Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01390 and CA264_01395 are separated by 0 nucleotides CA264_01395 and CA264_01400 are separated by 73 nucleotides
CA264_01390: CA264_01390 - iron ABC transporter permease, at 331,869 to 332,876
_01390
CA264_01395: CA264_01395 - 6-carboxytetrahydropterin synthase QueD, at 332,877 to 333,299
_01395
CA264_01400: CA264_01400 - lipid-A-disaccharide synthase, at 333,373 to 334,494
_01400
Position (kb) 332
333
334 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 331.884 kb on + strand at 331.891 kb on + strand at 331.891 kb on + strand at 331.969 kb on + strand at 332.048 kb on - strand, within CA264_01390 at 332.048 kb on - strand, within CA264_01390 at 332.107 kb on + strand, within CA264_01390 at 332.108 kb on - strand, within CA264_01390 at 332.112 kb on - strand, within CA264_01390 at 332.112 kb on - strand, within CA264_01390 at 332.131 kb on - strand, within CA264_01390 at 332.333 kb on + strand, within CA264_01390 at 332.353 kb on + strand, within CA264_01390 at 332.353 kb on + strand, within CA264_01390 at 332.354 kb on - strand, within CA264_01390 at 332.354 kb on - strand, within CA264_01390 at 332.354 kb on - strand, within CA264_01390 at 332.527 kb on + strand, within CA264_01390 at 332.527 kb on + strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.660 kb on + strand, within CA264_01390 at 332.741 kb on + strand, within CA264_01390 at 332.807 kb on - strand at 332.836 kb on + strand at 332.874 kb on + strand at 332.954 kb on + strand, within CA264_01395 at 333.003 kb on + strand, within CA264_01395 at 333.004 kb on - strand, within CA264_01395 at 333.116 kb on + strand, within CA264_01395 at 333.259 kb on - strand at 333.281 kb on - strand at 333.285 kb on + strand at 333.298 kb on - strand at 333.321 kb on + strand at 333.334 kb on + strand at 333.344 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 331,884 + -0.2 331,891 + -1.9 331,891 + -2.3 331,969 + -0.5 332,048 - CA264_01390 0.18 -2.9 332,048 - CA264_01390 0.18 -1.5 332,107 + CA264_01390 0.24 -0.3 332,108 - CA264_01390 0.24 -5.7 332,112 - CA264_01390 0.24 -3.2 332,112 - CA264_01390 0.24 -0.9 332,131 - CA264_01390 0.26 -4.1 332,333 + CA264_01390 0.46 -2.9 332,353 + CA264_01390 0.48 -2.1 332,353 + CA264_01390 0.48 -3.7 332,354 - CA264_01390 0.48 -2.1 332,354 - CA264_01390 0.48 -1.4 332,354 - CA264_01390 0.48 -3.3 332,527 + CA264_01390 0.65 -0.1 332,527 + CA264_01390 0.65 -2.0 332,528 - CA264_01390 0.65 -3.6 332,528 - CA264_01390 0.65 -3.1 332,660 + CA264_01390 0.78 -1.3 332,741 + CA264_01390 0.87 -1.8 332,807 - -2.6 332,836 + -1.4 332,874 + -1.4 332,954 + CA264_01395 0.18 -2.2 333,003 + CA264_01395 0.30 -3.2 333,004 - CA264_01395 0.30 +0.4 333,116 + CA264_01395 0.57 -3.4 333,259 - -1.3 333,281 - -0.9 333,285 + -2.8 333,298 - -1.3 333,321 + -4.2 333,334 + -4.7 333,344 + -3.4
Or see this region's nucleotide sequence