Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00335 and CA264_00340 are separated by 303 nucleotides CA264_00340 and CA264_00345 are separated by 75 nucleotides CA264_00345 and CA264_00350 are separated by 149 nucleotides
CA264_00335: CA264_00335 - dicarboxylate/amino acid:cation symporter, at 76,903 to 78,207
_00335
CA264_00340: CA264_00340 - ZIP family zinc transporter, at 78,511 to 79,260
_00340
CA264_00345: CA264_00345 - peptidyl-prolyl cis-trans isomerase, at 79,336 to 79,794
_00345
CA264_00350: CA264_00350 - hypothetical protein, at 79,944 to 80,618
_00350
Position (kb)
78
79
80 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 77.860 kb on - strand, within CA264_00335 at 78.063 kb on + strand, within CA264_00335 at 78.072 kb on + strand, within CA264_00335 at 78.131 kb on + strand at 78.207 kb on + strand at 78.208 kb on - strand at 78.214 kb on + strand at 78.240 kb on - strand at 78.259 kb on + strand at 78.261 kb on + strand at 78.261 kb on + strand at 78.264 kb on + strand at 78.264 kb on + strand at 78.265 kb on - strand at 78.272 kb on + strand at 78.278 kb on + strand at 78.329 kb on + strand at 78.330 kb on - strand at 78.330 kb on - strand at 78.363 kb on + strand at 78.363 kb on + strand at 78.363 kb on + strand at 78.482 kb on + strand at 78.621 kb on + strand, within CA264_00340 at 78.885 kb on + strand, within CA264_00340 at 78.900 kb on + strand, within CA264_00340 at 78.900 kb on + strand, within CA264_00340 at 78.901 kb on - strand, within CA264_00340 at 79.011 kb on + strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.041 kb on + strand, within CA264_00340 at 79.050 kb on + strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.053 kb on - strand, within CA264_00340 at 79.078 kb on + strand, within CA264_00340 at 79.079 kb on - strand, within CA264_00340 at 79.079 kb on - strand, within CA264_00340 at 79.081 kb on - strand, within CA264_00340 at 79.090 kb on - strand, within CA264_00340 at 79.198 kb on - strand at 79.258 kb on + strand at 79.258 kb on + strand at 79.259 kb on - strand at 79.314 kb on - strand at 79.411 kb on + strand, within CA264_00345 at 79.474 kb on - strand, within CA264_00345 at 79.539 kb on - strand, within CA264_00345 at 79.705 kb on + strand, within CA264_00345 at 79.713 kb on + strand, within CA264_00345 at 79.759 kb on + strand at 79.802 kb on - strand at 79.808 kb on + strand at 79.824 kb on - strand at 79.825 kb on + strand at 79.825 kb on + strand at 79.825 kb on + strand at 79.826 kb on - strand at 79.843 kb on - strand at 79.913 kb on - strand at 79.916 kb on + strand at 79.920 kb on + strand at 79.920 kb on + strand at 79.921 kb on - strand at 79.921 kb on - strand at 79.968 kb on + strand at 79.969 kb on - strand at 79.989 kb on - strand at 80.103 kb on - strand, within CA264_00350 at 80.182 kb on + strand, within CA264_00350 at 80.183 kb on - strand, within CA264_00350 at 80.239 kb on - strand, within CA264_00350
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 77,860 - CA264_00335 0.73 -0.2 78,063 + CA264_00335 0.89 -0.8 78,072 + CA264_00335 0.90 -0.8 78,131 + -1.2 78,207 + -0.5 78,208 - +1.8 78,214 + +0.9 78,240 - -0.6 78,259 + +0.4 78,261 + -0.9 78,261 + +0.2 78,264 + -1.7 78,264 + -0.5 78,265 - -2.9 78,272 + -0.2 78,278 + -0.5 78,329 + -0.5 78,330 - -2.0 78,330 - -1.2 78,363 + -1.9 78,363 + -1.3 78,363 + -1.1 78,482 + -2.5 78,621 + CA264_00340 0.15 -0.2 78,885 + CA264_00340 0.50 +0.2 78,900 + CA264_00340 0.52 -0.3 78,900 + CA264_00340 0.52 -2.1 78,901 - CA264_00340 0.52 -1.7 79,011 + CA264_00340 0.67 -0.0 79,019 - CA264_00340 0.68 -1.6 79,019 - CA264_00340 0.68 -1.3 79,019 - CA264_00340 0.68 -1.0 79,041 + CA264_00340 0.71 +1.0 79,050 + CA264_00340 0.72 +0.4 79,051 - CA264_00340 0.72 -1.5 79,051 - CA264_00340 0.72 -0.8 79,051 - CA264_00340 0.72 -1.2 79,053 - CA264_00340 0.72 -1.3 79,078 + CA264_00340 0.76 -1.9 79,079 - CA264_00340 0.76 -0.8 79,079 - CA264_00340 0.76 +0.2 79,081 - CA264_00340 0.76 -1.0 79,090 - CA264_00340 0.77 +0.2 79,198 - -0.8 79,258 + +0.1 79,258 + -0.7 79,259 - +0.1 79,314 - -0.2 79,411 + CA264_00345 0.16 +0.3 79,474 - CA264_00345 0.30 -0.0 79,539 - CA264_00345 0.44 -0.2 79,705 + CA264_00345 0.80 -0.2 79,713 + CA264_00345 0.82 +0.1 79,759 + -1.4 79,802 - +0.2 79,808 + -0.4 79,824 - +0.6 79,825 + +1.0 79,825 + -0.5 79,825 + -0.1 79,826 - -0.7 79,843 - -0.0 79,913 - +0.1 79,916 + -0.7 79,920 + -0.0 79,920 + -0.4 79,921 - -0.4 79,921 - -1.0 79,968 + +0.0 79,969 - +0.1 79,989 - -0.3 80,103 - CA264_00350 0.24 -0.8 80,182 + CA264_00350 0.35 +0.4 80,183 - CA264_00350 0.35 -0.2 80,239 - CA264_00350 0.44 +0.5
Or see this region's nucleotide sequence