Strain Fitness in Pseudomonas simiae WCS417 around PS417_27870
Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.06 vol% |
---|---|---|---|---|---|
remove | |||||
6,005,938 | + | -0.2 | |||
6,005,955 | + | -1.9 | |||
6,005,956 | - | -2.1 | |||
6,005,956 | - | -1.1 | |||
6,006,305 | + | PS417_27865 | 0.40 | -1.8 | |
6,006,305 | + | PS417_27865 | 0.40 | -1.9 | |
6,006,306 | - | PS417_27865 | 0.40 | -2.3 | |
6,006,306 | - | PS417_27865 | 0.40 | -1.2 | |
6,006,857 | + | +0.0 | |||
6,006,857 | + | -1.0 | |||
6,006,857 | + | -1.2 | |||
6,007,246 | + | PS417_27870 | 0.18 | -1.2 | |
6,007,247 | - | PS417_27870 | 0.18 | +0.4 | |
6,008,119 | - | PS417_27870 | 0.60 | -1.1 | |
6,008,321 | - | PS417_27870 | 0.70 | -1.6 | |
6,008,383 | + | PS417_27870 | 0.73 | -0.6 | |
6,008,384 | - | PS417_27870 | 0.73 | -0.4 | |
6,008,526 | - | PS417_27870 | 0.80 | -0.2 | |
6,008,831 | + | -1.8 | |||
6,008,957 | - | -0.9 | |||
6,008,978 | + | -0.4 | |||
6,009,007 | + | -0.1 | |||
6,009,038 | + | +0.3 | |||
6,009,038 | + | +3.2 | |||
6,009,039 | - | +0.6 | |||
6,009,039 | - | +0.0 | |||
6,009,039 | - | +1.3 | |||
6,009,039 | - | +0.2 | |||
6,009,052 | + | +0.4 | |||
6,009,207 | + | +1.2 | |||
6,009,208 | - | -0.0 | |||
6,009,401 | + | PS417_27875 | 0.24 | +0.7 | |
6,009,791 | + | PS417_27875 | 0.51 | +0.6 | |
6,009,791 | + | PS417_27875 | 0.51 | +0.2 |
Or see this region's nucleotide sequence