Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08070 and CA264_08075 overlap by 7 nucleotides CA264_08075 and CA264_08080 are separated by 99 nucleotides
CA264_08070: CA264_08070 - gliding motility-associated ABC transporter substrate-binding protein GldG, at 1,863,663 to 1,865,354
_08070
CA264_08075: CA264_08075 - gliding motility-associated ABC transporter permease subunit GldF, at 1,865,348 to 1,866,076
_08075
CA264_08080: CA264_08080 - gliding motility-associated ABC transporter ATP-binding subunit GldA, at 1,866,176 to 1,867,090
_08080
Position (kb) 1865
1866
1867 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1864.366 kb on + strand, within CA264_08070 at 1864.560 kb on - strand, within CA264_08070 at 1864.569 kb on + strand, within CA264_08070 at 1864.575 kb on - strand, within CA264_08070 at 1864.577 kb on - strand, within CA264_08070 at 1864.577 kb on - strand, within CA264_08070 at 1864.623 kb on - strand, within CA264_08070 at 1864.638 kb on + strand, within CA264_08070 at 1864.682 kb on - strand, within CA264_08070 at 1864.743 kb on + strand, within CA264_08070 at 1864.744 kb on - strand, within CA264_08070 at 1864.747 kb on + strand, within CA264_08070 at 1864.748 kb on - strand, within CA264_08070 at 1864.748 kb on - strand, within CA264_08070 at 1864.760 kb on + strand, within CA264_08070 at 1864.760 kb on + strand, within CA264_08070 at 1864.897 kb on + strand, within CA264_08070 at 1864.905 kb on - strand, within CA264_08070 at 1865.000 kb on - strand, within CA264_08070 at 1865.286 kb on - strand at 1865.316 kb on - strand at 1865.316 kb on - strand at 1865.511 kb on - strand, within CA264_08075 at 1865.544 kb on + strand, within CA264_08075 at 1865.544 kb on + strand, within CA264_08075 at 1865.545 kb on - strand, within CA264_08075 at 1865.730 kb on + strand, within CA264_08075 at 1865.795 kb on - strand, within CA264_08075 at 1865.835 kb on - strand, within CA264_08075 at 1865.917 kb on + strand, within CA264_08075 at 1865.922 kb on - strand, within CA264_08075 at 1866.019 kb on + strand at 1866.079 kb on - strand at 1866.085 kb on - strand at 1866.808 kb on - strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.819 kb on + strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.820 kb on - strand, within CA264_08080 at 1866.823 kb on + strand, within CA264_08080
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 1,864,366 + CA264_08070 0.42 -3.3 1,864,560 - CA264_08070 0.53 -0.1 1,864,569 + CA264_08070 0.54 -2.0 1,864,575 - CA264_08070 0.54 -1.2 1,864,577 - CA264_08070 0.54 -1.1 1,864,577 - CA264_08070 0.54 -0.3 1,864,623 - CA264_08070 0.57 -2.5 1,864,638 + CA264_08070 0.58 -2.6 1,864,682 - CA264_08070 0.60 -2.1 1,864,743 + CA264_08070 0.64 -1.3 1,864,744 - CA264_08070 0.64 -0.2 1,864,747 + CA264_08070 0.64 +0.7 1,864,748 - CA264_08070 0.64 -1.8 1,864,748 - CA264_08070 0.64 +0.3 1,864,760 + CA264_08070 0.65 -0.9 1,864,760 + CA264_08070 0.65 -1.2 1,864,897 + CA264_08070 0.73 -1.2 1,864,905 - CA264_08070 0.73 -1.9 1,865,000 - CA264_08070 0.79 -0.7 1,865,286 - -0.9 1,865,316 - -0.1 1,865,316 - -0.4 1,865,511 - CA264_08075 0.22 -0.5 1,865,544 + CA264_08075 0.27 -2.1 1,865,544 + CA264_08075 0.27 -1.7 1,865,545 - CA264_08075 0.27 -2.1 1,865,730 + CA264_08075 0.52 +0.5 1,865,795 - CA264_08075 0.61 -1.2 1,865,835 - CA264_08075 0.67 -0.1 1,865,917 + CA264_08075 0.78 +0.7 1,865,922 - CA264_08075 0.79 -0.1 1,866,019 + -2.0 1,866,079 - -0.1 1,866,085 - -0.3 1,866,808 - CA264_08080 0.69 -0.9 1,866,819 + CA264_08080 0.70 -0.1 1,866,819 + CA264_08080 0.70 -0.1 1,866,819 + CA264_08080 0.70 -1.2 1,866,820 - CA264_08080 0.70 -1.2 1,866,820 - CA264_08080 0.70 +0.1 1,866,820 - CA264_08080 0.70 -0.5 1,866,820 - CA264_08080 0.70 -1.4 1,866,820 - CA264_08080 0.70 -0.1 1,866,820 - CA264_08080 0.70 -0.5 1,866,820 - CA264_08080 0.70 -1.3 1,866,820 - CA264_08080 0.70 -0.3 1,866,823 + CA264_08080 0.71 +0.9
Or see this region's nucleotide sequence