Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07105 and CA264_07110 are separated by 283 nucleotides CA264_07110 and CA264_07115 are separated by 4 nucleotides CA264_07115 and CA264_07120 are separated by 324 nucleotides
CA264_07105: CA264_07105 - phosphohydrolase, at 1,638,463 to 1,639,722
_07105
CA264_07110: CA264_07110 - hypothetical protein, at 1,640,006 to 1,640,308
_07110
CA264_07115: CA264_07115 - hypothetical protein, at 1,640,313 to 1,640,813
_07115
CA264_07120: CA264_07120 - citrate (Si)-synthase, at 1,641,138 to 1,642,424
_07120
Position (kb)
1640
1641 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1639.007 kb on + strand, within CA264_07105 at 1639.017 kb on - strand, within CA264_07105 at 1639.017 kb on - strand, within CA264_07105 at 1639.049 kb on + strand, within CA264_07105 at 1639.050 kb on - strand, within CA264_07105 at 1639.201 kb on - strand, within CA264_07105 at 1639.238 kb on - strand, within CA264_07105 at 1639.259 kb on + strand, within CA264_07105 at 1639.265 kb on + strand, within CA264_07105 at 1639.265 kb on + strand, within CA264_07105 at 1639.265 kb on + strand, within CA264_07105 at 1639.266 kb on - strand, within CA264_07105 at 1639.266 kb on - strand, within CA264_07105 at 1639.282 kb on - strand, within CA264_07105 at 1639.459 kb on - strand, within CA264_07105 at 1639.548 kb on - strand, within CA264_07105 at 1639.604 kb on + strand at 1639.604 kb on + strand at 1639.670 kb on + strand at 1639.671 kb on - strand at 1639.706 kb on - strand at 1639.706 kb on - strand at 1639.711 kb on - strand at 1639.727 kb on + strand at 1639.727 kb on + strand at 1639.727 kb on + strand at 1639.763 kb on + strand at 1639.766 kb on - strand at 1639.794 kb on + strand at 1639.794 kb on + strand at 1639.808 kb on - strand at 1639.886 kb on + strand at 1639.894 kb on + strand at 1639.894 kb on + strand at 1639.909 kb on + strand at 1639.909 kb on + strand at 1639.909 kb on + strand at 1639.931 kb on + strand at 1639.931 kb on + strand at 1639.936 kb on - strand at 1639.937 kb on + strand at 1639.937 kb on + strand at 1639.943 kb on + strand at 1639.984 kb on + strand at 1639.987 kb on + strand at 1639.992 kb on + strand at 1639.993 kb on - strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.006 kb on - strand at 1640.006 kb on - strand at 1640.006 kb on - strand at 1640.036 kb on + strand at 1640.037 kb on - strand, within CA264_07110 at 1640.037 kb on - strand, within CA264_07110 at 1640.038 kb on + strand, within CA264_07110 at 1640.038 kb on + strand, within CA264_07110 at 1640.039 kb on - strand, within CA264_07110 at 1640.039 kb on - strand, within CA264_07110 at 1640.046 kb on + strand, within CA264_07110 at 1640.125 kb on + strand, within CA264_07110 at 1640.125 kb on + strand, within CA264_07110 at 1640.131 kb on - strand, within CA264_07110 at 1640.278 kb on + strand at 1640.279 kb on - strand at 1640.279 kb on - strand at 1640.306 kb on + strand at 1640.314 kb on + strand at 1640.314 kb on + strand at 1640.352 kb on - strand at 1640.352 kb on - strand at 1640.352 kb on - strand at 1640.411 kb on + strand, within CA264_07115 at 1640.416 kb on - strand, within CA264_07115 at 1640.430 kb on + strand, within CA264_07115 at 1640.440 kb on + strand, within CA264_07115 at 1640.441 kb on - strand, within CA264_07115 at 1640.444 kb on + strand, within CA264_07115 at 1640.445 kb on - strand, within CA264_07115 at 1640.477 kb on + strand, within CA264_07115 at 1640.528 kb on + strand, within CA264_07115 at 1640.528 kb on + strand, within CA264_07115 at 1640.624 kb on + strand, within CA264_07115 at 1640.624 kb on + strand, within CA264_07115 at 1640.625 kb on - strand, within CA264_07115 at 1640.632 kb on + strand, within CA264_07115 at 1640.632 kb on + strand, within CA264_07115 at 1640.633 kb on - strand, within CA264_07115 at 1640.656 kb on + strand, within CA264_07115 at 1640.657 kb on - strand, within CA264_07115 at 1640.707 kb on + strand, within CA264_07115 at 1640.708 kb on - strand, within CA264_07115 at 1640.762 kb on + strand, within CA264_07115 at 1640.763 kb on - strand, within CA264_07115 at 1640.764 kb on + strand