Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12360

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,878,180	-				+0.4
2,878,180	-				-0.4
2,878,180	-				-0.4
2,878,184	+				-2.7
2,878,231	+				-2.6
2,878,231	+				-3.2
2,878,232	-				-1.7
2,878,242	-				-2.4
2,878,276	-				-4.1
2,878,293	+				+2.4
2,878,294	-		CA264_12355	0.11	-1.6
2,878,386	+		CA264_12355	0.21	-2.3
2,878,404	+		CA264_12355	0.23	-3.6
2,878,405	-		CA264_12355	0.23	-1.8
2,878,405	-		CA264_12355	0.23	-0.8
2,878,426	+		CA264_12355	0.25	-3.5
2,878,427	-		CA264_12355	0.25	-3.1
2,878,547	-		CA264_12355	0.37	-2.1
2,878,563	+		CA264_12355	0.39	-3.4
2,878,570	+		CA264_12355	0.40	-2.9
2,878,576	-		CA264_12355	0.40	-1.1
2,878,621	-		CA264_12355	0.45	-0.3
2,878,621	-		CA264_12355	0.45	-2.6
2,878,775	+		CA264_12355	0.61	-3.5
2,878,778	+		CA264_12355	0.61	-2.8
2,878,812	-		CA264_12355	0.64	-0.9
2,878,857	-		CA264_12355	0.69	-3.7
2,878,923	-		CA264_12355	0.76	-3.6
2,878,988	-		CA264_12355	0.82	+0.0
2,879,001	+		CA264_12355	0.84	-2.5
2,879,001	+		CA264_12355	0.84	-0.6
2,879,114	+				-1.6
2,879,115	-				-1.8
2,879,140	-				-1.9
2,879,172	+				-0.5
2,880,365	+				-0.5
2,880,365	+				-1.4
2,880,379	-				-0.8
2,880,419	-				-2.2
2,880,443	-				-0.7
2,880,465	+				-1.7
2,880,466	-				-0.8
2,880,467	+				-0.8
2,880,467	+				-0.1
2,880,467	+				-3.2
2,880,467	+				-0.7
2,880,467	+				-2.6
2,880,473	-				-2.0
2,880,525	+				-2.1
2,880,529	+				-2.4
2,880,529	+				+1.3
2,880,530	-				+0.3
2,880,530	-				-2.2
2,880,561	+				-1.7
2,880,568	+				-4.1
2,880,571	+				-2.8
2,880,572	-				-1.8
2,880,580	-				-1.3
2,880,582	-				+0.5
2,880,605	+				-3.1
2,880,612	+				-2.8
2,880,627	+				+0.8
2,880,627	+				-1.0
2,880,628	-				-1.7
2,880,633	+		CA264_12365	0.10	-1.8
2,880,755	-		CA264_12365	0.17	-0.8
2,880,796	-		CA264_12365	0.19	-2.5
2,880,821	-		CA264_12365	0.20	-1.1
2,880,841	+		CA264_12365	0.22	-2.8
2,880,841	+		CA264_12365	0.22	-3.5
2,880,841	+		CA264_12365	0.22	-0.3
2,880,841	+		CA264_12365	0.22	-1.4
2,880,842	-		CA264_12365	0.22	-3.1
2,880,843	+		CA264_12365	0.22	-1.1
2,880,844	-		CA264_12365	0.22	-2.7
2,880,847	+		CA264_12365	0.22	-2.2
2,880,864	+		CA264_12365	0.23	-2.5
2,880,864	+		CA264_12365	0.23	-1.7
2,880,864	+				+2.3
2,880,866	+		CA264_12365	0.23	-1.2
2,880,866	+		CA264_12365	0.23	-1.8
2,880,898	+				+0.0
2,880,898	+		CA264_12365	0.25	-1.7
2,880,899	-		CA264_12365	0.25	-1.9
2,880,899	-		CA264_12365	0.25	-0.5
2,880,907	+		CA264_12365	0.25	-1.7
2,880,940	+		CA264_12365	0.27	-1.0
2,880,988	-		CA264_12365	0.30	-0.5
2,881,000	+		CA264_12365	0.30	-2.5
2,881,001	-		CA264_12365	0.30	-1.8
2,881,008	+		CA264_12365	0.31	-2.4
2,881,044	+		CA264_12365	0.33	-3.3
2,881,048	+		CA264_12365	0.33	+1.7
2,881,070	+		CA264_12365	0.34	-0.8
2,881,076	+		CA264_12365	0.34	-2.8
2,881,076	+		CA264_12365	0.34	-3.6
2,881,076	+		CA264_12365	0.34	-1.9
2,881,076	+		CA264_12365	0.34	-0.5
2,881,076	+		CA264_12365	0.34	-0.5
2,881,076	+		CA264_12365	0.34	-1.9
2,881,076	+		CA264_12365	0.34	-2.4
2,881,077	-		CA264_12365	0.34	-1.3
2,881,077	-				+0.3
2,881,077	-		CA264_12365	0.34	-3.0
2,881,077	-		CA264_12365	0.34	-1.5
2,881,077	-		CA264_12365	0.34	-1.7
2,881,077	-		CA264_12365	0.34	+0.9
2,881,077	-		CA264_12365	0.34	-1.5
2,881,117	+		CA264_12365	0.37	-3.1
2,881,118	-		CA264_12365	0.37	-0.8
2,881,125	+		CA264_12365	0.37	-1.5
2,881,176	+		CA264_12365	0.40	-1.7
2,881,178	+				+1.3
2,881,178	+		CA264_12365	0.40	-2.4
2,881,178	+		CA264_12365	0.40	+1.3
2,881,178	+		CA264_12365	0.40	-1.2
2,881,179	-		CA264_12365	0.40	-1.2
2,881,179	-		CA264_12365	0.40	-1.7
2,881,179	-		CA264_12365	0.40	-2.0
2,881,179	-				+0.8
2,881,179	-		CA264_12365	0.40	-0.2
2,881,179	-		CA264_12365	0.40	-1.6
2,881,233	+		CA264_12365	0.43	-2.4
2,881,233	+		CA264_12365	0.43	-1.0
2,881,233	+		CA264_12365	0.43	-0.1
2,881,234	-		CA264_12365	0.43	-0.7
2,881,254	+		CA264_12365	0.44	-2.8
2,881,258	+		CA264_12365	0.44	-2.0
2,881,262	+		CA264_12365	0.44	-3.1
2,881,262	+		CA264_12365	0.44	-1.4
2,881,265	+		CA264_12365	0.45	+0.0
2,881,265	+		CA264_12365	0.45	-1.0
2,881,290	+		CA264_12365	0.46	-0.7
2,881,304	+		CA264_12365	0.47	-2.4
2,881,304	+		CA264_12365	0.47	-1.2
2,881,305	-				-0.5
2,881,312	-		CA264_12365	0.47	-2.2
2,881,336	+		CA264_12365	0.49	-2.6
2,881,341	+		CA264_12365	0.49	-1.4