Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19905
Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.04 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,588,633 | - | CA264_19895 | 0.17 | -0.3 | |
4,588,651 | - | CA264_19895 | 0.20 | +0.9 | |
4,588,728 | + | CA264_19895 | 0.35 | +0.6 | |
4,588,790 | - | CA264_19895 | 0.47 | -0.3 | |
4,588,795 | + | CA264_19895 | 0.48 | +0.4 | |
4,588,796 | - | CA264_19895 | 0.48 | +0.2 | |
4,588,889 | + | CA264_19895 | 0.66 | -0.2 | |
4,588,890 | - | CA264_19895 | 0.66 | +0.3 | |
4,589,062 | + | -2.3 | |||
4,589,063 | - | +0.1 | |||
4,589,063 | - | +0.2 | |||
4,589,063 | - | +0.4 | |||
4,589,066 | + | -0.2 | |||
4,589,067 | - | +0.2 | |||
4,589,097 | - | -0.2 | |||
4,589,099 | - | +0.9 | |||
4,589,128 | - | -0.3 | |||
4,589,155 | - | -0.6 | |||
4,589,577 | + | +1.6 | |||
4,589,577 | + | +0.3 | |||
4,590,758 | - | -0.5 | |||
4,590,772 | - | -1.7 | |||
4,590,782 | - | -0.4 | |||
4,590,792 | - | -0.8 | |||
4,590,861 | + | +0.1 | |||
4,590,880 | - | +0.4 | |||
4,590,892 | - | -0.4 | |||
4,590,893 | + | +0.6 | |||
4,590,894 | - | -0.2 | |||
4,590,901 | - | +0.0 |
Or see this region's nucleotide sequence