Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17915 and CA264_17920 are separated by 21 nucleotides CA264_17920 and CA264_17925 are separated by 62 nucleotides
CA264_17915: CA264_17915 - LPS biosynthesis protein WbpP, at 4,164,761 to 4,165,786
_17915
CA264_17920: CA264_17920 - glucose-1-phosphate thymidylyltransferase, at 4,165,808 to 4,166,668
_17920
CA264_17925: CA264_17925 - chromate transporter, at 4,166,731 to 4,167,903
_17925
Position (kb)
4165
4166
4167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4164.869 kb on - strand, within CA264_17915 at 4164.923 kb on - strand, within CA264_17915 at 4164.991 kb on + strand, within CA264_17915 at 4165.079 kb on - strand, within CA264_17915 at 4165.262 kb on + strand, within CA264_17915 at 4165.520 kb on + strand, within CA264_17915 at 4165.698 kb on + strand at 4165.751 kb on - strand at 4165.785 kb on - strand at 4165.787 kb on + strand at 4165.804 kb on - strand at 4165.804 kb on - strand at 4165.805 kb on + strand at 4166.675 kb on - strand at 4166.678 kb on - strand at 4166.862 kb on - strand, within CA264_17925 at 4166.911 kb on - strand, within CA264_17925 at 4166.940 kb on - strand, within CA264_17925 at 4167.016 kb on + strand, within CA264_17925 at 4167.070 kb on - strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.163 kb on - strand, within CA264_17925 at 4167.286 kb on + strand, within CA264_17925 at 4167.315 kb on - strand, within CA264_17925 at 4167.408 kb on + strand, within CA264_17925 at 4167.505 kb on + strand, within CA264_17925 at 4167.519 kb on - strand, within CA264_17925 at 4167.607 kb on - strand, within CA264_17925 at 4167.607 kb on - strand, within CA264_17925 at 4167.628 kb on - strand, within CA264_17925
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 4,164,869 - CA264_17915 0.11 -3.3 4,164,923 - CA264_17915 0.16 -3.4 4,164,991 + CA264_17915 0.22 -1.0 4,165,079 - CA264_17915 0.31 -1.6 4,165,262 + CA264_17915 0.49 -3.4 4,165,520 + CA264_17915 0.74 +0.4 4,165,698 + -2.2 4,165,751 - -1.4 4,165,785 - -1.0 4,165,787 + +0.6 4,165,804 - -0.1 4,165,804 - -1.8 4,165,805 + +3.6 4,166,675 - -2.2 4,166,678 - -1.2 4,166,862 - CA264_17925 0.11 +1.2 4,166,911 - CA264_17925 0.15 +1.1 4,166,940 - CA264_17925 0.18 +1.0 4,167,016 + CA264_17925 0.24 +0.1 4,167,070 - CA264_17925 0.29 +1.2 4,167,073 + CA264_17925 0.29 +1.0 4,167,073 + CA264_17925 0.29 +1.0 4,167,073 + CA264_17925 0.29 +1.0 4,167,163 - CA264_17925 0.37 +1.0 4,167,286 + CA264_17925 0.47 +0.7 4,167,315 - CA264_17925 0.50 +0.8 4,167,408 + CA264_17925 0.58 +1.3 4,167,505 + CA264_17925 0.66 +1.5 4,167,519 - CA264_17925 0.67 +0.6 4,167,607 - CA264_17925 0.75 +0.2 4,167,607 - CA264_17925 0.75 +0.6 4,167,628 - CA264_17925 0.76 +0.3
Or see this region's nucleotide sequence