Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03910 and CA264_03915 are separated by 178 nucleotides CA264_03915 and CA264_03920 are separated by 3 nucleotides
CA264_03910: CA264_03910 - family 2 glycosyl transferase, at 909,820 to 910,911
_03910
CA264_03915: CA264_03915 - hydrolase TatD, at 911,090 to 911,857
_03915
CA264_03920: CA264_03920 - L-asparaginase 1, at 911,861 to 912,928
_03920
Position (kb)
911
912 Strain fitness (log2 ratio)
-1
0
1
2 at 910.105 kb on + strand, within CA264_03910 at 910.106 kb on - strand, within CA264_03910 at 910.106 kb on - strand, within CA264_03910 at 910.107 kb on + strand, within CA264_03910 at 910.107 kb on + strand, within CA264_03910 at 910.108 kb on - strand, within CA264_03910 at 910.108 kb on - strand, within CA264_03910 at 910.108 kb on - strand, within CA264_03910 at 910.348 kb on + strand, within CA264_03910 at 910.348 kb on + strand, within CA264_03910 at 910.353 kb on - strand, within CA264_03910 at 910.436 kb on - strand, within CA264_03910 at 910.436 kb on - strand, within CA264_03910 at 910.463 kb on + strand, within CA264_03910 at 910.470 kb on + strand, within CA264_03910 at 910.471 kb on - strand, within CA264_03910 at 910.538 kb on - strand, within CA264_03910 at 910.575 kb on + strand, within CA264_03910 at 910.582 kb on - strand, within CA264_03910 at 910.582 kb on - strand, within CA264_03910 at 910.640 kb on - strand, within CA264_03910 at 910.640 kb on - strand, within CA264_03910 at 910.672 kb on + strand, within CA264_03910 at 910.704 kb on + strand, within CA264_03910 at 910.705 kb on - strand, within CA264_03910 at 910.740 kb on + strand, within CA264_03910 at 910.741 kb on - strand at 910.763 kb on - strand, within CA264_03910 at 910.807 kb on + strand at 910.807 kb on + strand at 910.808 kb on - strand at 910.813 kb on + strand at 910.814 kb on - strand at 910.814 kb on - strand at 910.814 kb on - strand at 910.814 kb on - strand at 910.829 kb on + strand at 910.830 kb on - strand at 910.830 kb on - strand at 910.830 kb on - strand at 910.853 kb on + strand at 910.853 kb on + strand at 910.854 kb on - strand at 910.857 kb on + strand at 910.857 kb on + strand at 910.864 kb on + strand at 910.881 kb on + strand at 910.882 kb on - strand at 910.910 kb on - strand at 910.924 kb on + strand at 911.033 kb on - strand at 911.042 kb on + strand at 911.042 kb on + strand at 911.074 kb on - strand at 911.087 kb on + strand at 911.087 kb on + strand at 911.087 kb on + strand at 911.088 kb on - strand at 911.088 kb on - strand at 911.088 kb on - strand at 911.116 kb on + strand at 911.117 kb on - strand at 911.120 kb on + strand at 911.181 kb on + strand, within CA264_03915 at 911.218 kb on + strand, within CA264_03915 at 911.219 kb on - strand, within CA264_03915 at 911.250 kb on - strand, within CA264_03915 at 911.387 kb on + strand, within CA264_03915 at 911.666 kb on + strand, within CA264_03915 at 911.667 kb on - strand, within CA264_03915 at 911.708 kb on + strand, within CA264_03915 at 911.709 kb on - strand, within CA264_03915 at 911.753 kb on + strand, within CA264_03915 at 911.753 kb on + strand, within CA264_03915 at 911.855 kb on + strand at 911.861 kb on - strand at 911.877 kb on + strand at 911.884 kb on - strand at 911.884 kb on - strand at 911.919 kb on + strand at 911.923 kb on + strand at 911.923 kb on + strand at 911.931 kb on - strand at 911.931 kb on - strand at 912.003 kb on + strand, within CA264_03920 at 912.038 kb on + strand, within CA264_03920 at 912.082 kb on + strand, within CA264_03920 at 912.124 kb on - strand, within CA264_03920 at 912.134 kb on + strand, within CA264_03920 at 912.143 kb on + strand, within CA264_03920 at 912.144 kb on - strand, within CA264_03920 at 912.144 kb on - strand, within CA264_03920 at 912.185 kb on + strand, within CA264_03920 at 912.206 kb on + strand, within CA264_03920 at 912.358 