Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03380 and CA264_03385 are separated by 215 nucleotides CA264_03385 and CA264_03390 are separated by 247 nucleotides CA264_03390 and CA264_03395 are separated by 122 nucleotides
CA264_03380: CA264_03380 - hypothetical protein, at 790,528 to 791,238
_03380
CA264_03385: CA264_03385 - hypothetical protein, at 791,454 to 791,675
_03385
CA264_03390: CA264_03390 - hypothetical protein, at 791,923 to 792,291
_03390
CA264_03395: CA264_03395 - phospholipase, at 792,414 to 793,115
_03395
Position (kb) 791
792
793 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 790.966 kb on + strand, within CA264_03380 at 790.966 kb on + strand, within CA264_03380 at 790.967 kb on - strand, within CA264_03380 at 791.002 kb on + strand, within CA264_03380 at 791.005 kb on + strand, within CA264_03380 at 791.006 kb on - strand, within CA264_03380 at 791.083 kb on + strand, within CA264_03380 at 791.084 kb on - strand, within CA264_03380 at 791.162 kb on - strand, within CA264_03380 at 791.303 kb on + strand at 791.310 kb on + strand at 791.311 kb on - strand at 791.378 kb on - strand at 791.413 kb on + strand at 791.439 kb on + strand at 791.439 kb on + strand at 791.444 kb on + strand at 791.613 kb on + strand, within CA264_03385 at 791.614 kb on - strand, within CA264_03385 at 791.618 kb on + strand, within CA264_03385 at 791.619 kb on - strand, within CA264_03385 at 791.675 kb on + strand at 791.691 kb on + strand at 791.714 kb on + strand at 791.714 kb on + strand at 791.715 kb on - strand at 791.813 kb on + strand at 791.858 kb on + strand at 791.859 kb on - strand at 791.869 kb on + strand at 791.875 kb on + strand at 791.876 kb on - strand at 791.922 kb on + strand at 791.965 kb on - strand, within CA264_03390 at 792.031 kb on - strand, within CA264_03390 at 792.203 kb on - strand, within CA264_03390 at 792.287 kb on - strand at 792.290 kb on - strand at 792.298 kb on + strand at 792.298 kb on + strand at 792.301 kb on - strand at 792.378 kb on + strand at 792.382 kb on + strand at 792.383 kb on - strand at 792.383 kb on - strand at 792.435 kb on + strand at 792.436 kb on - strand at 792.436 kb on - strand at 792.436 kb on - strand at 792.544 kb on - strand, within CA264_03395 at 792.693 kb on + strand, within CA264_03395 at 792.707 kb on + strand, within CA264_03395 at 792.707 kb on + strand, within CA264_03395 at 792.742 kb on - strand, within CA264_03395 at 792.742 kb on - strand, within CA264_03395 at 792.777 kb on + strand, within CA264_03395 at 792.832 kb on - strand, within CA264_03395 at 792.869 kb on + strand, within CA264_03395 at 792.869 kb on + strand, within CA264_03395 at 792.903 kb on + strand, within CA264_03395 at 792.904 kb on - strand, within CA264_03395 at 792.939 kb on - strand, within CA264_03395 at 792.983 kb on + strand, within CA264_03395 at 793.028 kb on - strand, within CA264_03395 at 793.028 kb on - strand, within CA264_03395 at 793.032 kb on + strand, within CA264_03395 at 793.032 kb on + strand, within CA264_03395 at 793.033 kb on - strand, within CA264_03395 at 793.035 kb on - strand, within CA264_03395 at 793.079 kb on + strand at 793.113 kb on + strand at 793.194 kb on + strand at 793.195 kb on - strand at 793.195 kb on - strand at 793.195 kb on - strand at 793.195 kb on - strand at 793.196 kb on + strand at 793.196 kb on + strand at 793.197 kb on - strand at 793.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 790,966 + CA264_03380 0.62 +2.2 790,966 + CA264_03380 0.62 +0.4 790,967 - CA264_03380 0.62 +0.0 791,002 + CA264_03380 0.67 -0.2 791,005 + CA264_03380 0.67 +1.0 791,006 - CA264_03380 0.67 -0.0 791,083 + CA264_03380 0.78 +0.2 791,084 - CA264_03380 0.78 +0.1 791,162 - CA264_03380 0.89 +0.2 791,303 + +0.1 791,310 + +0.6 791,311 - +1.1 791,378 - +0.4 791,413 + +1.2 791,439 + +0.4 791,439 + +0.4 791,444 + -0.4 791,613 + CA264_03385 0.72 +1.1 791,614 - CA264_03385 0.72 +0.1 791,618 + CA264_03385 0.74 +2.7 791,619 - CA264_03385 0.74 -1.6 791,675 + +0.0 791,691 + -0.1 791,714 + -0.3 791,714 + -0.1 791,715 - +0.2 791,813 + +0.8 791,858 + +0.8 791,859 - -0.4 791,869 + -0.1 791,875 + +0.3 791,876 - -0.8 791,922 + +0.9 791,965 - CA264_03390 0.11 -1.1 792,031 - CA264_03390 0.29 -0.5 792,203 - CA264_03390 0.76 -2.1 792,287 - -0.9 792,290 - +2.9 792,298 + +0.4 792,298 + +0.1 792,301 - -0.4 792,378 + +0.1 792,382 + -0.0 792,383 - -2.9 792,383 - -0.1 792,435 + -0.9 792,436 - -0.4 792,436 - -0.8 792,436 - -0.6 792,544 - CA264_03395 0.19 -0.9 792,693 + CA264_03395 0.40 -0.8 792,707 + CA264_03395 0.42 +0.6 792,707 + CA264_03395 0.42 -0.3 792,742 - CA264_03395 0.47 -0.2 792,742 - CA264_03395 0.47 +0.2 792,777 + CA264_03395 0.52 -0.7 792,832 - CA264_03395 0.60 -0.8 792,869 + CA264_03395 0.65 -0.9 792,869 + CA264_03395 0.65 -0.2 792,903 + CA264_03395 0.70 -0.4 792,904 - CA264_03395 0.70 -0.3 792,939 - CA264_03395 0.75 +0.8 792,983 + CA264_03395 0.81 -0.8 793,028 - CA264_03395 0.87 +0.1 793,028 - CA264_03395 0.87 -0.4 793,032 + CA264_03395 0.88 -0.3 793,032 + CA264_03395 0.88 +0.6 793,033 - CA264_03395 0.88 -0.6 793,035 - CA264_03395 0.88 -0.3 793,079 + -0.7 793,113 + +0.5 793,194 + -1.0 793,195 - -0.3 793,195 - +0.2 793,195 - -0.7 793,195 - -2.2 793,196 + -0.0 793,196 + +0.0 793,197 - -0.4 793,197 - -0.7
Or see this region's nucleotide sequence