Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00745 and CA264_00750 are separated by 122 nucleotides CA264_00750 and CA264_00755 are separated by 291 nucleotides CA264_00755 and CA264_00760 are separated by 234 nucleotides
CA264_00745: CA264_00745 - ribonuclease III, at 160,148 to 160,888
_00745
CA264_00750: CA264_00750 - hypothetical protein, at 161,011 to 161,379
_00750
CA264_00755: CA264_00755 - SAM-dependent methyltransferase, at 161,671 to 162,927
_00755
CA264_00760: CA264_00760 - NAD(+) synthase, at 163,162 to 165,048
_00760
Position (kb) 161
162
163 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 160.748 kb on - strand, within CA264_00745 at 160.786 kb on - strand, within CA264_00745 at 160.787 kb on + strand, within CA264_00745 at 160.787 kb on + strand, within CA264_00745 at 160.788 kb on - strand, within CA264_00745 at 160.818 kb on + strand at 160.818 kb on + strand at 160.882 kb on + strand at 160.883 kb on - strand at 160.898 kb on + strand at 160.911 kb on - strand at 160.934 kb on - strand at 160.987 kb on + strand at 160.999 kb on + strand at 160.999 kb on + strand at 161.000 kb on - strand at 161.003 kb on + strand at 161.041 kb on + strand at 161.043 kb on + strand at 161.067 kb on - strand, within CA264_00750 at 161.067 kb on - strand, within CA264_00750 at 161.067 kb on - strand, within CA264_00750 at 161.076 kb on - strand, within CA264_00750 at 161.109 kb on - strand, within CA264_00750 at 161.147 kb on + strand, within CA264_00750 at 161.179 kb on + strand, within CA264_00750 at 161.244 kb on + strand, within CA264_00750 at 161.246 kb on + strand, within CA264_00750 at 161.246 kb on + strand, within CA264_00750 at 161.246 kb on + strand, within CA264_00750 at 161.247 kb on - strand, within CA264_00750 at 161.247 kb on - strand, within CA264_00750 at 161.247 kb on - strand, within CA264_00750 at 161.250 kb on + strand, within CA264_00750 at 161.250 kb on + strand, within CA264_00750 at 161.251 kb on - strand, within CA264_00750 at 161.251 kb on - strand, within CA264_00750 at 161.253 kb on - strand, within CA264_00750 at 161.253 kb on - strand, within CA264_00750 at 161.303 kb on + strand, within CA264_00750 at 161.303 kb on + strand, within CA264_00750 at 161.303 kb on + strand, within CA264_00750 at 161.304 kb on - strand, within CA264_00750 at 161.304 kb on - strand, within CA264_00750 at 161.313 kb on - strand, within CA264_00750 at 161.333 kb on - strand, within CA264_00750 at 161.347 kb on - strand at 161.347 kb on - strand at 161.507 kb on + strand at 161.508 kb on - strand at 161.553 kb on + strand at 161.597 kb on + strand at 161.597 kb on + strand at 161.598 kb on - strand at 161.622 kb on - strand at 161.648 kb on - strand at 161.670 kb on + strand at 161.671 kb on - strand at 161.750 kb on + strand at 161.755 kb on + strand at 161.755 kb on + strand at 161.756 kb on - strand at 161.812 kb on - strand, within CA264_00755 at 161.831 kb on + strand, within CA264_00755 at 161.840 kb on - strand, within CA264_00755 at 161.862 kb on + strand, within CA264_00755 at 161.872 kb on + strand, within CA264_00755 at 161.872 kb on + strand, within CA264_00755 at 161.872 kb on + strand, within CA264_00755 at 161.873 kb on - strand, within CA264_00755 at 161.873 kb on - strand, within CA264_00755 at 