Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08865 and CA264_08870 are separated by 37 nucleotides CA264_08870 and CA264_08875 are separated by 543 nucleotides
CA264_08865: CA264_08865 - formimidoylglutamase, at 2,069,659 to 2,070,633
_08865
CA264_08870: CA264_08870 - imidazolonepropionase, at 2,070,671 to 2,071,924
_08870
CA264_08875: CA264_08875 - urocanate hydratase, at 2,072,468 to 2,074,171
_08875
Position (kb)
2070
2071
2072 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2069.691 kb on - strand at 2069.883 kb on + strand, within CA264_08865 at 2069.897 kb on + strand, within CA264_08865 at 2069.897 kb on + strand, within CA264_08865 at 2069.897 kb on + strand, within CA264_08865 at 2069.898 kb on - strand, within CA264_08865 at 2069.898 kb on - strand, within CA264_08865 at 2069.900 kb on - strand, within CA264_08865 at 2069.900 kb on - strand, within CA264_08865 at 2069.900 kb on - strand, within CA264_08865 at 2069.941 kb on + strand, within CA264_08865 at 2069.941 kb on + strand, within CA264_08865 at 2069.942 kb on - strand, within CA264_08865 at 2069.984 kb on + strand, within CA264_08865 at 2070.137 kb on + strand, within CA264_08865 at 2070.225 kb on - strand, within CA264_08865 at 2070.357 kb on - strand, within CA264_08865 at 2070.520 kb on + strand, within CA264_08865 at 2070.521 kb on - strand, within CA264_08865 at 2070.592 kb on + strand at 2070.593 kb on - strand at 2070.593 kb on - strand at 2070.593 kb on - strand at 2070.597 kb on + strand at 2070.598 kb on - strand at 2070.628 kb on - strand at 2070.628 kb on - strand at 2070.630 kb on - strand at 2070.630 kb on - strand at 2070.630 kb on - strand at 2070.633 kb on + strand at 2070.633 kb on + strand at 2070.633 kb on + strand at 2070.634 kb on - strand at 2070.666 kb on - strand at 2070.745 kb on + strand at 2070.751 kb on + strand at 2070.997 kb on - strand, within CA264_08870 at 2071.067 kb on + strand, within CA264_08870 at 2071.068 kb on - strand, within CA264_08870 at 2071.147 kb on + strand, within CA264_08870 at 2071.292 kb on + strand, within CA264_08870 at 2071.317 kb on + strand, within CA264_08870 at 2071.320 kb on - strand, within CA264_08870 at 2071.532 kb on + strand, within CA264_08870 at 2071.532 kb on + strand, within CA264_08870 at 2071.572 kb on - strand, within CA264_08870 at 2071.599 kb on - strand, within CA264_08870 at 2071.599 kb on - strand, within CA264_08870 at 2071.661 kb on - strand, within CA264_08870 at 2071.677 kb on - strand, within CA264_08870 at 2071.725 kb on + strand, within CA264_08870 at 2071.916 kb on - strand at 2071.984 kb on + strand at 2071.984 kb on + strand at 2071.985 kb on - strand at 2072.069 kb on + strand at 2072.100 kb on + strand at 2072.125 kb on + strand at 2072.166 kb on + strand at 2072.173 kb on - strand at 2072.178 kb on + strand at 2072.256 kb on - strand at 2072.273 kb on - strand at 2072.315 kb on + strand at 2072.408 kb on + strand at 2072.411 kb on - strand at 2072.428 kb on + strand at 2072.453 kb on - strand at 2072.641 kb on + strand, within CA264_08875 at 2072.641 kb on + strand, within CA264_08875 at 2072.641 kb on + strand, within CA264_08875 at 2072.645 kb on + strand, within CA264_08875 at 2072.645 kb on + strand, within CA264_08875 at 2072.646 kb on - strand, within CA264_08875 at 2072.696 kb on - strand, within CA264_08875 at 2072.696 kb on - strand, within CA264_08875 at 2072.852 kb on - strand, within CA264_08875
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 2,069,691 - -0.0 2,069,883 + CA264_08865 0.23 +2.0 2,069,897 + CA264_08865 0.24 -1.4 2,069,897 + CA264_08865 0.24 -0.9 2,069,897 + CA264_08865 0.24 -1.3 2,069,898 - CA264_08865 0.25 -0.5 2,069,898 - CA264_08865 0.25 +0.1 2,069,900 - CA264_08865 0.25 -0.3 2,069,900 - CA264_08865 0.25 -0.2 2,069,900 - CA264_08865 0.25 -1.4 2,069,941 + CA264_08865 0.29 -2.1 2,069,941 + CA264_08865 0.29 -1.3 2,069,942 - CA264_08865 0.29 -0.7 2,069,984 + CA264_08865 0.33 +0.4 2,070,137 + CA264_08865 0.49 -0.9 2,070,225 - CA264_08865 0.58 +0.0 2,070,357 - CA264_08865 0.72 +0.0 2,070,520 + CA264_08865 0.88 -1.5 2,070,521 - CA264_08865 0.88 +1.1 2,070,592 + -1.9 2,070,593 - -0.2 2,070,593 - +0.6 2,070,593 - -0.0 2,070,597 + -1.0 2,070,598 - -0.3 2,070,628 - -0.4 2,070,628 - -0.4 2,070,630 - +0.2 2,070,630 - -0.6 2,070,630 - -0.5 2,070,633 + +0.9 2,070,633 + -0.4 2,070,633 + -0.6 2,070,634 - +0.9 2,070,666 - +0.1 2,070,745 + -0.0 2,070,751 + +0.5 2,070,997 - CA264_08870 0.26 +0.5 2,071,067 + CA264_08870 0.32 +0.9 2,071,068 - CA264_08870 0.32 +0.6 2,071,147 + CA264_08870 0.38 +2.4 2,071,292 + CA264_08870 0.50 -1.4 2,071,317 + CA264_08870 0.52 +1.9 2,071,320 - CA264_08870 0.52 -0.0 2,071,532 + CA264_08870 0.69 +0.3 2,071,532 + CA264_08870 0.69 +0.2 2,071,572 - CA264_08870 0.72 +0.1 2,071,599 - CA264_08870 0.74 +0.4 2,071,599 - CA264_08870 0.74 +1.6 2,071,661 - CA264_08870 0.79 +2.1 2,071,677 - CA264_08870 0.80 +0.7 2,071,725 + CA264_08870 0.84 +0.5 2,071,916 - -1.6 2,071,984 + -0.3 2,071,984 + -0.5 2,071,985 - +0.2 2,072,069 + -0.2 2,072,100 + -0.0 2,072,125 + -0.3 2,072,166 + -0.4 2,072,173 - -0.6 2,072,178 + +0.6 2,072,256 - +0.3 2,072,273 - +0.7 2,072,315 + +0.1 2,072,408 + +0.3 2,072,411 - -0.0 2,072,428 + -0.4 2,072,453 - +0.3 2,072,641 + CA264_08875 0.10 -0.2 2,072,641 + CA264_08875 0.10 -2.0 2,072,641 + CA264_08875 0.10 +1.2 2,072,645 + CA264_08875 0.10 -0.2 2,072,645 + CA264_08875 0.10 -0.6 2,072,646 - CA264_08875 0.10 +0.3 2,072,696 - CA264_08875 0.13 -0.2 2,072,696 - CA264_08875 0.13 +0.0 2,072,852 - CA264_08875 0.23 +0.2
Or see this region's nucleotide sequence