Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00040 and PS417_00045 are separated by 182 nucleotides PS417_00045 and PS417_00050 are separated by 82 nucleotides PS417_00050 and PS417_00055 are separated by 5 nucleotides
PS417_00040: PS417_00040 - ATPase, at 8,436 to 10,715
_00040
PS417_00045: PS417_00045 - glycerol acyltransferase, at 10,898 to 11,668
_00045
PS417_00050: PS417_00050 - histidinol phosphatase, at 11,751 to 12,284
_00050
PS417_00055: PS417_00055 - glycine-tRNA synthetase subunit beta, at 12,290 to 14,344
_00055
Position (kb)
10
11
12 Strain fitness (log2 ratio)
-1
0
1
2 at 9.935 kb on - strand, within PS417_00040 at 9.935 kb on - strand, within PS417_00040 at 10.043 kb on + strand, within PS417_00040 at 10.175 kb on - strand, within PS417_00040 at 10.175 kb on - strand, within PS417_00040 at 10.275 kb on - strand, within PS417_00040 at 10.275 kb on - strand, within PS417_00040 at 10.275 kb on - strand, within PS417_00040 at 10.303 kb on + strand, within PS417_00040 at 10.323 kb on - strand, within PS417_00040 at 10.328 kb on + strand, within PS417_00040 at 10.328 kb on + strand, within PS417_00040 at 10.434 kb on + strand, within PS417_00040 at 10.435 kb on - strand, within PS417_00040 at 10.435 kb on - strand, within PS417_00040 at 10.472 kb on + strand, within PS417_00040 at 10.627 kb on + strand at 10.741 kb on - strand at 10.900 kb on - strand at 10.900 kb on - strand at 11.028 kb on + strand, within PS417_00045 at 11.679 kb on - strand at 11.679 kb on - strand at 11.753 kb on - strand at 11.763 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 9,935 - PS417_00040 0.66 +0.9 9,935 - PS417_00040 0.66 +1.5 10,043 + PS417_00040 0.70 +1.5 10,175 - PS417_00040 0.76 -0.1 10,175 - PS417_00040 0.76 -0.3 10,275 - PS417_00040 0.81 +0.1 10,275 - PS417_00040 0.81 +1.9 10,275 - PS417_00040 0.81 -0.1 10,303 + PS417_00040 0.82 +0.5 10,323 - PS417_00040 0.83 +0.3 10,328 + PS417_00040 0.83 -0.1 10,328 + PS417_00040 0.83 -0.3 10,434 + PS417_00040 0.88 +0.0 10,435 - PS417_00040 0.88 +0.2 10,435 - PS417_00040 0.88 -0.1 10,472 + PS417_00040 0.89 -0.4 10,627 + +0.3 10,741 - +0.2 10,900 - +2.2 10,900 - +1.3 11,028 + PS417_00045 0.17 -0.6 11,679 - -0.3 11,679 - -0.0 11,753 - -0.3 11,763 - -0.1
Or see this region's nucleotide sequence