161.873 kb on - strand, within CA264_00755 at 161.878 kb on + strand, within CA264_00755 at 161.935 kb on - strand, within CA264_00755 at 161.954 kb on - strand, within CA264_00755 at 162.093 kb on + strand, within CA264_00755 at 162.135 kb on - strand, within CA264_00755 at 162.135 kb on - strand, within CA264_00755 at 162.135 kb on - strand, within CA264_00755 at 162.138 kb on + strand, within CA264_00755 at 162.138 kb on + strand, within CA264_00755 at 162.139 kb on - strand, within CA264_00755 at 162.140 kb on + strand, within CA264_00755 at 162.285 kb on - strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.311 kb on - strand, within CA264_00755 at 162.311 kb on - strand, within CA264_00755 at 162.328 kb on + strand, within CA264_00755 at 162.329 kb on - strand, within CA264_00755 at 162.348 kb on + strand, within CA264_00755 at 162.390 kb on - strand, within CA264_00755 at 162.462 kb on - strand, within CA264_00755 at 162.462 kb on - strand, within CA264_00755 at 162.524 kb on - strand, within CA264_00755 at 162.524 kb on - strand, within CA264_00755 at 162.555 kb on + strand, within CA264_00755 at 162.555 kb on + strand, within CA264_00755 at 162.556 kb on - strand, within CA264_00755 at 162.558 kb on + strand, within CA264_00755 at 162.559 kb on - strand, within CA264_00755 at 162.562 kb on + strand, within CA264_00755 at 162.562 kb on + strand, within CA264_00755 at 162.725 kb on - strand, within CA264_00755 at 162.763 kb on - strand, within CA264_00755 at 162.787 kb on + strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.836 kb on + strand at 162.837 kb on - strand at 162.841 kb on + strand at 162.842 kb on - strand at 162.842 kb on - strand at 162.861 kb on + strand at 162.862 kb on - strand at 162.870 kb on - strand at 162.918 kb on + strand at 162.923 kb on + strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.926 kb on - strand at 162.926 kb on - strand at 162.929 kb on - strand at 162.944 kb on + strand at 162.944 kb on + strand at 162.948 kb on + strand at 162.972 kb on - strand at 162.976 kb on - strand at 163.078 kb on + strand at 163.078 kb on + strand at 163.078 kb on + strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.080 kb on + strand at 163.081 kb on - strand at 163.081 kb on - strand at 163.127 kb on + strand at 163.128 kb on - strand at 163.140 kb on + strand at 163.140 kb on + strand at 163.142 kb on + strand at 163.142 kb on + strand at 163.143 kb on - strand at 163.143 kb on - strand at 163.143 kb on - strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.145 kb on - strand at 163.145 kb on - strand at 163.153 kb on + strand at 163.153 kb on + strand at 163.154 kb on - strand at 163.154 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 160,748 - CA264_00745 0.81 +2.0 160,786 - CA264_00745 0.86 +1.2 160,787 + CA264_00745 0.86 -0.6 160,787 + CA264_00745 0.86 -0.4 160,788 - CA264_00745 0.86 +0.3 160,818 + -0.6 160,818 + -0.5 160,882 + -0.7 160,883 - -0.3 160,898 + -2.2 160,911 - +0.4 160,934 - -0.6 160,987 + -0.1 160,999 + +0.7 160,999 + -0.4 161,000 - +0.4 161,003 + -0.1 161,041 + +0.4 161,043 + -0.1 161,067 - CA264_00750 0.15 +1.0 161,067 - CA264_00750 0.15 +0.6 161,067 - CA264_00750 0.15 -2.2 161,076 - CA264_00750 0.18 -0.7 161,109 - CA264_00750 0.27 +0.5 161,147 + CA264_00750 