Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03240 and CA264_03245 are separated by 44 nucleotides CA264_03245 and CA264_03250 are separated by 38 nucleotides CA264_03250 and CA264_03255 are separated by 161 nucleotides CA264_03255 and CA264_03260 are separated by 192 nucleotides
CA264_03240: CA264_03240 - metal transporter, at 762,772 to 764,670
_03240
CA264_03245: CA264_03245 - four helix bundle protein, at 764,715 to 765,092
_03245
CA264_03250: CA264_03250 - metal transporter, at 765,131 to 766,405
_03250
CA264_03255: CA264_03255 - hypothetical protein, at 766,567 to 767,004
_03255
CA264_03260: CA264_03260 - MBL fold hydrolase, at 767,197 to 768,039
_03260
Position (kb) 765
766
767 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 764.147 kb on - strand, within CA264_03240 at 764.212 kb on + strand, within CA264_03240 at 764.245 kb on - strand, within CA264_03240 at 764.269 kb on - strand, within CA264_03240 at 764.493 kb on + strand at 764.493 kb on + strand at 764.497 kb on + strand at 764.498 kb on - strand at 764.498 kb on - strand at 764.498 kb on - strand at 764.499 kb on + strand at 764.499 kb on + strand at 764.592 kb on + strand at 764.790 kb on - strand, within CA264_03245 at 764.799 kb on - strand, within CA264_03245 at 764.867 kb on + strand, within CA264_03245 at 764.867 kb on + strand, within CA264_03245 at 764.867 kb on + strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.871 kb on + strand, within CA264_03245 at 764.968 kb on - strand, within CA264_03245 at 764.973 kb on - strand, within CA264_03245 at 765.077 kb on + strand at 765.402 kb on - strand, within CA264_03250 at 765.412 kb on + strand, within CA264_03250 at 765.442 kb on - strand, within CA264_03250 at 765.483 kb on - strand, within CA264_03250 at 765.726 kb on + strand, within CA264_03250 at 765.727 kb on - strand, within CA264_03250 at 765.727 kb on - strand, within CA264_03250 at 765.772 kb on + strand, within CA264_03250 at 765.772 kb on + strand, within CA264_03250 at 765.816 kb on + strand, within CA264_03250 at 765.816 kb on + strand, within CA264_03250 at 765.816 kb on + strand, within CA264_03250 at 765.817 kb on - strand, within CA264_03250 at 765.817 kb on - strand, within CA264_03250 at 765.817 kb on - strand, within CA264_03250 at 765.819 kb on + strand, within CA264_03250 at 765.820 kb on - strand, within CA264_03250 at 765.824 kb on - strand, within CA264_03250 at 765.830 kb on - strand, within CA264_03250 at 765.924 kb on + strand, within CA264_03250 at 765.924 kb on + strand, within CA264_03250 at 765.979 kb on + strand, within CA264_03250 at 765.980 kb on - strand, within CA264_03250 at 765.998 kb on + strand, within CA264_03250 at 766.095 kb on + strand, within CA264_03250 at 766.095 kb on + strand, within CA264_03250 at 766.095 kb on + strand, within CA264_03250 at 766.125 kb on + strand, within CA264_03250 at 766.129 kb on + strand, within CA264_03250 at 766.129 kb on + strand, within CA264_03250 at 766.130 kb on - strand, within CA264_03250 at 766.130 kb on - strand, within CA264_03250 at 766.164 kb on + strand, within CA264_03250 at 766.165 kb on - strand, within CA264_03250 at 766.165 kb on - strand, within CA264_03250 at 766.225 kb on + strand, within CA264_03250 at 766.299 kb on - strand at 766.304 kb on - strand at 766.340 kb on + strand at 766.389 kb on - strand at 766.392 kb on - strand at 766.635 kb on - strand, within CA264_03255 at 766.879 kb on - strand, within CA264_03255 at 766.920 kb on + strand, within CA264_03255 at 766.920 kb on + strand, within CA264_03255 