Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00450 and PS417_00455 are separated by 376 nucleotides PS417_00455 and PS417_00460 are separated by 79 nucleotides PS417_00460 and PS417_00465 are separated by 2 nucleotides
PS417_00450: PS417_00450 - chemotaxis protein CheY, at 89,226 to 90,572
_00450
PS417_00455: PS417_00455 - hypothetical protein, at 90,949 to 91,233
_00455
PS417_00460: PS417_00460 - membrane protein, at 91,313 to 91,477
_00460
PS417_00465: PS417_00465 - hypothetical protein, at 91,480 to 91,947
_00465
Position (kb)
90
91
92 Strain fitness (log2 ratio)
-2
-1
0
1 at 90.153 kb on + strand, within PS417_00450 at 90.154 kb on - strand, within PS417_00450 at 90.324 kb on + strand, within PS417_00450 at 90.475 kb on + strand at 90.475 kb on + strand at 90.475 kb on + strand at 90.476 kb on - strand at 90.535 kb on - strand at 90.589 kb on - strand at 90.594 kb on - strand at 90.594 kb on - strand at 90.610 kb on - strand at 90.643 kb on - strand at 90.675 kb on + strand at 90.675 kb on + strand at 90.676 kb on - strand at 90.676 kb on - strand at 90.676 kb on - strand at 90.692 kb on - strand at 90.729 kb on + strand at 90.730 kb on - strand at 90.908 kb on + strand at 90.908 kb on + strand at 90.909 kb on - strand at 90.925 kb on - strand at 90.981 kb on - strand, within PS417_00455 at 91.143 kb on - strand, within PS417_00455 at 91.143 kb on - strand, within PS417_00455 at 91.231 kb on + strand at 91.232 kb on - strand at 91.274 kb on - strand at 91.283 kb on - strand at 91.289 kb on + strand at 91.289 kb on + strand at 91.300 kb on - strand at 91.714 kb on + strand at 91.714 kb on + strand, within PS417_00465 at 91.714 kb on + strand at 91.715 kb on - strand, within PS417_00465 at 91.715 kb on - strand, within PS417_00465 at 91.801 kb on + strand, within PS417_00465 at 91.801 kb on + strand, within PS417_00465 at 91.802 kb on - strand, within PS417_00465 at 91.843 kb on - strand, within PS417_00465 at 91.935 kb on + strand at 91.936 kb on - strand at 91.936 kb on - strand at 91.942 kb on + strand at 91.942 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.946 kb on - strand at 91.946 kb on - strand at 91.946 kb on - strand at 91.946 kb on - strand at 91.946 kb on - strand at 92.090 kb on + strand at 92.090 kb on + strand at 92.185 kb on + strand at 92.207 kb on + strand at 92.207 kb on + strand at 92.207 kb on + strand at 92.207 kb on + strand at 92.208 kb on - strand at 92.208 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 90,153 + PS417_00450 0.69 -1.8 90,154 - PS417_00450 0.69 -0.1 90,324 + PS417_00450 0.82 -0.5 90,475 + +0.6 90,475 + +0.5 90,475 + +0.6 90,476 - +0.6 90,535 - +0.5 90,589 - +0.0 90,594 - -0.4 90,594 - -1.2 90,610 - -0.8 90,643 - +1.0 90,675 + -0.8 90,675 + -0.4 90,676 - -2.1 90,676 - -0.1 90,676 - +0.3 90,692 - +0.2 90,729 + -0.7 90,730 - +0.3 90,908 + -1.7 90,908 + +0.5 90,909 - +0.2 90,925 - +0.4 90,981 - PS417_00455 0.11 -0.5 91,143 - PS417_00455 0.68 -1.1 91,143 - PS417_00455 0.68 -1.0 91,231 + -0.4 91,232 - -0.1 91,274 - +0.3 91,283 - -0.1 91,289 + -0.6 91,289 + -0.3 91,300 - +0.5 91,714 + -0.8 91,714 + PS417_00465 0.50 -0.4 91,714 + -0.8 91,715 - PS417_00465 0.50 -0.3 91,715 - PS417_00465 0.50 +0.3 91,801 + PS417_00465 0.69 +0.1 91,801 + PS417_00465 0.69 -0.6 91,802 - PS417_00465 0.69 -0.3 91,843 - PS417_00465 0.78 -0.4 91,935 + -0.0 91,936 - +0.7 91,936 - -0.4 91,942 + -0.1 91,942 + -0.3 91,945 + -0.3 91,945 + -0.3 91,945 + -0.2 91,945 + -0.6 91,945 + -0.3 91,946 - -0.4 91,946 - -0.1 91,946 - -0.5 91,946 - +1.2 91,946 - -0.0 92,090 + -0.2 92,090 + -0.6 92,185 + -0.0 92,207 + -0.9 92,207 + -1.5 92,207 + -0.3 92,207 + +0.0 92,208 - -0.2 92,208 - +0.1
Or see this region's nucleotide sequence