0.37 +0.9 161,179 + CA264_00750 0.46 +0.3 161,244 + CA264_00750 0.63 -0.3 161,246 + CA264_00750 0.64 -0.7 161,246 + CA264_00750 0.64 -0.5 161,246 + CA264_00750 0.64 -1.3 161,247 - CA264_00750 0.64 -0.5 161,247 - CA264_00750 0.64 -0.6 161,247 - CA264_00750 0.64 -0.4 161,250 + CA264_00750 0.65 -1.3 161,250 + CA264_00750 0.65 -0.0 161,251 - CA264_00750 0.65 -0.5 161,251 - CA264_00750 0.65 -0.3 161,253 - CA264_00750 0.66 -0.5 161,253 - CA264_00750 0.66 -1.1 161,303 + CA264_00750 0.79 +0.3 161,303 + CA264_00750 0.79 -0.0 161,303 + CA264_00750 0.79 -1.5 161,304 - CA264_00750 0.79 -1.0 161,304 - CA264_00750 0.79 -0.5 161,313 - CA264_00750 0.82 -0.9 161,333 - CA264_00750 0.87 -0.4 161,347 - +1.2 161,347 - +1.8 161,507 + -0.5 161,508 - -0.9 161,553 + +1.5 161,597 + +0.5 161,597 + +1.0 161,598 - -0.1 161,622 - +0.8 161,648 - +0.8 161,670 + -0.5 161,671 - -0.1 161,750 + -0.3 161,755 + +1.0 161,755 + -0.3 161,756 - +0.1 161,812 - CA264_00755 0.11 -1.0 161,831 + CA264_00755 0.13 -0.2 161,840 - CA264_00755 0.13 +0.8 161,862 + CA264_00755 0.15 -0.2 161,872 + CA264_00755 0.16 -0.6 161,872 + CA264_00755 0.16 +0.5 161,872 + CA264_00755 0.16 -0.3 161,873 - CA264_00755 0.16 +0.5 161,873 - CA264_00755 0.16 +0.7 161,873 - CA264_00755 0.16 +3.5 161,878 + CA264_00755 0.16 -0.0 161,935 - CA264_00755 0.21 +0.5 161,954 - CA264_00755 0.23 -0.4 162,093 + CA264_00755 0.34 -0.6 162,135 - CA264_00755 0.37 -0.3 162,135 - CA264_00755 0.37 +0.4 162,135 - CA264_00755 0.37 +0.1 162,138 + CA264_00755 0.37 -0.1 162,138 + CA264_00755 0.37 -0.3 162,139 - CA264_00755 0.37 -0.3 162,140 + CA264_00755 0.37 -0.0 162,285 - CA264_00755 0.49 +0.6 162,310 + CA264_00755 0.51 +0.1 162,310 + CA264_00755 0.51 -1.4 162,310 + CA264_00755 0.51 +1.2 162,311 - CA264_00755 0.51 +1.0 162,311 - CA264_00755 0.51 +1.3 162,328 + CA264_00755 0.52 +0.1 162,329 - CA264_00755 0.52 -0.0 162,348 + CA264_00755 0.54 -0.1 162,390 - CA264_00755 0.57 +1.1 162,462 - CA264_00755 0.63 -0.4 162,462 - CA264_00755 0.63 -0.3 162,524 - CA264_00755 0.68 -0.9 162,524 - CA264_00755 0.68 -0.9 162,555 + CA264_00755 0.70 +2.2 162,555 + CA264_00755 0.70 -0.9 162,556 - CA264_00755 0.70 +0.2 162,558 + CA264_00755 0.71 -0.4 162,559 - CA264_00755 0.71 -0.3 162,562 + CA264_00755 0.71 +0.9 162,562 + CA264_00755 0.71 -0.5 162,725 - CA264_00755 0.84 -0.3 162,763 - CA264_00755 0.87 +0.0 162,787 + CA264_00755 0.89 -1.7 162,788 - CA264_00755 0.89 -0.8 162,788 - CA264_00755 0.89 +0.5 162,788 - CA264_00755 0.89 -0.0 162,836 + -0.2 162,837 - -0.2 162,841 + +0.2 162,842 - -0.1 162,842 - +0.1 162,861 + -0.1 162,862 - -1.4 162,870 - -0.9 162,918 + -0.1 162,923 + -0.6 162,924 - -0.1 162,924 - -0.4 162,924 - -0.8 162,924 - +0.4 162,926 - +0.1 162,926 - -0.2 162,929 - +0.8 162,944 + -0.5 162,944 + +0.5 162,948 + -0.5 162,972 - +1.1 162,976 - +0.4 163,078 + -0.4 163,078 + -1.1 163,078 + -0.4 163,079 - +0.6 163,079 - +0.5 163,079 - +0.7 163,079 - -0.6 163,079 - -0.9 163,080 + -0.1 163,081 - +0.2 163,081 - +0.2 163,127 + -0.8 163,128 - -0.6 163,140 + -0.6 163,140 + -0.5 163,142 + +0.2 163,142 + +1.0 163,143 - +0.8 163,143 - +0.5 163,143 - -1.0 163,144 + +0.1 163,144 + +0.7 163,144 + -0.0 163,144 + -0.3 163,144 + +0.5 163,145 - +0.7 163,145 - -1.1 163,153 + +0.4 163,153 + +0.3 163,154 - -0.8 163,154 - +0.0
Or see this region's nucleotide sequence