at 766.920 kb on + strand, within CA264_03255 at 766.920 kb on + strand, within CA264_03255 at 766.921 kb on - strand, within CA264_03255 at 766.921 kb on - strand, within CA264_03255 at 766.921 kb on - strand, within CA264_03255 at 766.921 kb on - strand, within CA264_03255 at 766.981 kb on + strand at 767.012 kb on - strand at 767.012 kb on - strand at 767.032 kb on + strand at 767.032 kb on + strand at 767.032 kb on + strand at 767.033 kb on - strand at 767.033 kb on - strand at 767.085 kb on - strand at 767.132 kb on + strand at 767.140 kb on + strand at 767.141 kb on - strand at 767.167 kb on + strand at 767.167 kb on + strand at 767.167 kb on + strand at 767.206 kb on + strand at 767.207 kb on - strand at 767.221 kb on - strand at 767.232 kb on + strand at 767.249 kb on - strand at 767.249 kb on - strand at 767.249 kb on - strand at 767.362 kb on - strand, within CA264_03260
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 764,147 - CA264_03240 0.72 +0.9 764,212 + CA264_03240 0.76 +0.2 764,245 - CA264_03240 0.78 -1.3 764,269 - CA264_03240 0.79 -0.0 764,493 + +1.4 764,493 + +0.8 764,497 + +0.1 764,498 - -0.1 764,498 - -1.7 764,498 - -1.8 764,499 + -0.2 764,499 + -1.1 764,592 + -1.2 764,790 - CA264_03245 0.20 -1.3 764,799 - CA264_03245 0.22 -0.6 764,867 + CA264_03245 0.40 -0.7 764,867 + CA264_03245 0.40 +0.8 764,867 + CA264_03245 0.40 -1.7 764,868 - CA264_03245 0.40 -1.6 764,868 - CA264_03245 0.40 -1.5 764,868 - CA264_03245 0.40 +0.6 764,868 - CA264_03245 0.40 -1.2 764,871 + CA264_03245 0.41 -0.3 764,968 - CA264_03245 0.67 -2.3 764,973 - CA264_03245 0.68 -2.4 765,077 + -1.5 765,402 - CA264_03250 0.21 -1.4 765,412 + CA264_03250 0.22 -0.7 765,442 - CA264_03250 0.24 -2.4 765,483 - CA264_03250 0.28 -2.0 765,726 + CA264_03250 0.47 +1.2 765,727 - CA264_03250 0.47 +0.1 765,727 - CA264_03250 0.47 -0.4 765,772 + CA264_03250 0.50 +0.8 765,772 + CA264_03250 0.50 -0.4 765,816 + CA264_03250 0.54 -0.2 765,816 + CA264_03250 0.54 -0.1 765,816 + CA264_03250 0.54 +0.4 765,817 - CA264_03250 0.54 -1.4 765,817 - CA264_03250 0.54 -0.9 765,817 - CA264_03250 0.54 -1.8 765,819 + CA264_03250 0.54 +1.1 765,820 - CA264_03250 0.54 -1.3 765,824 - CA264_03250 0.54 -0.8 765,830 - CA264_03250 0.55 -1.2 765,924 + CA264_03250 0.62 -0.1 765,924 + CA264_03250 0.62 +0.6 765,979 + CA264_03250 0.67 -0.3 765,980 - CA264_03250 0.67 -0.5 765,998 + CA264_03250 0.68 -1.9 766,095 + CA264_03250 0.76 -0.4 766,095 + CA264_03250 0.76 +0.6 766,095 + CA264_03250 0.76 -0.5 766,125 + CA264_03250 0.78 +1.2 766,129 + CA264_03250 0.78 -0.1 766,129 + CA264_03250 0.78 -0.6 766,130 - CA264_03250 0.78 -0.6 766,130 - CA264_03250 0.78 -1.7 766,164 + CA264_03250 0.81 -0.2 766,165 - CA264_03250 0.81 -1.6 766,165 - CA264_03250 0.81 -0.4 766,225 + CA264_03250 0.86 -1.1 766,299 - -0.6 766,304 - +0.0 766,340 + -1.2 766,389 - -1.2 766,392 - -0.9 766,635 - CA264_03255 0.16 -2.3 766,879 - CA264_03255 0.71 -0.9 766,920 + CA264_03255 0.81 -0.5 766,920 + CA264_03255 0.81 -2.3 766,920 + CA264_03255 0.81 +0.5 766,920 + CA264_03255 0.81 +0.0 766,921 - CA264_03255 0.81 -0.8 766,921 - CA264_03255 0.81 -0.1 766,921 - CA264_03255 0.81 -0.2 766,921 - CA264_03255 0.81 -0.9 766,981 + +1.0 767,012 - +0.5 767,012 - +0.5 767,032 + +0.1 767,032 + -0.9 767,032 + +0.2 767,033 - -3.1 767,033 - -0.5 767,085 - -1.0 767,132 + +0.1 767,140 + -1.5 767,141 - -0.8 767,167 + -0.5 767,167 + +1.0 767,167 + -0.2 767,206 + +0.1 767,207 - -1.3 767,221 - -0.6 767,232 + -0.3 767,249 - -0.3 767,249 - -0.7 767,249 - -1.5 767,362 - CA264_03260 0.20 -1.3
Or see this region's nucleotide sequence