kb on + strand, within CA264_03920 at 912.358 kb on + strand, within CA264_03920 at 912.359 kb on - strand, within CA264_03920 at 912.363 kb on - strand, within CA264_03920 at 912.474 kb on + strand, within CA264_03920 at 912.479 kb on + strand, within CA264_03920 at 912.519 kb on + strand, within CA264_03920 at 912.520 kb on - strand, within CA264_03920 at 912.520 kb on - strand, within CA264_03920 at 912.523 kb on - strand, within CA264_03920 at 912.576 kb on + strand, within CA264_03920 at 912.775 kb on + strand, within CA264_03920 at 912.775 kb on + strand, within CA264_03920 at 912.776 kb on - strand, within CA264_03920 at 912.776 kb on - strand, within CA264_03920 at 912.776 kb on - strand, within CA264_03920 at 912.776 kb on - strand, within CA264_03920 at 912.786 kb on + strand, within CA264_03920 at 912.817 kb on + strand, within CA264_03920 at 912.818 kb on - strand, within CA264_03920
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 910,105 + CA264_03910 0.26 +1.5 910,106 - CA264_03910 0.26 +0.0 910,106 - CA264_03910 0.26 -0.7 910,107 + CA264_03910 0.26 +0.3 910,107 + CA264_03910 0.26 +0.1 910,108 - CA264_03910 0.26 +1.0 910,108 - CA264_03910 0.26 -0.0 910,108 - CA264_03910 0.26 +0.3 910,348 + CA264_03910 0.48 +0.1 910,348 + CA264_03910 0.48 -1.2 910,353 - CA264_03910 0.49 -1.6 910,436 - CA264_03910 0.56 -1.0 910,436 - CA264_03910 0.56 +0.1 910,463 + CA264_03910 0.59 -0.9 910,470 + CA264_03910 0.60 -0.4 910,471 - CA264_03910 0.60 -0.5 910,538 - CA264_03910 0.66 +0.2 910,575 + CA264_03910 0.69 +0.2 910,582 - CA264_03910 0.70 -0.6 910,582 - CA264_03910 0.70 +0.4 910,640 - CA264_03910 0.75 -0.1 910,640 - CA264_03910 0.75 +0.5 910,672 + CA264_03910 0.78 -0.4 910,704 + CA264_03910 0.81 -1.0 910,705 - CA264_03910 0.81 -1.0 910,740 + CA264_03910 0.84 +0.5 910,741 - +1.5 910,763 - CA264_03910 0.86 +0.2 910,807 + -0.1 910,807 + +1.5 910,808 - +0.2 910,813 + +2.5 910,814 - +0.7 910,814 - -1.3 910,814 - +0.1 910,814 - +0.8 910,829 + -0.2 910,830 - -0.6 910,830 - -1.1 910,830 - +1.5 910,853 + +0.2 910,853 + +0.3 910,854 - -1.6 910,857 + -0.8 910,857 + +0.0 910,864 + -0.5 910,881 + +0.2 910,882 - -0.8 910,910 - -0.5 910,924 + -0.1 911,033 - +0.3 911,042 + +0.2 911,042 + -0.8 911,074 - -0.3 911,087 + +0.3 911,087 + +1.0 911,087 + +0.3 911,088 - +1.0 911,088 - +0.6 911,088 - +0.5 911,116 + +0.9 911,117 - +0.3 911,120 + -0.1 911,181 + CA264_03915 0.12 +1.1 911,218 + CA264_03915 0.17 +1.1 911,219 - CA264_03915 0.17 +0.9 911,250 - CA264_03915 0.21 +0.7 911,387 + CA264_03915 0.39 +1.7 911,666 + CA264_03915 0.75 +0.9 911,667 - CA264_03915 0.75 +0.0 911,708 + CA264_03915 0.80 -0.2 911,709 - CA264_03915 0.81 +1.1 911,753 + CA264_03915 0.86 +0.3 911,753 + CA264_03915 0.86 -0.8 911,855 + -0.9 911,861 - -1.3 911,877 + -0.6 911,884 - -0.4 911,884 - -0.6 911,919 + -1.1 911,923 + -0.1 911,923 + +1.3 911,931 - -0.7 911,931 - -0.5 912,003 + CA264_03920 0.13 +0.5 912,038 + CA264_03920 0.17 +0.6 912,082 + CA264_03920 0.21 -0.3 912,124 - CA264_03920 0.25 -0.2 912,134 + CA264_03920 0.26 +1.2 912,143 + CA264_03920 0.26 -1.0 912,144 - CA264_03920 0.26 -0.7 912,144 - CA264_03920 0.26 -0.7 912,185 + CA264_03920 0.30 +0.6 912,206 + CA264_03920 0.32 +0.5 912,358 + CA264_03920 0.47 +0.7 912,358 + CA264_03920 0.47 -0.2 912,359 - CA264_03920 0.47 -0.7 912,363 - CA264_03920 0.47 -1.2 912,474 + CA264_03920 0.57 +0.6 912,479 + CA264_03920 0.58 +0.4 912,519 + CA264_03920 0.62 +0.5 912,520 - CA264_03920 0.62 +0.4 912,520 - CA264_03920 0.62 -0.1 912,523 - CA264_03920 0.62 -0.1 912,576 + CA264_03920 0.67 +0.3 912,775 + CA264_03920 0.86 +0.2 912,775 + CA264_03920 0.86 -0.5 912,776 - CA264_03920 0.86 +0.3 912,776 - CA264_03920 0.86 +0.5 912,776 - CA264_03920 0.86 +0.3 912,776 - CA264_03920 0.86 -0.3 912,786 + CA264_03920 0.87 -1.0 912,817 + CA264_03920 0.90 +0.7 912,818 - CA264_03920 0.90 +0.9
Or see this region's nucleotide sequence