at 1640.764 kb on + strand at 1640.764 kb on + strand at 1640.764 kb on + strand at 1640.764 kb on + strand at 1640.764 kb on + strand at 1640.765 kb on - strand at 1640.765 kb on - strand at 1640.765 kb on - strand at 1640.765 kb on - strand at 1640.765 kb on - strand at 1640.854 kb on + strand at 1640.854 kb on + strand at 1640.855 kb on - strand at 1640.855 kb on - strand at 1640.858 kb on + strand at 1640.859 kb on - strand at 1640.865 kb on + strand at 1640.866 kb on - strand at 1640.958 kb on + strand at 1640.959 kb on - strand at 1640.959 kb on - strand at 1640.971 kb on - strand at 1640.971 kb on - strand at 1640.976 kb on - strand at 1640.998 kb on + strand at 1641.039 kb on - strand at 1641.048 kb on + strand at 1641.048 kb on + strand at 1641.049 kb on - strand at 1641.049 kb on - strand at 1641.049 kb on - strand at 1641.050 kb on + strand at 1641.050 kb on + strand at 1641.051 kb on - strand at 1641.102 kb on + strand at 1641.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 1,639,007 + CA264_07105 0.43 -1.0 1,639,017 - CA264_07105 0.44 +2.8 1,639,017 - CA264_07105 0.44 +0.4 1,639,049 + CA264_07105 0.47 -0.6 1,639,050 - CA264_07105 0.47 +0.9 1,639,201 - CA264_07105 0.59 +0.5 1,639,238 - CA264_07105 0.62 +0.0 1,639,259 + CA264_07105 0.63 -1.0 1,639,265 + CA264_07105 0.64 +0.9 1,639,265 + CA264_07105 0.64 -0.2 1,639,265 + CA264_07105 0.64 -0.5 1,639,266 - CA264_07105 0.64 +0.3 1,639,266 - CA264_07105 0.64 +0.6 1,639,282 - CA264_07105 0.65 +0.7 1,639,459 - CA264_07105 0.79 -0.5 1,639,548 - CA264_07105 0.86 -0.8 1,639,604 + +0.1 1,639,604 + +1.6 1,639,670 + -0.6 1,639,671 - +0.4 1,639,706 - -0.2 1,639,706 - -0.1 1,639,711 - -0.4 1,639,727 + +0.7 1,639,727 + +0.0 1,639,727 + +0.2 1,639,763 + -0.6 1,639,766 - -0.2 1,639,794 + -0.3 1,639,794 + -0.8 1,639,808 - -0.6 1,639,886 + +0.6 1,639,894 + +0.3 1,639,894 + -0.0 1,639,909 + +0.0 1,639,909 + +0.3 1,639,909 + -0.6 1,639,931 + -1.1 1,639,931 + -0.4 1,639,936 - +0.3 1,639,937 + +0.6 1,639,937 + +1.0 1,639,943 + -0.1 1,639,984 + +0.2 1,639,987 + +1.0 1,639,992 + +0.3 1,639,993 - -0.1 1,640,005 + +0.4 1,640,005 + -0.3 1,640,005 + -0.4 1,640,005 + -1.2 1,640,005 + -0.4 1,640,006 - -0.2 1,640,006 - -0.3 1,640,006 - -0.7 1,640,036 + -0.4 1,640,037 - CA264_07110 0.10 +0.9 1,640,037 - CA264_07110 0.10 -0.2 1,640,038 + CA264_07110 0.11 -0.4 1,640,038 + CA264_07110 0.11 +0.7 1,640,039 - CA264_07110 0.11 -1.0 1,640,039 - CA264_07110 0.11 -0.1 1,640,046 + CA264_07110 0.13 +1.2 1,640,125 + CA264_07110 0.39 -1.6 1,640,125 + CA264_07110 0.39 -0.2 1,640,131 - CA264_07110 0.41 +0.2 1,640,278 + -0.6 1,640,279 - -0.1 1,640,279 - -0.8 1,640,306 + +0.4 1,640,314 + -0.5 1,640,314 + -0.1 1,640,352 - -0.6 1,640,352 - -1.1 1,640,352 - -1.1 1,640,411 + CA264_07115 0.20 -0.6 1,640,416 - CA264_07115 0.21 +0.0 1,640,430 + CA264_07115 0.23 +0.6 1,640,440 + CA264_07115 0.25 -1.0 1,640,441 - CA264_07115 0.26 -0.9 1,640,444 + CA264_07115 0.26 +1.2 1,640,445 - CA264_07115 0.26 +0.3 1,640,477 + CA264_07115 0.33 -0.3 1,640,528 + CA264_07115 0.43 -1.1 1,640,528 + CA264_07115 0.43 +0.4 1,640,624 + CA264_07115 0.62 +0.3 1,640,624 + CA264_07115 0.62 -0.3 1,640,625 - CA264_07115 0.62 +0.9 1,640,632 + CA264_07115 0.64 -0.1 1,640,632 + CA264_07115 0.64 -0.3 1,640,633 - CA264_07115 0.64 -0.1 1,640,656 + CA264_07115 0.68 -0.2 1,640,657 - CA264_07115 0.69 +0.6 1,640,707 + CA264_07115 0.79 +0.2 1,640,708 - CA264_07115 0.79 -0.4 1,640,762 + CA264_07115 0.90 -0.9 1,640,763 - CA264_07115 0.90 +0.8 1,640,764 + -0.1 1,640,764 + -0.2 1,640,764 + +0.5 1,640,764 + +0.4 1,640,764 + -0.3 1,640,764 + +0.6 1,640,765 - +0.3 1,640,765 - -0.0 1,640,765 - -0.2 1,640,765 - +0.4 1,640,765 - +0.2 1,640,854 + +1.0 1,640,854 + +0.1 1,640,855 - -1.1 1,640,855 - -0.1 1,640,858 + +0.1 1,640,859 - -0.7 1,640,865 + -0.0 1,640,866 - -0.1 1,640,958 + -0.6 1,640,959 - -0.2 1,640,959 - -0.5 1,640,971 - -0.1 1,640,971 - +0.0 1,640,976 - -1.9 1,640,998 + -0.5 1,641,039 - -1.8 1,641,048 + +0.2 1,641,048 + -1.1 1,641,049 - -0.4 1,641,049 - -0.2 1,641,049 - +0.2 1,641,050 + -0.1 1,641,050 + +0.6 1,641,051 - -0.4 1,641,102 + +1.3 1,641,124 - +0.2
Or see this region's nucleotide sequence