - -1.7 335,031 - CA264_01405 0.11 -0.9 335,142 - CA264_01405 0.20 -2.1 335,144 - CA264_01405 0.20 -1.8 335,328 - CA264_01405 0.35 +0.1 335,479 - CA264_01405 0.48 -0.7
Or see this region's nucleotide sequence