Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12930 and CA264_12935 are separated by 47 nucleotides CA264_12935 and CA264_12940 are separated by 78 nucleotides
CA264_12930: CA264_12930 - cell wall hydrolase, at 3,014,517 to 3,015,518
_12930
CA264_12935: CA264_12935 - serine hydrolase, at 3,015,566 to 3,016,486
_12935
CA264_12940: CA264_12940 - alcohol dehydrogenase, at 3,016,565 to 3,017,563
_12940
Position (kb)
3015
3016
3017 Strain fitness (log2 ratio)
-1
0
1
2 at 3014.599 kb on - strand at 3014.680 kb on + strand, within CA264_12930 at 3014.680 kb on + strand, within CA264_12930 at 3014.703 kb on - strand, within CA264_12930 at 3014.826 kb on - strand, within CA264_12930 at 3014.832 kb on + strand, within CA264_12930 at 3014.832 kb on + strand, within CA264_12930 at 3014.832 kb on + strand, within CA264_12930 at 3014.878 kb on + strand, within CA264_12930 at 3014.879 kb on - strand, within CA264_12930 at 3014.975 kb on + strand, within CA264_12930 at 3014.975 kb on + strand, within CA264_12930 at 3014.976 kb on - strand, within CA264_12930 at 3014.981 kb on - strand, within CA264_12930 at 3014.981 kb on - strand, within CA264_12930 at 3015.036 kb on + strand, within CA264_12930 at 3015.142 kb on + strand, within CA264_12930 at 3015.142 kb on + strand, within CA264_12930 at 3015.249 kb on + strand, within CA264_12930 at 3015.252 kb on - strand, within CA264_12930 at 3015.471 kb on + strand at 3015.471 kb on + strand at 3015.479 kb on + strand at 3015.481 kb on + strand at 3015.482 kb on - strand at 3015.508 kb on - strand at 3015.536 kb on - strand at 3015.537 kb on + strand at 3015.542 kb on + strand at 3015.542 kb on + strand at 3015.543 kb on - strand at 3015.563 kb on - strand at 3015.567 kb on + strand at 3015.567 kb on + strand at 3015.567 kb on + strand at 3015.568 kb on - strand at 3015.587 kb on + strand at 3015.587 kb on + strand at 3015.587 kb on + strand at 3015.588 kb on - strand at 3015.592 kb on - strand at 3015.592 kb on - strand at 3015.690 kb on + strand, within CA264_12935 at 3015.715 kb on - strand, within CA264_12935 at 3015.811 kb on + strand, within CA264_12935 at 3016.117 kb on + strand, within CA264_12935 at 3016.169 kb on + strand, within CA264_12935 at 3016.169 kb on + strand, within CA264_12935 at 3016.170 kb on - strand, within CA264_12935 at 3016.185 kb on - strand, within CA264_12935 at 3016.400 kb on + strand at 3016.487 kb on - strand at 3016.491 kb on - strand at 3016.614 kb on + strand at 3016.649 kb on + strand at 3016.650 kb on - strand at 3016.650 kb on - strand at 3016.650 kb on - strand at 3016.650 kb on - strand at 3016.807 kb on - strand, within CA264_12940 at 3016.807 kb on - strand, within CA264_12940 at 3016.939 kb on - strand, within CA264_12940 at 3016.939 kb on - strand, within CA264_12940 at 3016.945 kb on + strand, within CA264_12940 at 3017.220 kb on + strand, within CA264_12940 at 3017.221 kb on - strand, within CA264_12940 at 3017.261 kb on - strand, within CA264_12940 at 3017.390 kb on + strand, within CA264_12940 at 3017.391 kb on - strand, within CA264_12940 at 3017.412 kb on - strand, within CA264_12940 at 3017.414 kb on - strand, within CA264_12940 at 3017.418 kb on + strand, within CA264_12940 at 3017.419 kb on - strand, within CA264_12940 at 3017.432 kb on + strand, within CA264_12940 at 3017.468 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 3,014,599 - -1.0 3,014,680 + CA264_12930 0.16 -0.5 3,014,680 + CA264_12930 0.16 -0.1 3,014,703 - CA264_12930 0.19 -0.1 3,014,826 - CA264_12930 0.31 +1.0 3,014,832 + CA264_12930 0.31 -0.5 3,014,832 + CA264_12930 0.31 +0.3 3,014,832 + CA264_12930 0.31 -0.2 3,014,878 + CA264_12930 0.36 -0.9 3,014,879 - CA264_12930 0.36 -0.0 3,014,975 + CA264_12930 0.46 -0.6 3,014,975 + CA264_12930 0.46 -0.7 3,014,976 - CA264_12930 0.46 +0.0 3,014,981 - CA264_12930 0.46 +0.0 3,014,981 - CA264_12930 0.46 -0.6 3,015,036 + CA264_12930 0.52 -0.3 3,015,142 + CA264_12930 0.62 -0.4 3,015,142 + CA264_12930 0.62 +0.3 3,015,249 + CA264_12930 0.73 -0.7 3,015,252 - CA264_12930 0.73 -0.1 3,015,471 + -0.4 3,015,471 + -0.7 3,015,479 + +0.7 3,015,481 + +1.3 3,015,482 - +0.0 3,015,508 - +0.4 3,015,536 - -0.9 3,015,537 + -1.0 3,015,542 + +2.3 3,015,542 + -1.0 3,015,543 - +0.1 3,015,563 - +0.4 3,015,567 + -0.1 3,015,567 + +0.3 3,015,567 + -1.1 3,015,568 - -0.3 3,015,587 + -1.0 3,015,587 + +0.6 3,015,587 + -0.8 3,015,588 - -0.3 3,015,592 - -0.2 3,015,592 - +0.5 3,015,690 + CA264_12935 0.13 +0.6 3,015,715 - CA264_12935 0.16 +0.1 3,015,811 + CA264_12935 0.27 +1.3 3,016,117 + CA264_12935 0.60 +0.4 3,016,169 + CA264_12935 0.65 -1.0 3,016,169 + CA264_12935 0.65 +0.3 3,016,170 - CA264_12935 0.66 -0.3 3,016,185 - CA264_12935 0.67 +0.2 3,016,400 + +0.9 3,016,487 - +0.8 3,016,491 - +0.1 3,016,614 + -0.7 3,016,649 + -0.6 3,016,650 - +0.1 3,016,650 - +0.4 3,016,650 - +0.9 3,016,650 - +0.2 3,016,807 - CA264_12940 0.24 +0.3 3,016,807 - CA264_12940 0.24 +0.4 3,016,939 - CA264_12940 0.37 +0.5 3,016,939 - CA264_12940 0.37 -0.0 3,016,945 + CA264_12940 0.38 +1.1 3,017,220 + CA264_12940 0.66 +1.0 3,017,221 - CA264_12940 0.66 -0.2 3,017,261 - CA264_12940 0.70 -0.1 3,017,390 + CA264_12940 0.83 -0.7 3,017,391 - CA264_12940 0.83 +0.7 3,017,412 - CA264_12940 0.85 +0.5 3,017,414 - CA264_12940 0.85 +2.6 3,017,418 + CA264_12940 0.85 -0.4 3,017,419 - CA264_12940 0.85 -0.6 3,017,432 + CA264_12940 0.87 +0.9 3,017,468 + -0.8
Or see this region's nucleotide sequence